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comparison ITSx_db/HMMs/H.hmm @ 0:57e76d405a97 draft default tip

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date Mon, 14 Mar 2016 16:15:08 -0400
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-1:000000000000 0:57e76d405a97
1 HMMER3/b [3.0 | March 2010]
2 NAME 3_End_Rhodophyta_58S_end_four_long
3 LENG 45
4 ALPH DNA
5 RF no
6 CS no
7 MAP yes
8 DATE Wed Jan 25 21:56:19 2012
9 NSEQ 2
10 EFFN 2.000000
11 CKSUM 3310020795
12 STATS LOCAL MSV -7.3962 0.72785
13 STATS LOCAL VITERBI -8.3431 0.72785
14 STATS LOCAL FORWARD -3.4147 0.72785
15 HMM A C G T
16 m->m m->i m->d i->m i->i d->m d->d
17 COMPO 1.39505 1.59495 1.20617 1.38662
18 1.38629 1.38629 1.38629 1.38629
19 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
20 1 2.53331 3.02441 0.20344 2.88069 1 - -
21 1.38629 1.38629 1.38629 1.38629
22 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23 2 2.81865 0.23582 2.88868 2.35662 2 - -
24 1.38629 1.38629 1.38629 1.38629
25 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26 3 2.53331 3.02441 0.20344 2.88069 3 - -
27 1.38629 1.38629 1.38629 1.38629
28 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29 4 2.81865 0.23582 2.88868 2.35662 4 - -
30 1.38629 1.38629 1.38629 1.38629
31 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32 5 2.57915 2.25909 2.64442 0.28946 5 - -
33 1.38629 1.38629 1.38629 1.38629
34 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35 6 2.81865 0.23582 2.88868 2.35662 6 - -
36 1.38629 1.38629 1.38629 1.38629
37 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
38 7 2.57915 2.25909 2.64442 0.28946 7 - -
39 1.38629 1.38629 1.38629 1.38629
40 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41 8 2.81865 0.23582 2.88868 2.35662 8 - -
42 1.38629 1.38629 1.38629 1.38629
43 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
44 9 2.53331 3.02441 0.20344 2.88069 9 - -
45 1.38629 1.38629 1.38629 1.38629
46 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47 10 2.53331 3.02441 0.20344 2.88069 10 - -
48 1.38629 1.38629 1.38629 1.38629
49 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
50 11 2.53331 3.02441 0.20344 2.88069 11 - -
51 1.38629 1.38629 1.38629 1.38629
52 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53 12 2.57915 2.25909 2.64442 0.28946 12 - -
54 1.38629 1.38629 1.38629 1.38629
55 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
56 13 0.23862 2.84929 2.43386 2.70756 13 - -
57 1.38629 1.38629 1.38629 1.38629
58 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
59 14 0.23862 2.84929 2.43386 2.70756 14 - -
60 1.38629 1.38629 1.38629 1.38629
61 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
62 15 2.57915 2.25909 2.64442 0.28946 15 - -
63 1.38629 1.38629 1.38629 1.38629
64 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
65 16 2.81865 0.23582 2.88868 2.35662 16 - -
66 1.38629 1.38629 1.38629 1.38629
67 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
68 17 2.81865 0.23582 2.88868 2.35662 17 - -
69 1.38629 1.38629 1.38629 1.38629
70 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
71 18 2.57915 2.25909 2.64442 0.28946 18 - -
72 1.38629 1.38629 1.38629 1.38629
73 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
74 19 2.53331 3.02441 0.20344 2.88069 19 - -
75 1.38629 1.38629 1.38629 1.38629
76 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
77 20 2.53331 3.02441 0.20344 2.88069 20 - -
78 1.38629 1.38629 1.38629 1.38629
79 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
80 21 2.53331 3.02441 0.20344 2.88069 21 - -
81 1.38629 1.38629 1.38629 1.38629
82 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
83 22 0.23862 2.84929 2.43386 2.70756 22 - -
84 1.38629 1.38629 1.38629 1.38629
85 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
86 23 2.53331 3.02441 0.20344 2.88069 23 - -
87 1.38629 1.38629 1.38629 1.38629
88 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
89 24 2.81865 0.23582 2.88868 2.35662 24 - -
90 1.38629 1.38629 1.38629 1.38629
91 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
92 25 0.23862 2.84929 2.43386 2.70756 25 - -
93 1.38629 1.38629 1.38629 1.38629
94 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
95 26 2.57915 2.25909 2.64442 0.28946 26 - -
96 1.38629 1.38629 1.38629 1.38629
97 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
98 27 2.53331 3.02441 0.20344 2.88069 27 - -
99 1.38629 1.38629 1.38629 1.38629
100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
101 28 2.57915 2.25909 2.64442 0.28946 28 - -
102 1.38629 1.38629 1.38629 1.38629
103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
104 29 2.81865 0.23582 2.88868 2.35662 29 - -
105 1.38629 1.38629 1.38629 1.38629
106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
107 30 2.57915 2.25909 2.64442 0.28946 30 - -
108 1.38629 1.38629 1.38629 1.38629
109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
110 31 2.53331 3.02441 0.20344 2.88069 31 - -
111 1.38629 1.38629 1.38629 1.38629
112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
113 32 2.57915 2.25909 2.64442 0.28946 32 - -
114 1.38629 1.38629 1.38629 1.38629
115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
116 33 2.57915 2.25909 2.64442 0.28946 33 - -
117 1.38629 1.38629 1.38629 1.38629
118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
119 34 2.57915 2.25909 2.64442 0.28946 34 - -
120 1.38629 1.38629 1.38629 1.38629
121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
122 35 2.53331 3.02441 0.20344 2.88069 35 - -
123 1.38629 1.38629 1.38629 1.38629
124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
125 36 0.23862 2.84929 2.43386 2.70756 36 - -
126 1.38629 1.38629 1.38629 1.38629
127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
128 37 2.53331 3.02441 0.20344 2.88069 37 - -
129 1.38629 1.38629 1.38629 1.38629
130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
131 38 2.53331 3.02441 0.20344 2.88069 38 - -
132 1.38629 1.38629 1.38629 1.38629
133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
134 39 0.23862 2.84929 2.43386 2.70756 39 - -
135 1.38629 1.38629 1.38629 1.38629
136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
137 40 0.23862 2.84929 2.43386 2.70756 40 - -
138 1.38629 1.38629 1.38629 1.38629
139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
140 41 0.23862 2.84929 2.43386 2.70756 41 - -
141 1.38629 1.38629 1.38629 1.38629
142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
143 42 0.23862 2.84929 2.43386 2.70756 42 - -
144 1.38629 1.38629 1.38629 1.38629
145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
146 43 0.23862 2.84929 2.43386 2.70756 43 - -
147 1.38629 1.38629 1.38629 1.38629
148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
149 44 2.57915 2.25909 2.64442 0.28946 44 - -
150 1.38629 1.38629 1.38629 1.38629
151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
152 45 0.23862 2.84929 2.43386 2.70756 45 - -
153 1.38629 1.38629 1.38629 1.38629
154 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
155 //
156 HMMER3/b [3.0 | March 2010]
157 NAME 3_End_Rhodophyta_58S_end_one_long
158 LENG 45
159 ALPH DNA
160 RF no
161 CS no
162 MAP yes
163 DATE Wed Jan 25 21:55:52 2012
164 NSEQ 4
165 EFFN 3.332031
166 CKSUM 3304563817
167 STATS LOCAL MSV -8.0466 0.71932
168 STATS LOCAL VITERBI -7.7427 0.71932
169 STATS LOCAL FORWARD -4.1192 0.71932
170 HMM A C G T
171 m->m m->i m->d i->m i->i d->m d->d
172 COMPO 1.92744 1.42765 1.08593 1.28366
173 1.38629 1.38629 1.38629 1.38629
174 0.03682 4.01314 4.01314 1.46634 0.26236 0.00000 *
175 1 2.94961 3.59079 0.11683 3.49577 1 - -
176 1.38629 1.38629 1.38629 1.38629
177 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
178 2 3.43655 0.12980 3.48587 2.83150 2 - -
179 1.38629 1.38629 1.38629 1.38629
180 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
181 3 2.94961 3.59079 0.11683 3.49577 3 - -
182 1.38629 1.38629 1.38629 1.38629
183 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
184 4 3.43655 0.12980 3.48587 2.83150 4 - -
185 1.38629 1.38629 1.38629 1.38629
186 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
187 5 3.09163 2.59706 3.13967 0.17819 5 - -
188 1.38629 1.38629 1.38629 1.38629
189 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
190 6 3.43655 0.12980 3.48587 2.83150 6 - -
191 1.38629 1.38629 1.38629 1.38629
192 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
193 7 2.94961 3.59079 0.11683 3.49577 7 - -
194 1.38629 1.38629 1.38629 1.38629
195 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
196 8 3.43655 0.12980 3.48587 2.83150 8 - -
197 1.38629 1.38629 1.38629 1.38629
198 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
199 9 2.94961 3.59079 0.11683 3.49577 9 - -
200 1.38629 1.38629 1.38629 1.38629
201 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
202 10 2.94961 3.59079 0.11683 3.49577 10 - -
203 1.38629 1.38629 1.38629 1.38629
204 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
205 11 2.94961 3.59079 0.11683 3.49577 11 - -
206 1.38629 1.38629 1.38629 1.38629
207 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
208 12 3.09163 2.59706 3.13967 0.17819 12 - -
209 1.38629 1.38629 1.38629 1.38629
210 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
211 13 0.14150 3.38325 2.80387 3.28520 13 - -
212 1.38629 1.38629 1.38629 1.38629
213 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
214 14 0.14150 3.38325 2.80387 3.28520 14 - -
215 1.38629 1.38629 1.38629 1.38629
216 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
217 15 3.09163 2.59706 3.13967 0.17819 15 - -
218 1.38629 1.38629 1.38629 1.38629
219 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
220 16 3.43655 0.12980 3.48587 2.83150 16 - -
221 1.38629 1.38629 1.38629 1.38629
222 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
223 17 3.43655 0.12980 3.48587 2.83150 17 - -
224 1.38629 1.38629 1.38629 1.38629
225 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
226 18 3.09163 2.59706 3.13967 0.17819 18 - -
227 1.38629 1.38629 1.38629 1.38629
228 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
229 19 2.94961 3.59079 0.11683 3.49577 19 - -
230 1.38629 1.38629 1.38629 1.38629
231 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
232 20 3.43655 0.12980 3.48587 2.83150 20 - -
233 1.38629 1.38629 1.38629 1.38629
234 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
235 21 2.94961 3.59079 0.11683 3.49577 21 - -
236 1.38629 1.38629 1.38629 1.38629
237 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
238 22 0.14150 3.38325 2.80387 3.28520 22 - -
239 1.38629 1.38629 1.38629 1.38629
240 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
241 23 2.94961 3.59079 0.11683 3.49577 23 - -
242 1.38629 1.38629 1.38629 1.38629
243 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
244 24 3.43655 0.12980 3.48587 2.83150 24 - -
245 1.38629 1.38629 1.38629 1.38629
