Repository revision
5:c3cc24bc2dee

Repository 'deeptools_plot_heatmap'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_heatmap

plotHeatmap tool metadata
Miscellaneous
plotHeatmap
creates a heatmap for score distributions across genomic regions
deeptools_plot_heatmap
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_heatmap/deeptools_plot_heatmap/2.2.2.0
2.2.2.0
plotHeatmap --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_heatmap/deeptools_plot_heatmap/2.2.3.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_heatmap/deeptools_plot_heatmap/2.2.2.0 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_heatmap/deeptools_plot_heatmap/2.1.0.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_heatmap/deeptools_plot_heatmap/2.0.1.0
deeptools_plot_heatmap
Requirements (dependencies defined in the <requirements> tag set)
name version type
python 2.7.10 package
plotHeatmap not provided binary
deepTools 2.2.2 package
Functional tests
name inputs outputs required files
Test-1 matrixFile: computeMatrix_result1.gz
outFileName: heatmapper_result1.png
computeMatrix_result1.gz
heatmapper_result1.png
Test-2 advancedOpt|whatToShow: heatmap and colorbar
advancedOpt|showAdvancedOpt: yes
matrixFile: computeMatrix_result1.gz
outFileName: heatmapper_result2.png
computeMatrix_result1.gz
heatmapper_result2.png