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Repository revision

Revision: 2:c2a356708570

Repository 'sharplabtool'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/xuebing/sharplabtool

Linear Models: tool metadata

Miscellaneous

Name: Linear Models:

Description: for genotype data

Id: rgGLM1

Guid: toolshed.g2.bx.psu.edu/repos/xuebing/sharplabtool/rgGLM1/0.2

Version: 0.2

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/xuebing/sharplabtool/rgGLM1/0.2 (this tool)

rgGLM1

Requirements (dependencies defined in the <requirements> tag set)

No requirements defined

Functional tests

name

inputs

outputs

required files

Test-1

i: tinywga
phef: tinywga
title: rgGLMtest1
predvar: c1
covar: None
inter: 0
cond:
gender: 0
mind: 1.0
geno: 1.0
maf: 0.0
logistic: 0

out_file1: rgGLMtest1_GLM.xls
logf: rgGLMtest1_GLM_log.txt
gffout: rgGLMtest1_GLM_topTable.gff

tinywga
tinywga
rgGLMtest1_GLM.xls
rgGLMtest1_GLM_log.txt
rgGLMtest1_GLM_topTable.gff