246 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
247 25 0.14150 3.38325 2.80387 3.28520 25 - -
248 1.38629 1.38629 1.38629 1.38629
249 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
250 26 2.94961 3.59079 0.11683 3.49577 26 - -
251 1.38629 1.38629 1.38629 1.38629
252 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
253 27 2.94961 3.59079 0.11683 3.49577 27 - -
254 1.38629 1.38629 1.38629 1.38629
255 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
256 28 3.09163 2.59706 3.13967 0.17819 28 - -
257 1.38629 1.38629 1.38629 1.38629
258 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
259 29 3.43655 0.12980 3.48587 2.83150 29 - -
260 1.38629 1.38629 1.38629 1.38629
261 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
262 30 3.09163 2.59706 3.13967 0.17819 30 - -
263 1.38629 1.38629 1.38629 1.38629
264 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
265 31 2.94961 3.59079 0.11683 3.49577 31 - -
266 1.38629 1.38629 1.38629 1.38629
267 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
268 32 3.09163 2.59706 3.13967 0.17819 32 - -
269 1.38629 1.38629 1.38629 1.38629
270 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
271 33 3.09163 2.59706 3.13967 0.17819 33 - -
272 1.38629 1.38629 1.38629 1.38629
273 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
274 34 3.09163 2.59706 3.13967 0.17819 34 - -
275 1.38629 1.38629 1.38629 1.38629
276 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
277 35 2.94961 3.59079 0.11683 3.49577 35 - -
278 1.38629 1.38629 1.38629 1.38629
279 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
280 36 0.14150 3.38325 2.80387 3.28520 36 - -
281 1.38629 1.38629 1.38629 1.38629
282 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
283 37 2.94961 3.59079 0.11683 3.49577 37 - -
284 1.38629 1.38629 1.38629 1.38629
285 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
286 38 3.09163 2.59706 3.13967 0.17819 38 - -
287 1.38629 1.38629 1.38629 1.38629
288 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
289 39 2.94961 3.59079 0.11683 3.49577 39 - -
290 1.38629 1.38629 1.38629 1.38629
291 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
292 40 3.09163 2.59706 3.13967 0.17819 40 - -
293 1.38629 1.38629 1.38629 1.38629
294 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
295 41 3.43655 0.12980 3.48587 2.83150 41 - -
296 1.38629 1.38629 1.38629 1.38629
297 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
298 42 3.09163 2.59706 3.13967 0.17819 42 - -
299 1.38629 1.38629 1.38629 1.38629
300 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
301 43 2.94961 3.59079 0.11683 3.49577 43 - -
302 1.38629 1.38629 1.38629 1.38629
303 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
304 44 3.09163 2.59706 3.13967 0.17819 44 - -
305 1.38629 1.38629 1.38629 1.38629
306 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
307 45 2.40704 0.95719 2.47912 0.81615 45 - -
308 1.38629 1.38629 1.38629 1.38629
309 0.01858 3.99490 * 1.46634 0.26236 0.00000 *
310 //
311 HMMER3/b [3.0 | March 2010]
312 NAME 3_End_Rhodophyta_58S_end_three_long
313 LENG 45
314 ALPH DNA
315 RF no
316 CS no
317 MAP yes
318 DATE Wed Jan 25 21:56:09 2012
319 NSEQ 3
320 EFFN 3.000000
321 CKSUM 86740024
322 STATS LOCAL MSV -7.8986 0.72037
323 STATS LOCAL VITERBI -7.8442 0.72037
324 STATS LOCAL FORWARD -4.0185 0.72037
325 HMM A C G T
326 m->m m->i m->d i->m i->i d->m d->d
327 COMPO 1.71607 1.38208 1.25621 1.25722
328 1.38629 1.38629 1.38629 1.38629
329 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
330 1 2.86982 3.47591 0.13017 3.36931 1 - -
331 1.38629 1.38629 1.38629 1.38629
332 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
333 2 3.30705 0.14631 3.36166 2.73626 2 - -
334 1.38629 1.38629 1.38629 1.38629
335 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
336 3 2.86982 3.47591 0.13017 3.36931 3 - -
337 1.38629 1.38629 1.38629 1.38629
338 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
339 4 3.30705 0.14631 3.36166 2.73626 4 - -
340 1.38629 1.38629 1.38629 1.38629
341 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
342 5 2.97980 2.52563 3.03204 0.19727 5 - -
343 1.38629 1.38629 1.38629 1.38629
344 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
345 6 3.30705 0.14631 3.36166 2.73626 6 - -
346 1.38629 1.38629 1.38629 1.38629
347 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
348 7 2.97980 2.52563 3.03204 0.19727 7 - -
349 1.38629 1.38629 1.38629 1.38629
350 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
351 8 3.30705 0.14631 3.36166 2.73626 8 - -
352 1.38629 1.38629 1.38629 1.38629
353 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
354 9 2.86982 3.47591 0.13017 3.36931 9 - -
355 1.38629 1.38629 1.38629 1.38629
356 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
357 10 2.86982 3.47591 0.13017 3.36931 10 - -
358 1.38629 1.38629 1.38629 1.38629
359 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
360 11 2.86982 3.47591 0.13017 3.36931 11 - -
361 1.38629 1.38629 1.38629 1.38629
362 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
363 12 2.97980 2.52563 3.03204 0.19727 12 - -
364 1.38629 1.38629 1.38629 1.38629
365 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
366 13 0.15719 3.27118 2.73043 3.16274 13 - -
367 1.38629 1.38629 1.38629 1.38629
368 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
369 14 0.15719 3.27118 2.73043 3.16274 14 - -
370 1.38629 1.38629 1.38629 1.38629
371 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
372 15 2.97980 2.52563 3.03204 0.19727 15 - -
373 1.38629 1.38629 1.38629 1.38629
374 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
375 16 3.30705 0.14631 3.36166 2.73626 16 - -
376 1.38629 1.38629 1.38629 1.38629
377 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
378 17 3.30705 0.14631 3.36166 2.73626 17 - -
379 1.38629 1.38629 1.38629 1.38629
380 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
381 18 2.97980 2.52563 3.03204 0.19727 18 - -
382 1.38629 1.38629 1.38629 1.38629
383 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
384 19 2.86982 3.47591 0.13017 3.36931 19 - -
385 1.38629 1.38629 1.38629 1.38629
386 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
387 20 0.15719 3.27118 2.73043 3.16274 20 - -
388 1.38629 1.38629 1.38629 1.38629
389 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
390 21 2.86982 3.47591 0.13017 3.36931 21 - -
391 1.38629 1.38629 1.38629 1.38629
392 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
393 22 0.15719 3.27118 2.73043 3.16274 22 - -
394 1.38629 1.38629 1.38629 1.38629
395 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
396 23 2.86982 3.47591 0.13017 3.36931 23 - -
397 1.38629 1.38629 1.38629 1.38629
398 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
399 24 3.30705 0.14631 3.36166 2.73626 24 - -
400 1.38629 1.38629 1.38629 1.38629
401 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
402 25 0.15719 3.27118 2.73043 3.16274 25 - -
403 1.38629 1.38629 1.38629 1.38629
404 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
405 26 2.97980 2.52563 3.03204 0.19727 26 - -
406 1.38629 1.38629 1.38629 1.38629
407 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
408 27 2.86982 3.47591 0.13017 3.36931 27 - -
409 1.38629 1.38629 1.38629 1.38629
410 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
411 28 2.97980 2.52563 3.03204 0.19727 28 - -
412 1.38629 1.38629 1.38629 1.38629
413 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
414 29 3.30705 0.14631 3.36166 2.73626 29 - -
415 1.38629 1.38629 1.38629 1.38629
416 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
417 30 2.97980 2.52563 3.03204 0.19727 30 - -
418 1.38629 1.38629 1.38629 1.38629
419 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
420 31 2.86982 3.47591 0.13017 3.36931 31 - -
421 1.38629 1.38629 1.38629 1.38629
422 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
423 32 2.97980 2.52563 3.03204 0.19727 32 - -
424 1.38629 1.38629 1.38629 1.38629
425 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
426 33 2.97980 2.52563 3.03204 0.19727 33 - -
427 1.38629 1.38629 1.38629 1.38629
428 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
429 34 2.97980 2.52563 3.03204 0.19727 34 - -
430 1.38629 1.38629 1.38629 1.38629
431 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
432 35 2.86982 3.47591 0.13017 3.36931 35 - -
433 1.38629 1.38629 1.38629 1.38629
434 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
435 36 0.15719 3.27118 2.73043 3.16274 36 - -
436 1.38629 1.38629 1.38629 1.38629
437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
438 37 2.86982 3.47591 0.13017 3.36931 37 - -
439 1.38629 1.38629 1.38629 1.38629
440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
441 38 2.97980 2.52563 3.03204 0.19727 38 - -
442 1.38629 1.38629 1.38629 1.38629
443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
444 39 2.86982 3.47591 0.13017 3.36931 39 - -
445 1.38629 1.38629 1.38629 1.38629
446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
447 40 2.97980 2.52563 3.03204 0.19727 40 - -
448 1.38629 1.38629 1.38629 1.38629
449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
450 41 3.30705 0.14631 3.36166 2.73626 41 - -
451 1.38629 1.38629 1.38629 1.38629
452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
453 42 0.15719 3.27118 2.73043 3.16274 42 - -
454 1.38629 1.38629 1.38629 1.38629
455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
456 43 3.30705 0.14631 3.36166 2.73626 43 - -
457 1.38629 1.38629 1.38629 1.38629
458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
459 44 3.30705 0.14631 3.36166 2.73626 44 - -
460 1.38629 1.38629 1.38629 1.38629
461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
462 45 2.97980 2.52563 3.03204 0.19727 45 - -
463 1.38629 1.38629 1.38629 1.38629
464 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
465 //
466 HMMER3/b [3.0 | March 2010]
467 NAME 3_End_Rhodophyta_58S_end_two_long
468 LENG 45
469 ALPH DNA
470 RF no
471 CS no
472 MAP yes
473 DATE Wed Jan 25 21:56:01 2012
474 NSEQ 34
475 EFFN 3.407471
476 CKSUM 2094048478
477 STATS LOCAL MSV -7.3795 0.71932
478 STATS LOCAL VITERBI -7.7183 0.71932
479 STATS LOCAL FORWARD -4.1784 0.71932
480 HMM A C G T
481 m->m m->i m->d i->m i->i d->m d->d
482 COMPO 1.81952 1.29666 1.13881 1.40956
483 1.38629 1.38629 1.38629 1.38629
484 0.03632 4.02668 4.02668 1.46634 0.26236 0.00000 *
485 1 2.96611 3.61484 0.11424 3.52234 1 - -
486 1.38629 1.38629 1.38629 1.38629
487 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
488 2 3.00826 0.25008 3.07015 2.07568 2 - -
489 1.38629 1.38629 1.38629 1.38629
490 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
491 3 2.96611 3.61484 0.11424 3.52234 3 - -
492 1.38629 1.38629 1.38629 1.38629
493 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
494 4 3.46393 0.12659 3.51207 2.85138 4 - -
495 1.38629 1.38629 1.38629 1.38629
496 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
497 5 3.11571 2.61236 3.16282 0.17437 5 - -
498 1.38629 1.38629 1.38629 1.38629
499 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
500 6 3.46393 0.12659 3.51207 2.85138 6 - -
501 1.38629 1.38629 1.38629 1.38629
502 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
503 7 2.67126 3.47362 0.14439 3.37328 7 - -
504 1.38629 1.38629 1.38629 1.38629
505 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
506 8 3.06101 0.23141 3.12147 2.15715 8 - -
507 1.38629 1.38629 1.38629 1.38629
508 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
509 9 2.96611 3.61484 0.11424 3.52234 9 - -
510 1.38629 1.38629 1.38629 1.38629
511 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
512 10 2.96611 3.61484 0.11424 3.52234 10 - -
513 1.38629 1.38629 1.38629 1.38629
514 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
515 11 2.96611 3.61484 0.11424 3.52234 11 - -
516 1.38629 1.38629 1.38629 1.38629
517 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
518 12 2.64465 0.44934 2.71441 1.49311 12 - -
519 1.38629 1.38629 1.38629 1.38629
520 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
521 13 0.13841 3.40703 2.81928 3.31124 13 - -
522 1.38629 1.38629 1.38629 1.38629
523 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
524 14 0.13841 3.40703 2.81928 3.31124 14 - -
525 1.38629 1.38629 1.38629 1.38629
526 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
527 15 3.11571 2.61236 3.16282 0.17437 15 - -
528 1.38629 1.38629 1.38629 1.38629
529 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
530 16 3.46393 0.12659 3.51207 2.85138 16 - -
531 1.38629 1.38629 1.38629 1.38629
532 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
533 17 3.46393 0.12659 3.51207 2.85138 17 - -
534 1.38629 1.38629 1.38629 1.38629
535 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
536 18 3.11571 2.61236 3.16282 0.17437 18 - -
537 1.38629 1.38629 1.38629 1.38629
538 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
539 19 2.96611 3.61484 0.11424 3.52234 19 - -
540 1.38629 1.38629 1.38629 1.38629
541 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
542 20 3.46393 0.12659 3.51207 2.85138 20 - -
543 1.38629 1.38629 1.38629 1.38629
544 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
545 21 2.96611 3.61484 0.11424 3.52234 21 - -
546 1.38629 1.38629 1.38629 1.38629
547 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
548 22 0.13841 3.40703 2.81928 3.31124 22 - -
549 1.38629 1.38629 1.38629 1.38629
550 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
551 23 2.96611 3.61484 0.11424 3.52234 23 - -
552 1.38629 1.38629 1.38629 1.38629
553 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
554 24 3.46393 0.12659 3.51207 2.85138 24 - -
555 1.38629 1.38629 1.38629 1.38629
556 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
557 25 0.13841 3.40703 2.81928 3.31124 25 - -
558 1.38629 1.38629 1.38629 1.38629
559 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
560 26 3.11571 2.61236 3.16282 0.17437 26 - -
561 1.38629 1.38629 1.38629 1.38629
562 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
563 27 2.96611 3.61484 0.11424 3.52234 27 - -
564 1.38629 1.38629 1.38629 1.38629
565 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
566 28 3.11571 2.61236 3.16282 0.17437 28 - -
567 1.38629 1.38629 1.38629 1.38629
568 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
569 29 3.46393 0.12659 3.51207 2.85138 29 - -
570 1.38629 1.38629 1.38629 1.38629
571 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
572 30 3.11571 2.61236 3.16282 0.17437 30 - -
573 1.38629 1.38629 1.38629 1.38629
574 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
575 31 2.96611 3.61484 0.11424 3.52234 31 - -
576 1.38629 1.38629 1.38629 1.38629
577 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
578 32 3.11571 2.61236 3.16282 0.17437 32 - -
579 1.38629 1.38629 1.38629 1.38629
580 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
581 33 3.11571 2.61236 3.16282 0.17437 33 - -
582 1.38629 1.38629 1.38629 1.38629
583 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
584 34 3.11571 2.61236 3.16282 0.17437 34 - -
585 1.38629 1.38629 1.38629 1.38629
586 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
587 35 2.96611 3.61484 0.11424 3.52234 35 - -
588 1.38629 1.38629 1.38629 1.38629
589 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
590 36 0.13841 3.40703 2.81928 3.31124 36 - -
591 1.38629 1.38629 1.38629 1.38629
592 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
593 37 2.96611 3.61484 0.11424 3.52234 37 - -
594 1.38629 1.38629 1.38629 1.38629
595 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
596 38 3.11571 2.61236 3.16282 0.17437 38 - -
597 1.38629 1.38629 1.38629 1.38629
598 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
599 39 2.96611 3.61484 0.11424 3.52234 39 - -
600 1.38629 1.38629 1.38629 1.38629
601 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
602 40 3.11571 2.61236 3.16282 0.17437 40 - -
603 1.38629 1.38629 1.38629 1.38629
604 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
605 41 3.46393 0.12659 3.51207 2.85138 41 - -
606 1.38629 1.38629 1.38629 1.38629
607 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
608 42 3.46393 0.12659 3.51207 2.85138 42 - -
609 1.38629 1.38629 1.38629 1.38629
610 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
611 43 2.96611 3.61484 0.11424 3.52234 43 - -
612 1.38629 1.38629 1.38629 1.38629
613 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
614 44 3.20481 0.18755 3.26108 2.38493 44 - -
615 1.38629 1.38629 1.38629 1.38629
616 0.03632 4.02668 4.02668 1.46634 0.26236 1.09861 0.40547
617 45 0.13841 3.40703 2.81928 3.31124 45 - -
618 1.38629 1.38629 1.38629 1.38629
619 0.01832 4.00869 * 1.46634 0.26236 0.00000 *
620 //
621 HMMER3/b [3.0 | March 2010]
622 NAME 2_5.8_Rhodophyta_58S_start_one_long
623 LENG 45
624 ALPH DNA
625 RF no
626 CS no
627 MAP yes
628 DATE Wed Jan 25 21:42:52 2012
629 NSEQ 4
630 EFFN 3.175781
631 CKSUM 3810186819
632 STATS LOCAL MSV -8.1688 0.71933
633 STATS LOCAL VITERBI -7.7118 0.71933
634 STATS LOCAL FORWARD -4.1218 0.71933
635 HMM A C G T
636 m->m m->i m->d i->m i->i d->m d->d
637 COMPO 1.40693 1.26714 1.31628 1.58309
638 1.38629 1.38629 1.38629 1.38629
639 0.03791 3.98449 3.98449 1.46634 0.26236 0.00000 *
640 1 3.37748 0.13704 3.42926 2.78832 1 - -
641 1.38629 1.38629 1.38629 1.38629
642 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
643 2 2.91360 3.53861 0.12268 3.43825 2 - -
644 1.38629 1.38629 1.38629 1.38629
645 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
646 3 0.14843 3.33206 2.77050 3.22920 3 - -
647 1.38629 1.38629 1.38629 1.38629
648 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
649 4 3.37748 0.13704 3.42926 2.78832 4 - -
650 1.38629 1.38629 1.38629 1.38629
651 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
652 5 3.37748 0.13704 3.42926 2.78832 5 - -
653 1.38629 1.38629 1.38629 1.38629
654 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
655 6 3.37748 0.13704 3.42926 2.78832 6 - -
656 1.38629 1.38629 1.38629 1.38629
657 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
658 7 2.91360 3.53861 0.12268 3.43825 7 - -
659 1.38629 1.38629 1.38629 1.38629
660 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
661 8 3.04021 2.56430 3.09020 0.18668 8 - -
662 1.38629 1.38629 1.38629 1.38629
663 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
664 9 0.14843 3.33206 2.77050 3.22920 9 - -
665 1.38629 1.38629 1.38629 1.38629
666 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
667 10 0.14843 3.33206 2.77050 3.22920 10 - -
668 1.38629 1.38629 1.38629 1.38629
669 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
670 11 3.04021 2.56430 3.09020 0.18668 11 - -
671 1.38629 1.38629 1.38629 1.38629
672 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
673 12 2.91360 3.53861 0.12268 3.43825 12 - -
674 1.38629 1.38629 1.38629 1.38629
675 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
676 13 2.91360 3.53861 0.12268 3.43825 13 - -
677 1.38629 1.38629 1.38629 1.38629
678 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
679 14 3.04021 2.56430 3.09020 0.18668 14 - -
680 1.38629 1.38629 1.38629 1.38629
681 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
682 15 2.91360 3.53861 0.12268 3.43825 15 - -
683 1.38629 1.38629 1.38629 1.38629
684 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
685 16 2.91360 3.53861 0.12268 3.43825 16 - -
686 1.38629 1.38629 1.38629 1.38629
687 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
688 17 0.14843 3.33206 2.77050 3.22920 17 - -
689 1.38629 1.38629 1.38629 1.38629
690 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
691 18 3.04021 2.56430 3.09020 0.18668 18 - -
692 1.38629 1.38629 1.38629 1.38629
693 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
694 19 2.91360 3.53861 0.12268 3.43825 19 - -
695 1.38629 1.38629 1.38629 1.38629
696 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
697 20 3.04021 2.56430 3.09020 0.18668 20 - -
698 1.38629 1.38629 1.38629 1.38629
699 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
700 21 3.37748 0.13704 3.42926 2.78832 21 - -
701 1.38629 1.38629 1.38629 1.38629
702 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
703 22 3.04021 2.56430 3.09020 0.18668 22 - -
704 1.38629 1.38629 1.38629 1.38629
705 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
706 23 3.37748 0.13704 3.42926 2.78832 23 - -
707 1.38629 1.38629 1.38629 1.38629
708 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
709 24 2.91360 3.53861 0.12268 3.43825 24 - -
710 1.38629 1.38629 1.38629 1.38629
711 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
712 25 2.91360 3.53861 0.12268 3.43825 25 - -
713 1.38629 1.38629 1.38629 1.38629
714 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
715 26 3.37748 0.13704 3.42926 2.78832 26 - -
716 1.38629 1.38629 1.38629 1.38629
717 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
718 27 3.04021 2.56430 3.09020 0.18668 27 - -
719 1.38629 1.38629 1.38629 1.38629
720 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
721 28 3.37748 0.13704 3.42926 2.78832 28 - -
722 1.38629 1.38629 1.38629 1.38629
723 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
724 29 3.37748 0.13704 3.42926 2.78832 29 - -
725 1.38629 1.38629 1.38629 1.38629
726 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
727 30 3.37748 0.13704 3.42926 2.78832 30 - -
728 1.38629 1.38629 1.38629 1.38629
729 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
730 31 0.14843 3.33206 2.77050 3.22920 31 - -
731 1.38629 1.38629 1.38629 1.38629
732 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
733 32 3.37748 0.13704 3.42926 2.78832 32 - -
734 1.38629 1.38629 1.38629 1.38629
735 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
736 33 0.14843 3.33206 2.77050 3.22920 33 - -
737 1.38629 1.38629 1.38629 1.38629
738 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
739 34 3.04021 2.56430 3.09020 0.18668 34 - -
740 1.38629 1.38629 1.38629 1.38629
741 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
742 35 3.37748 0.13704 3.42926 2.78832 35 - -
743 1.38629 1.38629 1.38629 1.38629
744 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
745 36 2.91360 3.53861 0.12268 3.43825 36 - -
746 1.38629 1.38629 1.38629 1.38629
747 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
748 37 0.14843 3.33206 2.77050 3.22920 37 - -
749 1.38629 1.38629 1.38629 1.38629
750 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
751 38 3.04021 2.56430 3.09020 0.18668 38 - -
752 1.38629 1.38629 1.38629 1.38629
753 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
754 39 2.91360 3.53861 0.12268 3.43825 39 - -
755 1.38629 1.38629 1.38629 1.38629
756 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
757 40 0.14843 3.33206 2.77050 3.22920 40 - -
758 1.38629 1.38629 1.38629 1.38629
759 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
760 41 0.14843 3.33206 2.77050 3.22920 41 - -
761 1.38629 1.38629 1.38629 1.38629
762 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
763 42 2.91360 3.53861 0.12268 3.43825 42 - -
764 1.38629 1.38629 1.38629 1.38629
765 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
766 43 0.14843 3.33206 2.77050 3.22920 43 - -
767 1.38629 1.38629 1.38629 1.38629
768 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
769 44 0.14843 3.33206 2.77050 3.22920 44 - -
770 1.38629 1.38629 1.38629 1.38629
771 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
772 45 3.37748 0.13704 3.42926 2.78832 45 - -
773 1.38629 1.38629 1.38629 1.38629
774 0.01914 3.96571 * 1.46634 0.26236 0.00000 *
775 //
776 HMMER3/b [3.0 | March 2010]
777 NAME 2_5.8_Rhodophyta_58S_start_three_long
778 LENG 45
779 ALPH DNA
780 RF no
781 CS no
782 MAP yes
783 DATE Wed Jan 25 21:44:17 2012
784 NSEQ 4
785 EFFN 3.324219
786 CKSUM 2806458298
787 STATS LOCAL MSV -8.2402 0.71932
788 STATS LOCAL VITERBI -7.5865 0.71932
789 STATS LOCAL FORWARD -3.9489 0.71932
790 HMM A C G T
791 m->m m->i m->d i->m i->i d->m d->d
792 COMPO 1.16164 1.28185 1.60749 1.56488
793 1.38629 1.38629 1.38629 1.38629
794 0.03688 4.01173 4.01173 1.46634 0.26236 0.00000 *
795 1 2.63347 0.44817 2.70341 1.50328 1 - -
796 1.38629 1.38629 1.38629 1.38629
797 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
798 2 0.14183 3.38076 2.80224 3.28247 2 - -
799 1.38629 1.38629 1.38629 1.38629
800 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
801 3 0.14183 3.38076 2.80224 3.28247 3 - -
802 1.38629 1.38629 1.38629 1.38629
803 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
804 4 3.43368 0.13014 3.48311 2.82941 4 - -
805 1.38629 1.38629 1.38629 1.38629
806 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
807 5 3.08911 2.59546 3.13724 0.17860 5 - -
808 1.38629 1.38629 1.38629 1.38629
809 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
810 6 3.43368 0.13014 3.48311 2.82941 6 - -
811 1.38629 1.38629 1.38629 1.38629
812 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
813 7 3.08911 2.59546 3.13724 0.17860 7 - -
814 1.38629 1.38629 1.38629 1.38629
815 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
816 8 3.43368 0.13014 3.48311 2.82941 8 - -
817 1.38629 1.38629 1.38629 1.38629
818 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
819 9 0.14183 3.38076 2.80224 3.28247 9 - -
820 1.38629 1.38629 1.38629 1.38629
821 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
822 10 0.14183 3.38076 2.80224 3.28247 10 - -
823 1.38629 1.38629 1.38629 1.38629
824 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
825 11 3.43368 0.13014 3.48311 2.82941 11 - -
826 1.38629 1.38629 1.38629 1.38629
827 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
828 12 0.14183 3.38076 2.80224 3.28247 12 - -
829 1.38629 1.38629 1.38629 1.38629
830 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
831 13 0.14183 3.38076 2.80224 3.28247 13 - -
832 1.38629 1.38629 1.38629 1.38629
833 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
834 14 3.43368 0.13014 3.48311 2.82941 14 - -
835 1.38629 1.38629 1.38629 1.38629
836 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
837 15 2.94787 3.58826 0.11710 3.49298 15 - -
838 1.38629 1.38629 1.38629 1.38629
839 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
840 16 2.94787 3.58826 0.11710 3.49298 16 - -
841 1.38629 1.38629 1.38629 1.38629
842 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
843 17 0.14183 3.38076 2.80224 3.28247 17 - -
844 1.38629 1.38629 1.38629 1.38629
845 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
846 18 3.08911 2.59546 3.13724 0.17860 18 - -
847 1.38629 1.38629 1.38629 1.38629
848 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
849 19 0.14183 3.38076 2.80224 3.28247 19 - -
850 1.38629 1.38629 1.38629 1.38629
851 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
852 20 3.08911 2.59546 3.13724 0.17860 20 - -
853 1.38629 1.38629 1.38629 1.38629
854 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
855 21 3.43368 0.13014 3.48311 2.82941 21 - -
856 1.38629 1.38629 1.38629 1.38629
857 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
858 22 3.08911 2.59546 3.13724 0.17860 22 - -
859 1.38629 1.38629 1.38629 1.38629
860 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
861 23 3.08911 2.59546 3.13724 0.17860 23 - -
862 1.38629 1.38629 1.38629 1.38629
863 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
864 24 2.94787 3.58826 0.11710 3.49298 24 - -
865 1.38629 1.38629 1.38629 1.38629
866 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
867 25 2.94787 3.58826 0.11710 3.49298 25 - -
868 1.38629 1.38629 1.38629 1.38629
869 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
870 26 3.43368 0.13014 3.48311 2.82941 26 - -
871 1.38629 1.38629 1.38629 1.38629
872 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
873 27 3.08911 2.59546 3.13724 0.17860 27 - -
874 1.38629 1.38629 1.38629 1.38629
875 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
876 28 3.43368 0.13014 3.48311 2.82941 28 - -
877 1.38629 1.38629 1.38629 1.38629
878 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
879 29 3.08911 2.59546 3.13724 0.17860 29 - -
880 1.38629 1.38629 1.38629 1.38629
881 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
882 30 3.43368 0.13014 3.48311 2.82941 30 - -
883 1.38629 1.38629 1.38629 1.38629
884 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
885 31 2.94787 3.58826 0.11710 3.49298 31 - -
886 1.38629 1.38629 1.38629 1.38629
887 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
888 32 3.43368 0.13014 3.48311 2.82941 32 - -
889 1.38629 1.38629 1.38629 1.38629
890 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
891 33 0.14183 3.38076 2.80224 3.28247 33 - -
892 1.38629 1.38629 1.38629 1.38629
893 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
894 34 0.14183 3.38076 2.80224 3.28247 34 - -
895 1.38629 1.38629 1.38629 1.38629
896 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
897 35 3.43368 0.13014 3.48311 2.82941 35 - -
898 1.38629 1.38629 1.38629 1.38629
899 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
900 36 2.94787 3.58826 0.11710 3.49298 36 - -
901 1.38629 1.38629 1.38629 1.38629
902 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
903 37 0.14183 3.38076 2.80224 3.28247 37 - -
904 1.38629 1.38629 1.38629 1.38629
905 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
906 38 3.08911 2.59546 3.13724 0.17860 38 - -
907 1.38629 1.38629 1.38629 1.38629
908 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
909 39 2.94787 3.58826 0.11710 3.49298 39 - -
910 1.38629 1.38629 1.38629 1.38629
911 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
912 40 0.14183 3.38076 2.80224 3.28247 40 - -
913 1.38629 1.38629 1.38629 1.38629
914 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
915 41 0.14183 3.38076 2.80224 3.28247 41 - -
916 1.38629 1.38629 1.38629 1.38629
917 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
918 42 2.94787 3.58826 0.11710 3.49298 42 - -
919 1.38629 1.38629 1.38629 1.38629
920 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
921 43 0.14183 3.38076 2.80224 3.28247 43 - -
922 1.38629 1.38629 1.38629 1.38629
923 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
924 44 0.14183 3.38076 2.80224 3.28247 44 - -
925 1.38629 1.38629 1.38629 1.38629
926 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
927 45 3.43368 0.13014 3.48311 2.82941 45 - -
928 1.38629 1.38629 1.38629 1.38629
929 0.01861 3.99346 * 1.46634 0.26236 0.00000 *
930 //
931 HMMER3/b [3.0 | March 2010]
932 NAME 2_5.8_Rhodophyta_58S_start_twoa_long
933 LENG 45
934 ALPH DNA
935 RF no
936 CS no
937 MAP yes
938 DATE Wed Jan 25 21:43:01 2012
939 NSEQ 4
940 EFFN 3.363281
941 CKSUM 3693864443
942 STATS LOCAL MSV -8.0312 0.71931
943 STATS LOCAL VITERBI -7.6530 0.71931
944 STATS LOCAL FORWARD -4.6865 0.71931
945 HMM A C G T
946 m->m m->i m->d i->m i->i d->m d->d
947 COMPO 1.30997 1.36794 1.37527 1.50161
948 1.38629 1.38629 1.38629 1.38629
949 0.03661 4.01877 4.01877 1.46634 0.26236 0.00000 *
950 1 0.94201 1.03323 2.14067 1.98979 1 - -
951 1.38629 1.38629 1.38629 1.38629
952 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
953 2 0.14020 3.39317 2.81030 3.29606 2 - -
954 1.38629 1.38629 1.38629 1.38629
955 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
956 3 0.14020 3.39317 2.81030 3.29606 3 - -
957 1.38629 1.38629 1.38629 1.38629
958 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
959 4 3.44798 0.12845 3.49681 2.83981 4 - -
960 1.38629 1.38629 1.38629 1.38629
961 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
962 5 3.10166 2.60344 3.14932 0.17659 5 - -
963 1.38629 1.38629 1.38629 1.38629
964 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
965 6 3.44798 0.12845 3.49681 2.83981 6 - -
966 1.38629 1.38629 1.38629 1.38629
967 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
968 7 2.95651 3.60084 0.11574 3.50687 7 - -
969 1.38629 1.38629 1.38629 1.38629
970 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
971 8 3.10166 2.60344 3.14932 0.17659 8 - -
972 1.38629 1.38629 1.38629 1.38629
973 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
974 9 0.14020 3.39317 2.81030 3.29606 9 - -
975 1.38629 1.38629 1.38629 1.38629
976 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
977 10 0.14020 3.39317 2.81030 3.29606 10 - -
978 1.38629 1.38629 1.38629 1.38629
979 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
980 11 3.44798 0.12845 3.49681 2.83981 11 - -
981 1.38629 1.38629 1.38629 1.38629
982 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
983 12 2.95651 3.60084 0.11574 3.50687 12 - -
984 1.38629 1.38629 1.38629 1.38629
985 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
986 13 2.95651 3.60084 0.11574 3.50687 13 - -
987 1.38629 1.38629 1.38629 1.38629
988 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
989 14 3.10166 2.60344 3.14932 0.17659 14 - -
990 1.38629 1.38629 1.38629 1.38629
991 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
992 15 2.95651 3.60084 0.11574 3.50687 15 - -
993 1.38629 1.38629 1.38629 1.38629
994 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
995 16 2.95651 3.60084 0.11574 3.50687 16 - -
996 1.38629 1.38629 1.38629 1.38629
997 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
998 17 0.14020 3.39317 2.81030 3.29606 17 - -
999 1.38629 1.38629 1.38629 1.38629
1000 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1001 18 3.10166 2.60344 3.14932 0.17659 18 - -
1002 1.38629 1.38629 1.38629 1.38629
1003 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1004 19 2.95651 3.60084 0.11574 3.50687 19 - -
1005 1.38629 1.38629 1.38629 1.38629
1006 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1007 20 3.10166 2.60344 3.14932 0.17659 20 - -
1008 1.38629 1.38629 1.38629 1.38629
1009 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1010 21 3.44798 0.12845 3.49681 2.83981 21 - -
1011 1.38629 1.38629 1.38629 1.38629
1012 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1013 22 3.10166 2.60344 3.14932 0.17659 22 - -
1014 1.38629 1.38629 1.38629 1.38629
1015 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1016 23 3.10166 2.60344 3.14932 0.17659 23 - -
1017 1.38629 1.38629 1.38629 1.38629
1018 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1019 24 2.95651 3.60084 0.11574 3.50687 24 - -
1020 1.38629 1.38629 1.38629 1.38629
1021 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1022 25 2.95651 3.60084 0.11574 3.50687 25 - -
1023 1.38629 1.38629 1.38629 1.38629
1024 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1025 26 3.44798 0.12845 3.49681 2.83981 26 - -
1026 1.38629 1.38629 1.38629 1.38629
1027 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1028 27 3.10166 2.60344 3.14932 0.17659 27 - -
1029 1.38629 1.38629 1.38629 1.38629
1030 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1031 28 3.44798 0.12845 3.49681 2.83981 28 - -
1032 1.38629 1.38629 1.38629 1.38629
1033 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1034 29 3.44798 0.12845 3.49681 2.83981 29 - -
1035 1.38629 1.38629 1.38629 1.38629
1036 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1037 30 3.44798 0.12845 3.49681 2.83981 30 - -
1038 1.38629 1.38629 1.38629 1.38629
1039 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1040 31 0.14020 3.39317 2.81030 3.29606 31 - -
1041 1.38629 1.38629 1.38629 1.38629
1042 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1043 32 3.44798 0.12845 3.49681 2.83981 32 - -
1044 1.38629 1.38629 1.38629 1.38629
1045 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1046 33 0.14020 3.39317 2.81030 3.29606 33 - -
1047 1.38629 1.38629 1.38629 1.38629
1048 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1049 34 3.10166 2.60344 3.14932 0.17659 34 - -
1050 1.38629 1.38629 1.38629 1.38629
1051 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1052 35 3.44798 0.12845 3.49681 2.83981 35 - -
1053 1.38629 1.38629 1.38629 1.38629
1054 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1055 36 2.95651 3.60084 0.11574 3.50687 36 - -
1056 1.38629 1.38629 1.38629 1.38629
1057 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1058 37 0.14020 3.39317 2.81030 3.29606 37 - -
1059 1.38629 1.38629 1.38629 1.38629
1060 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1061 38 3.10166 2.60344 3.14932 0.17659 38 - -
1062 1.38629 1.38629 1.38629 1.38629
1063 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1064 39 2.95651 3.60084 0.11574 3.50687 39 - -
1065 1.38629 1.38629 1.38629 1.38629
1066 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1067 40 0.14020 3.39317 2.81030 3.29606 40 - -
1068 1.38629 1.38629 1.38629 1.38629
1069 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1070 41 0.14020 3.39317 2.81030 3.29606 41 - -
1071 1.38629 1.38629 1.38629 1.38629
1072 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1073 42 2.95651 3.60084 0.11574 3.50687 42 - -
1074 1.38629 1.38629 1.38629 1.38629
1075 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1076 43 0.14020 3.39317 2.81030 3.29606 43 - -
1077 1.38629 1.38629 1.38629 1.38629
1078 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1079 44 0.14020 3.39317 2.81030 3.29606 44 - -
1080 1.38629 1.38629 1.38629 1.38629
1081 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
1082 45 3.44798 0.12845 3.49681 2.83981 45 - -
1083 1.38629 1.38629 1.38629 1.38629
1084 0.01847 4.00063 * 1.46634 0.26236 0.00000 *
1085 //
1086 HMMER3/b [3.0 | March 2010]
1087 NAME 2_5.8_Rhodophyta_58S_start_twob_long
1088 LENG 45
1089 ALPH DNA
1090 RF no
1091 CS no
1092 MAP yes
1093 DATE Wed Jan 25 21:43:07 2012
1094 NSEQ 17
1095 EFFN 3.399170
1096 CKSUM 1249095045
1097 STATS LOCAL MSV -7.3126 0.71931
1098 STATS LOCAL VITERBI -7.5101 0.71931
1099 STATS LOCAL FORWARD -4.2778 0.71931
1100 HMM A C G T
1101 m->m m->i m->d i->m i->i d->m d->d
1102 COMPO 1.26013 1.46710 1.22336 1.65261
1103 1.38629 1.38629 1.38629 1.38629
1104 0.03637 4.02520 4.02520 1.46634 0.26236 0.00000 *
1105 1 0.13874 3.40444 2.81761 3.30841 1 - -
1106 1.38629 1.38629 1.38629 1.38629
1107 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1108 2 0.13874 3.40444 2.81761 3.30841 2 - -
1109 1.38629 1.38629 1.38629 1.38629
1110 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1111 3 0.13874 3.40444 2.81761 3.30841 3 - -
1112 1.38629 1.38629 1.38629 1.38629
1113 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1114 4 3.46095 0.12694 3.50922 2.84922 4 - -
1115 1.38629 1.38629 1.38629 1.38629
1116 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1117 5 3.11308 2.61070 3.16030 0.17478 5 - -
1118 1.38629 1.38629 1.38629 1.38629
1119 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1120 6 3.46095 0.12694 3.50922 2.84922 6 - -
1121 1.38629 1.38629 1.38629 1.38629
1122 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1123 7 2.96432 3.61223 0.11452 3.51946 7 - -
1124 1.38629 1.38629 1.38629 1.38629
1125 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1126 8 3.11308 2.61070 3.16030 0.17478 8 - -
1127 1.38629 1.38629 1.38629 1.38629
1128 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1129 9 2.96432 3.61223 0.11452 3.51946 9 - -
1130 1.38629 1.38629 1.38629 1.38629
1131 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1132 10 0.13874 3.40444 2.81761 3.30841 10 - -
1133 1.38629 1.38629 1.38629 1.38629
1134 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1135 11 3.46095 0.12694 3.50922 2.84922 11 - -
1136 1.38629 1.38629 1.38629 1.38629
1137 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1138 12 2.96432 3.61223 0.11452 3.51946 12 - -
1139 1.38629 1.38629 1.38629 1.38629
1140 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1141 13 2.96432 3.61223 0.11452 3.51946 13 - -
1142 1.38629 1.38629 1.38629 1.38629
1143 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1144 14 3.11308 2.61070 3.16030 0.17478 14 - -
1145 1.38629 1.38629 1.38629 1.38629
1146 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1147 15 2.96432 3.61223 0.11452 3.51946 15 - -
1148 1.38629 1.38629 1.38629 1.38629
1149 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1150 16 2.96432 3.61223 0.11452 3.51946 16 - -
1151 1.38629 1.38629 1.38629 1.38629
1152 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1153 17 0.13874 3.40444 2.81761 3.30841 17 - -
1154 1.38629 1.38629 1.38629 1.38629
1155 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1156 18 3.11308 2.61070 3.16030 0.17478 18 - -
1157 1.38629 1.38629 1.38629 1.38629
1158 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1159 19 2.96432 3.61223 0.11452 3.51946 19 - -
1160 1.38629 1.38629 1.38629 1.38629
1161 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1162 20 3.11308 2.61070 3.16030 0.17478 20 - -
1163 1.38629 1.38629 1.38629 1.38629
1164 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1165 21 3.46095 0.12694 3.50922 2.84922 21 - -
1166 1.38629 1.38629 1.38629 1.38629
1167 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1168 22 3.11308 2.61070 3.16030 0.17478 22 - -
1169 1.38629 1.38629 1.38629 1.38629
1170 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1171 23 0.50827 2.40841 2.29505 1.57141 23 - -
1172 1.38629 1.38629 1.38629 1.38629
1173 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1174 24 2.96432 3.61223 0.11452 3.51946 24 - -
1175 1.38629 1.38629 1.38629 1.38629
1176 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1177 25 2.96432 3.61223 0.11452 3.51946 25 - -
1178 1.38629 1.38629 1.38629 1.38629
1179 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1180 26 3.46095 0.12694 3.50922 2.84922 26 - -
1181 1.38629 1.38629 1.38629 1.38629
1182 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1183 27 3.11308 2.61070 3.16030 0.17478 27 - -
1184 1.38629 1.38629 1.38629 1.38629
1185 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1186 28 3.46095 0.12694 3.50922 2.84922 28 - -
1187 1.38629 1.38629 1.38629 1.38629
1188 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1189 29 3.46095 0.12694 3.50922 2.84922 29 - -
1190 1.38629 1.38629 1.38629 1.38629
1191 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1192 30 0.77807 2.53217 0.99592 2.38768 30 - -
1193 1.38629 1.38629 1.38629 1.38629
1194 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1195 31 2.96432 3.61223 0.11452 3.51946 31 - -
1196 1.38629 1.38629 1.38629 1.38629
1197 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1198 32 3.46095 0.12694 3.50922 2.84922 32 - -
1199 1.38629 1.38629 1.38629 1.38629
1200 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1201 33 0.13874 3.40444 2.81761 3.30841 33 - -
1202 1.38629 1.38629 1.38629 1.38629
1203 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1204 34 0.13874 3.40444 2.81761 3.30841 34 - -
1205 1.38629 1.38629 1.38629 1.38629
1206 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1207 35 3.46095 0.12694 3.50922 2.84922 35 - -
1208 1.38629 1.38629 1.38629 1.38629
1209 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1210 36 2.96432 3.61223 0.11452 3.51946 36 - -
1211 1.38629 1.38629 1.38629 1.38629
1212 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1213 37 0.13874 3.40444 2.81761 3.30841 37 - -
1214 1.38629 1.38629 1.38629 1.38629
1215 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1216 38 3.11308 2.61070 3.16030 0.17478 38 - -
1217 1.38629 1.38629 1.38629 1.38629
1218 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1219 39 2.96432 3.61223 0.11452 3.51946 39 - -
1220 1.38629 1.38629 1.38629 1.38629
1221 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1222 40 0.13874 3.40444 2.81761 3.30841 40 - -
1223 1.38629 1.38629 1.38629 1.38629
1224 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1225 41 0.13874 3.40444 2.81761 3.30841 41 - -
1226 1.38629 1.38629 1.38629 1.38629
1227 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1228 42 2.96432 3.61223 0.11452 3.51946 42 - -
1229 1.38629 1.38629 1.38629 1.38629
1230 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1231 43 0.13874 3.40444 2.81761 3.30841 43 - -
1232 1.38629 1.38629 1.38629 1.38629
1233 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1234 44 0.13874 3.40444 2.81761 3.30841 44 - -
1235 1.38629 1.38629 1.38629 1.38629
1236 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547
1237 45 3.46095 0.12694 3.50922 2.84922 45 - -
1238 1.38629 1.38629 1.38629 1.38629
1239 0.01835 4.00718 * 1.46634 0.26236 0.00000 *
1240 //
1241 HMMER3/b [3.0 | March 2010]
1242 NAME 2_5.8_Rhodophyta_58S_start_twoc_long
1243 LENG 45
1244 ALPH DNA
1245 RF no
1246 CS no
1247 MAP yes
1248 DATE Wed Jan 25 21:43:14 2012
1249 NSEQ 2
1250 EFFN 2.000000
1251 CKSUM 361171468
1252 STATS LOCAL MSV -7.5783 0.72809
1253 STATS LOCAL VITERBI -8.1252 0.72809
1254 STATS LOCAL FORWARD -3.2306 0.72809
1255 HMM A C G T
1256 m->m m->i m->d i->m i->i d->m d->d
1257 COMPO 1.26706 1.29688 1.35098 1.68215
1258 1.38629 1.38629 1.38629 1.38629
1259 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1260 1 2.81865 0.23582 2.88868 2.35662 1 - -
1261 1.38629 1.38629 1.38629 1.38629
1262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1263 2 0.23862 2.84929 2.43386 2.70756 2 - -
1264 1.38629 1.38629 1.38629 1.38629
1265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1266 3 0.23862 2.84929 2.43386 2.70756 3 - -
1267 1.38629 1.38629 1.38629 1.38629
1268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1269 4 2.81865 0.23582 2.88868 2.35662 4 - -
1270 1.38629 1.38629 1.38629 1.38629
1271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1272 5 2.81865 0.23582 2.88868 2.35662 5 - -
1273 1.38629 1.38629 1.38629 1.38629
1274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1275 6 2.81865 0.23582 2.88868 2.35662 6 - -
1276 1.38629 1.38629 1.38629 1.38629
1277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1278 7 0.23862 2.84929 2.43386 2.70756 7 - -
1279 1.38629 1.38629 1.38629 1.38629
1280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1281 8 2.57915 2.25909 2.64442 0.28946 8 - -
1282 1.38629 1.38629 1.38629 1.38629
1283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1284 9 2.53331 3.02441 0.20344 2.88069 9 - -
1285 1.38629 1.38629 1.38629 1.38629
1286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1287 10 0.23862 2.84929 2.43386 2.70756 10 - -
1288 1.38629 1.38629 1.38629 1.38629
1289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1290 11 2.81865 0.23582 2.88868 2.35662 11 - -
1291 1.38629 1.38629 1.38629 1.38629
1292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1293 12 2.53331 3.02441 0.20344 2.88069 12 - -
1294 1.38629 1.38629 1.38629 1.38629
1295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1296 13 2.53331 3.02441 0.20344 2.88069 13 - -
1297 1.38629 1.38629 1.38629 1.38629
1298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1299 14 2.57915 2.25909 2.64442 0.28946 14 - -
1300 1.38629 1.38629 1.38629 1.38629
1301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1302 15 2.53331 3.02441 0.20344 2.88069 15 - -
1303 1.38629 1.38629 1.38629 1.38629
1304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1305 16 2.53331 3.02441 0.20344 2.88069 16 - -
1306 1.38629 1.38629 1.38629 1.38629
1307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1308 17 0.23862 2.84929 2.43386 2.70756 17 - -
1309 1.38629 1.38629 1.38629 1.38629
1310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1311 18 2.57915 2.25909 2.64442 0.28946 18 - -
1312 1.38629 1.38629 1.38629 1.38629
1313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1314 19 2.53331 3.02441 0.20344 2.88069 19 - -
1315 1.38629 1.38629 1.38629 1.38629
1316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1317 20 2.57915 2.25909 2.64442 0.28946 20 - -
1318 1.38629 1.38629 1.38629 1.38629
1319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1320 21 2.81865 0.23582 2.88868 2.35662 21 - -
1321 1.38629 1.38629 1.38629 1.38629
1322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1323 22 2.57915 2.25909 2.64442 0.28946 22 - -
1324 1.38629 1.38629 1.38629 1.38629
1325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1326 23 2.81865 0.23582 2.88868 2.35662 23 - -
1327 1.38629 1.38629 1.38629 1.38629
1328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1329 24 2.53331 3.02441 0.20344 2.88069 24 - -
1330 1.38629 1.38629 1.38629 1.38629
1331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1332 25 2.53331 3.02441 0.20344 2.88069 25 - -
1333 1.38629 1.38629 1.38629 1.38629
1334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1335 26 2.81865 0.23582 2.88868 2.35662 26 - -
1336 1.38629 1.38629 1.38629 1.38629
1337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1338 27 2.57915 2.25909 2.64442 0.28946 27 - -
1339 1.38629 1.38629 1.38629 1.38629
1340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1341 28 2.81865 0.23582 2.88868 2.35662 28 - -
1342 1.38629 1.38629 1.38629 1.38629
1343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1344 29 2.81865 0.23582 2.88868 2.35662 29 - -
1345 1.38629 1.38629 1.38629 1.38629
1346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1347 30 0.23862 2.84929 2.43386 2.70756 30 - -
1348 1.38629 1.38629 1.38629 1.38629
1349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1350 31 0.92825 2.28391 0.95698 2.13014 31 - -
1351 1.38629 1.38629 1.38629 1.38629
1352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1353 32 2.81865 0.23582 2.88868 2.35662 32 - -
1354 1.38629 1.38629 1.38629 1.38629
1355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1356 33 0.23862 2.84929 2.43386 2.70756 33 - -
1357 1.38629 1.38629 1.38629 1.38629
1358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1359 34 0.23862 2.84929 2.43386 2.70756 34 - -
1360 1.38629 1.38629 1.38629 1.38629
1361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1362 35 2.81865 0.23582 2.88868 2.35662 35 - -
1363 1.38629 1.38629 1.38629 1.38629
1364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1365 36 2.53331 3.02441 0.20344 2.88069 36 - -
1366 1.38629 1.38629 1.38629 1.38629
1367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1368 37 0.23862 2.84929 2.43386 2.70756 37 - -
1369 1.38629 1.38629 1.38629 1.38629
1370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1371 38 2.57915 2.25909 2.64442 0.28946 38 - -
1372 1.38629 1.38629 1.38629 1.38629
1373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1374 39 2.53331 3.02441 0.20344 2.88069 39 - -
1375 1.38629 1.38629 1.38629 1.38629
1376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1377 40 0.23862 2.84929 2.43386 2.70756 40 - -
1378 1.38629 1.38629 1.38629 1.38629
1379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1380 41 0.23862 2.84929 2.43386 2.70756 41 - -
1381 1.38629 1.38629 1.38629 1.38629
1382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1383 42 2.53331 3.02441 0.20344 2.88069 42 - -
1384 1.38629 1.38629 1.38629 1.38629
1385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1386 43 0.23862 2.84929 2.43386 2.70756 43 - -
1387 1.38629 1.38629 1.38629 1.38629
1388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1389 44 0.23862 2.84929 2.43386 2.70756 44 - -
1390 1.38629 1.38629 1.38629 1.38629
1391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1392 45 2.81865 0.23582 2.88868 2.35662 45 - -
1393 1.38629 1.38629 1.38629 1.38629
1394 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1395 //
1396 HMMER3/b [3.0 | March 2010]
1397 NAME 2_5.8_Rhodophyta_58S_start_twod_long
1398 LENG 45
1399 ALPH DNA
1400 RF no
1401 CS no
1402 MAP yes
1403 DATE Wed Jan 25 21:43:28 2012
1404 NSEQ 3
1405 EFFN 3.000000
1406 CKSUM 3586106311
1407 STATS LOCAL MSV -8.0967 0.72012
1408 STATS LOCAL VITERBI -7.6587 0.72012
1409 STATS LOCAL FORWARD -4.5849 0.72012
1410 HMM A C G T
1411 m->m m->i m->d i->m i->i d->m d->d
1412 COMPO 1.27863 1.33133 1.37926 1.58138
1413 1.38629 1.38629 1.38629 1.38629
1414 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
1415 1 3.30705 0.14631 3.36166 2.73626 1 - -
1416 1.38629 1.38629 1.38629 1.38629
1417 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1418 2 0.15719 3.27118 2.73043 3.16274 2 - -
1419 1.38629 1.38629 1.38629 1.38629
1420 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1421 3 0.15719 3.27118 2.73043 3.16274 3 - -
1422 1.38629 1.38629 1.38629 1.38629
1423 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1424 4 3.30705 0.14631 3.36166 2.73626 4 - -
1425 1.38629 1.38629 1.38629 1.38629
1426 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1427 5 2.97980 2.52563 3.03204 0.19727 5 - -
1428 1.38629 1.38629 1.38629 1.38629
1429 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1430 6 3.30705 0.14631 3.36166 2.73626 6 - -
1431 1.38629 1.38629 1.38629 1.38629
1432 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1433 7 2.86982 3.47591 0.13017 3.36931 7 - -
1434 1.38629 1.38629 1.38629 1.38629
1435 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1436 8 2.97980 2.52563 3.03204 0.19727 8 - -
1437 1.38629 1.38629 1.38629 1.38629
1438 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1439 9 0.15719 3.27118 2.73043 3.16274 9 - -
1440 1.38629 1.38629 1.38629 1.38629
1441 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1442 10 0.15719 3.27118 2.73043 3.16274 10 - -
1443 1.38629 1.38629 1.38629 1.38629
1444 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1445 11 3.30705 0.14631 3.36166 2.73626 11 - -
1446 1.38629 1.38629 1.38629 1.38629
1447 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1448 12 2.86982 3.47591 0.13017 3.36931 12 - -
1449 1.38629 1.38629 1.38629 1.38629
1450 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1451 13 2.86982 3.47591 0.13017 3.36931 13 - -
1452 1.38629 1.38629 1.38629 1.38629
1453 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1454 14 2.97980 2.52563 3.03204 0.19727 14 - -
1455 1.38629 1.38629 1.38629 1.38629
1456 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1457 15 2.86982 3.47591 0.13017 3.36931 15 - -
1458 1.38629 1.38629 1.38629 1.38629
1459 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1460 16 2.86982 3.47591 0.13017 3.36931 16 - -
1461 1.38629 1.38629 1.38629 1.38629
1462 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1463 17 0.15719 3.27118 2.73043 3.16274 17 - -
1464 1.38629 1.38629 1.38629 1.38629
1465 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1466 18 2.97980 2.52563 3.03204 0.19727 18 - -
1467 1.38629 1.38629 1.38629 1.38629
1468 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1469 19 2.86982 3.47591 0.13017 3.36931 19 - -
1470 1.38629 1.38629 1.38629 1.38629
1471 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1472 20 2.97980 2.52563 3.03204 0.19727 20 - -
1473 1.38629 1.38629 1.38629 1.38629
1474 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1475 21 3.30705 0.14631 3.36166 2.73626 21 - -
1476 1.38629 1.38629 1.38629 1.38629
1477 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1478 22 2.97980 2.52563 3.03204 0.19727 22 - -
1479 1.38629 1.38629 1.38629 1.38629
1480 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1481 23 0.15719 3.27118 2.73043 3.16274 23 - -
1482 1.38629 1.38629 1.38629 1.38629
1483 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1484 24 2.86982 3.47591 0.13017 3.36931 24 - -
1485 1.38629 1.38629 1.38629 1.38629
1486 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1487 25 2.86982 3.47591 0.13017 3.36931 25 - -
1488 1.38629 1.38629 1.38629 1.38629
1489 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1490 26 3.30705 0.14631 3.36166 2.73626 26 - -
1491 1.38629 1.38629 1.38629 1.38629
1492 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1493 27 2.97980 2.52563 3.03204 0.19727 27 - -
1494 1.38629 1.38629 1.38629 1.38629
1495 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1496 28 3.30705 0.14631 3.36166 2.73626 28 - -
1497 1.38629 1.38629 1.38629 1.38629
1498 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1499 29 3.30705 0.14631 3.36166 2.73626 29 - -
1500 1.38629 1.38629 1.38629 1.38629
1501 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1502 30 3.30705 0.14631 3.36166 2.73626 30 - -
1503 1.38629 1.38629 1.38629 1.38629
1504 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1505 31 0.15719 3.27118 2.73043 3.16274 31 - -
1506 1.38629 1.38629 1.38629 1.38629
1507 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1508 32 3.30705 0.14631 3.36166 2.73626 32 - -
1509 1.38629 1.38629 1.38629 1.38629
1510 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1511 33 0.15719 3.27118 2.73043 3.16274 33 - -
1512 1.38629 1.38629 1.38629 1.38629
1513 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1514 34 2.97980 2.52563 3.03204 0.19727 34 - -
1515 1.38629 1.38629 1.38629 1.38629
1516 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1517 35 3.30705 0.14631 3.36166 2.73626 35 - -
1518 1.38629 1.38629 1.38629 1.38629
1519 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1520 36 2.86982 3.47591 0.13017 3.36931 36 - -
1521 1.38629 1.38629 1.38629 1.38629
1522 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1523 37 0.15719 3.27118 2.73043 3.16274 37 - -
1524 1.38629 1.38629 1.38629 1.38629
1525 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1526 38 2.97980 2.52563 3.03204 0.19727 38 - -
1527 1.38629 1.38629 1.38629 1.38629
1528 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1529 39 2.86982 3.47591 0.13017 3.36931 39 - -
1530 1.38629 1.38629 1.38629 1.38629
1531 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1532 40 0.15719 3.27118 2.73043 3.16274 40 - -
1533 1.38629 1.38629 1.38629 1.38629
1534 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1535 41 0.15719 3.27118 2.73043 3.16274 41 - -
1536 1.38629 1.38629 1.38629 1.38629
1537 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1538 42 2.86982 3.47591 0.13017 3.36931 42 - -
1539 1.38629 1.38629 1.38629 1.38629
1540 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1541 43 0.15719 3.27118 2.73043 3.16274 43 - -
1542 1.38629 1.38629 1.38629 1.38629
1543 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1544 44 0.15719 3.27118 2.73043 3.16274 44 - -
1545 1.38629 1.38629 1.38629 1.38629
1546 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1547 45 3.30705 0.14631 3.36166 2.73626 45 - -
1548 1.38629 1.38629 1.38629 1.38629
1549 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
1550 //
1551 HMMER3/b [3.0 | March 2010]
1552 NAME 2_5.8_Rhodophyta_58S_start_twoe_long
1553 LENG 45
1554 ALPH DNA
1555 RF no
1556 CS no
1557 MAP yes
1558 DATE Wed Jan 25 21:43:35 2012
1559 NSEQ 6
1560 EFFN 3.202148
1561 CKSUM 2099097258
1562 STATS LOCAL MSV -8.0529 0.71932
1563 STATS LOCAL VITERBI -7.6277 0.71932
1564 STATS LOCAL FORWARD -4.5099 0.71932
1565 HMM A C G T
1566 m->m m->i m->d i->m i->i d->m d->d
1567 COMPO 1.21596 1.39906 1.37774 1.58670
1568 1.38629 1.38629 1.38629 1.38629
1569 0.03773 3.98938 3.98938 1.46634 0.26236 0.00000 *
1570 1 0.14721 3.34089 2.77627 3.23885 1 - -
1571 1.38629 1.38629 1.38629 1.38629
1572 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1573 2 0.14721 3.34089 2.77627 3.23885 2 - -
1574 1.38629 1.38629 1.38629 1.38629
1575 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1576 3 0.14721 3.34089 2.77627 3.23885 3 - -
1577 1.38629 1.38629 1.38629 1.38629
1578 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1579 4 3.38768 0.13576 3.43904 2.79581 4 - -
1580 1.38629 1.38629 1.38629 1.38629
1581 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1582 5 3.04904 2.56994 3.09869 0.18519 5 - -
1583 1.38629 1.38629 1.38629 1.38629
1584 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1585 6 3.38768 0.13576 3.43904 2.79581 6 - -
1586 1.38629 1.38629 1.38629 1.38629
1587 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1588 7 2.91986 3.54765 0.12164 3.44820 7 - -
1589 1.38629 1.38629 1.38629 1.38629
1590 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1591 8 3.04904 2.56994 3.09869 0.18519 8 - -
1592 1.38629 1.38629 1.38629 1.38629
1593 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1594 9 2.91986 3.54765 0.12164 3.44820 9 - -
1595 1.38629 1.38629 1.38629 1.38629
1596 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1597 10 0.14721 3.34089 2.77627 3.23885 10 - -
1598 1.38629 1.38629 1.38629 1.38629
1599 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1600 11 3.38768 0.13576 3.43904 2.79581 11 - -
1601 1.38629 1.38629 1.38629 1.38629
1602 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1603 12 2.91986 3.54765 0.12164 3.44820 12 - -
1604 1.38629 1.38629 1.38629 1.38629
1605 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1606 13 2.91986 3.54765 0.12164 3.44820 13 - -
1607 1.38629 1.38629 1.38629 1.38629
1608 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1609 14 0.14721 3.34089 2.77627 3.23885 14 - -
1610 1.38629 1.38629 1.38629 1.38629
1611 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1612 15 2.91986 3.54765 0.12164 3.44820 15 - -
1613 1.38629 1.38629 1.38629 1.38629
1614 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1615 16 2.91986 3.54765 0.12164 3.44820 16 - -
1616 1.38629 1.38629 1.38629 1.38629
1617 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1618 17 0.14721 3.34089 2.77627 3.23885 17 - -
1619 1.38629 1.38629 1.38629 1.38629
1620 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1621 18 3.04904 2.56994 3.09869 0.18519 18 - -
1622 1.38629 1.38629 1.38629 1.38629
1623 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1624 19 0.14721 3.34089 2.77627 3.23885 19 - -
1625 1.38629 1.38629 1.38629 1.38629
1626 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1627 20 3.04904 2.56994 3.09869 0.18519 20 - -
1628 1.38629 1.38629 1.38629 1.38629
1629 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1630 21 3.38768 0.13576 3.43904 2.79581 21 - -
1631 1.38629 1.38629 1.38629 1.38629
1632 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1633 22 3.04904 2.56994 3.09869 0.18519 22 - -
1634 1.38629 1.38629 1.38629 1.38629
1635 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1636 23 3.04904 2.56994 3.09869 0.18519 23 - -
1637 1.38629 1.38629 1.38629 1.38629
1638 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1639 24 2.91986 3.54765 0.12164 3.44820 24 - -
1640 1.38629 1.38629 1.38629 1.38629
1641 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1642 25 2.91986 3.54765 0.12164 3.44820 25 - -
1643 1.38629 1.38629 1.38629 1.38629
1644 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1645 26 3.38768 0.13576 3.43904 2.79581 26 - -
1646 1.38629 1.38629 1.38629 1.38629
1647 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1648 27 3.04904 2.56994 3.09869 0.18519 27 - -
1649 1.38629 1.38629 1.38629 1.38629
1650 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1651 28 3.38768 0.13576 3.43904 2.79581 28 - -
1652 1.38629 1.38629 1.38629 1.38629
1653 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1654 29 3.38768 0.13576 3.43904 2.79581 29 - -
1655 1.38629 1.38629 1.38629 1.38629
1656 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1657 30 3.38768 0.13576 3.43904 2.79581 30 - -
1658 1.38629 1.38629 1.38629 1.38629
1659 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1660 31 0.14721 3.34089 2.77627 3.23885 31 - -
1661 1.38629 1.38629 1.38629 1.38629
1662 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1663 32 3.38768 0.13576 3.43904 2.79581 32 - -
1664 1.38629 1.38629 1.38629 1.38629
1665 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1666 33 0.14721 3.34089 2.77627 3.23885 33 - -
1667 1.38629 1.38629 1.38629 1.38629
1668 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1669 34 3.04904 2.56994 3.09869 0.18519 34 - -
1670 1.38629 1.38629 1.38629 1.38629
1671 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1672 35 3.38768 0.13576 3.43904 2.79581 35 - -
1673 1.38629 1.38629 1.38629 1.38629
1674 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1675 36 2.91986 3.54765 0.12164 3.44820 36 - -
1676 1.38629 1.38629 1.38629 1.38629
1677 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1678 37 0.14721 3.34089 2.77627 3.23885 37 - -
1679 1.38629 1.38629 1.38629 1.38629
1680 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1681 38 3.04904 2.56994 3.09869 0.18519 38 - -
1682 1.38629 1.38629 1.38629 1.38629
1683 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1684 39 2.91986 3.54765 0.12164 3.44820 39 - -
1685 1.38629 1.38629 1.38629 1.38629
1686 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1687 40 0.14721 3.34089 2.77627 3.23885 40 - -
1688 1.38629 1.38629 1.38629 1.38629
1689 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1690 41 0.14721 3.34089 2.77627 3.23885 41 - -
1691 1.38629 1.38629 1.38629 1.38629
1692 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1693 42 2.91986 3.54765 0.12164 3.44820 42 - -
1694 1.38629 1.38629 1.38629 1.38629
1695 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1696 43 0.14721 3.34089 2.77627 3.23885 43 - -
1697 1.38629 1.38629 1.38629 1.38629
1698 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1699 44 0.14721 3.34089 2.77627 3.23885 44 - -
1700 1.38629 1.38629 1.38629 1.38629
1701 0.03773 3.98938 3.98938 1.46634 0.26236 1.09861 0.40547
1702 45 3.38768 0.13576 3.43904 2.79581 45 - -
1703 1.38629 1.38629 1.38629 1.38629
1704 0.01904 3.97070 * 1.46634 0.26236 0.00000 *
1705 //
1706 HMMER3/b [3.0 | March 2010]
1707 NAME 2_5.8_Rhodophyta_58S_start_twof_long
1708 LENG 45
1709 ALPH DNA
1710 RF no
1711 CS no
1712 MAP yes
1713 DATE Wed Jan 25 21:43:44 2012
1714 NSEQ 2
1715 EFFN 2.000000
1716 CKSUM 538168776
1717 STATS LOCAL MSV -7.5903 0.72774
1718 STATS LOCAL VITERBI -8.2624 0.72774
1719 STATS LOCAL FORWARD -3.7407 0.72774
1720 HMM A C G T
1721 m->m m->i m->d i->m i->i d->m d->d
1722 COMPO 1.28897 1.34866 1.37416 1.55209
1723 1.38629 1.38629 1.38629 1.38629
1724 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1725 1 2.81865 0.23582 2.88868 2.35662 1 - -
1726 1.38629 1.38629 1.38629 1.38629
1727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1728 2 0.23862 2.84929 2.43386 2.70756 2 - -
1729 1.38629 1.38629 1.38629 1.38629
1730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1731 3 0.23862 2.84929 2.43386 2.70756 3 - -
1732 1.38629 1.38629 1.38629 1.38629
1733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1734 4 2.81865 0.23582 2.88868 2.35662 4 - -
1735 1.38629 1.38629 1.38629 1.38629
1736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1737 5 2.57915 2.25909 2.64442 0.28946 5 - -
1738 1.38629 1.38629 1.38629 1.38629
1739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1740 6 2.81865 0.23582 2.88868 2.35662 6 - -
1741 1.38629 1.38629 1.38629 1.38629
1742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1743 7 2.53331 3.02441 0.20344 2.88069 7 - -
1744 1.38629 1.38629 1.38629 1.38629
1745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1746 8 2.57915 2.25909 2.64442 0.28946 8 - -
1747 1.38629 1.38629 1.38629 1.38629
1748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1749 9 0.23862 2.84929 2.43386 2.70756 9 - -
1750 1.38629 1.38629 1.38629 1.38629
1751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1752 10 0.23862 2.84929 2.43386 2.70756 10 - -
1753 1.38629 1.38629 1.38629 1.38629
1754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1755 11 2.81865 0.23582 2.88868 2.35662 11 - -
1756 1.38629 1.38629 1.38629 1.38629
1757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1758 12 2.53331 3.02441 0.20344 2.88069 12 - -
1759 1.38629 1.38629 1.38629 1.38629
1760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1761 13 2.53331 3.02441 0.20344 2.88069 13 - -
1762 1.38629 1.38629 1.38629 1.38629
1763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1764 14 2.57915 2.25909 2.64442 0.28946 14 - -
1765 1.38629 1.38629 1.38629 1.38629
1766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1767 15 2.53331 3.02441 0.20344 2.88069 15 - -
1768 1.38629 1.38629 1.38629 1.38629
1769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1770 16 2.53331 3.02441 0.20344 2.88069 16 - -
1771 1.38629 1.38629 1.38629 1.38629
1772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1773 17 0.23862 2.84929 2.43386 2.70756 17 - -
1774 1.38629 1.38629 1.38629 1.38629
1775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1776 18 2.57915 2.25909 2.64442 0.28946 18 - -
1777 1.38629 1.38629 1.38629 1.38629
1778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1779 19 2.53331 3.02441 0.20344 2.88069 19 - -
1780 1.38629 1.38629 1.38629 1.38629
1781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1782 20 2.57915 2.25909 2.64442 0.28946 20 - -
1783 1.38629 1.38629 1.38629 1.38629
1784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1785 21 2.81865 0.23582 2.88868 2.35662 21 - -
1786 1.38629 1.38629 1.38629 1.38629
1787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1788 22 2.57915 2.25909 2.64442 0.28946 22 - -
1789 1.38629 1.38629 1.38629 1.38629
1790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1791 23 2.81865 0.23582 2.88868 2.35662 23 - -
1792 1.38629 1.38629 1.38629 1.38629
1793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1794 24 2.53331 3.02441 0.20344 2.88069 24 - -
1795 1.38629 1.38629 1.38629 1.38629
1796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1797 25 2.53331 3.02441 0.20344 2.88069 25 - -
1798 1.38629 1.38629 1.38629 1.38629
1799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1800 26 2.81865 0.23582 2.88868 2.35662 26 - -
1801 1.38629 1.38629 1.38629 1.38629
1802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1803 27 2.57915 2.25909 2.64442 0.28946 27 - -
1804 1.38629 1.38629 1.38629 1.38629
1805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1806 28 2.81865 0.23582 2.88868 2.35662 28 - -
1807 1.38629 1.38629 1.38629 1.38629
1808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1809 29 2.81865 0.23582 2.88868 2.35662 29 - -
1810 1.38629 1.38629 1.38629 1.38629
1811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1812 30 2.57915 2.25909 2.64442 0.28946 30 - -
1813 1.38629 1.38629 1.38629 1.38629
1814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1815 31 0.23862 2.84929 2.43386 2.70756 31 - -
1816 1.38629 1.38629 1.38629 1.38629
1817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1818 32 2.81865 0.23582 2.88868 2.35662 32 - -
1819 1.38629 1.38629 1.38629 1.38629
1820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1821 33 0.23862 2.84929 2.43386 2.70756 33 - -
1822 1.38629 1.38629 1.38629 1.38629
1823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1824 34 0.23862 2.84929 2.43386 2.70756 34 - -
1825 1.38629 1.38629 1.38629 1.38629
1826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1827 35 2.81865 0.23582 2.88868 2.35662 35 - -
1828 1.38629 1.38629 1.38629 1.38629
1829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1830 36 2.53331 3.02441 0.20344 2.88069 36 - -
1831 1.38629 1.38629 1.38629 1.38629
1832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1833 37 0.23862 2.84929 2.43386 2.70756 37 - -
1834 1.38629 1.38629 1.38629 1.38629
1835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1836 38 2.57915 2.25909 2.64442 0.28946 38 - -
1837 1.38629 1.38629 1.38629 1.38629
1838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1839 39 2.53331 3.02441 0.20344 2.88069 39 - -
1840 1.38629 1.38629 1.38629 1.38629
1841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1842 40 0.23862 2.84929 2.43386 2.70756 40 - -
1843 1.38629 1.38629 1.38629 1.38629
1844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1845 41 0.23862 2.84929 2.43386 2.70756 41 - -
1846 1.38629 1.38629 1.38629 1.38629
1847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1848 42 2.53331 3.02441 0.20344 2.88069 42 - -
1849 1.38629 1.38629 1.38629 1.38629
1850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1851 43 0.23862 2.84929 2.43386 2.70756 43 - -
1852 1.38629 1.38629 1.38629 1.38629
1853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1854 44 0.23862 2.84929 2.43386 2.70756 44 - -
1855 1.38629 1.38629 1.38629 1.38629
1856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1857 45 2.81865 0.23582 2.88868 2.35662 45 - -
1858 1.38629 1.38629 1.38629 1.38629
1859 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1860 //
1861 HMMER3/b [3.0 | March 2010]
1862 NAME 2_5.8_Rhodophyta_58S_start_twog_long
1863 LENG 45
1864 ALPH DNA
1865 RF no
1866 CS no
1867 MAP yes
1868 DATE Wed Jan 25 21:43:53 2012
1869 NSEQ 2
1870 EFFN 2.000000
1871 CKSUM 433536473
1872 STATS LOCAL MSV -7.5756 0.72824
1873 STATS LOCAL VITERBI -8.2789 0.72824
1874 STATS LOCAL FORWARD -3.5811 0.72824
1875 HMM A C G T
1876 m->m m->i m->d i->m i->i d->m d->d
1877 COMPO 1.33746 1.38280 1.31433 1.52346
1878 1.38629 1.38629 1.38629 1.38629
1879 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1880 1 2.81865 0.23582 2.88868 2.35662 1 - -
1881 1.38629 1.38629 1.38629 1.38629
1882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1883 2 0.23862 2.84929 2.43386 2.70756 2 - -
1884 1.38629 1.38629 1.38629 1.38629
1885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1886 3 0.23862 2.84929 2.43386 2.70756 3 - -
1887 1.38629 1.38629 1.38629 1.38629
1888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1889 4 2.81865 0.23582 2.88868 2.35662 4 - -
1890 1.38629 1.38629 1.38629 1.38629
1891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1892 5 2.57915 2.25909 2.64442 0.28946 5 - -
1893 1.38629 1.38629 1.38629 1.38629
1894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1895 6 2.81865 0.23582 2.88868 2.35662 6 - -
1896 1.38629 1.38629 1.38629 1.38629
1897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1898 7 0.23862 2.84929 2.43386 2.70756 7 - -
1899 1.38629 1.38629 1.38629 1.38629
1900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1901 8 2.57915 2.25909 2.64442 0.28946 8 - -
1902 1.38629 1.38629 1.38629 1.38629
1903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1904 9 2.53331 3.02441 0.20344 2.88069 9 - -
1905 1.38629 1.38629 1.38629 1.38629
1906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1907 10 0.23862 2.84929 2.43386 2.70756 10 - -
1908 1.38629 1.38629 1.38629 1.38629
1909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1910 11 2.81865 0.23582 2.88868 2.35662 11 - -
1911 1.38629 1.38629 1.38629 1.38629
1912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1913 12 2.53331 3.02441 0.20344 2.88069 12 - -
1914 1.38629 1.38629 1.38629 1.38629
1915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1916 13 2.53331 3.02441 0.20344 2.88069 13 - -
1917 1.38629 1.38629 1.38629 1.38629
1918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1919 14 2.57915 2.25909 2.64442 0.28946 14 - -
1920 1.38629 1.38629 1.38629 1.38629
1921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1922 15 2.53331 3.02441 0.20344 2.88069 15 - -
1923 1.38629 1.38629 1.38629 1.38629
1924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1925 16 2.53331 3.02441 0.20344 2.88069 16 - -
1926 1.38629 1.38629 1.38629 1.38629
1927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1928 17 0.23862 2.84929 2.43386 2.70756 17 - -
1929 1.38629 1.38629 1.38629 1.38629
1930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1931 18 2.57915 2.25909 2.64442 0.28946 18 - -
1932 1.38629 1.38629 1.38629 1.38629
1933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1934 19 2.53331 3.02441 0.20344 2.88069 19 - -
1935 1.38629 1.38629 1.38629 1.38629
1936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1937 20 2.57915 2.25909 2.64442 0.28946 20 - -
1938 1.38629 1.38629 1.38629 1.38629
1939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1940 21 2.81865 0.23582 2.88868 2.35662 21 - -
1941 1.38629 1.38629 1.38629 1.38629
1942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1943 22 2.57915 2.25909 2.64442 0.28946 22 - -
1944 1.38629 1.38629 1.38629 1.38629
1945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1946 23 2.57915 2.25909 2.64442 0.28946 23 - -
1947 1.38629 1.38629 1.38629 1.38629
1948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1949 24 2.53331 3.02441 0.20344 2.88069 24 - -
1950 1.38629 1.38629 1.38629 1.38629
1951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1952 25 2.53331 3.02441 0.20344 2.88069 25 - -
1953 1.38629 1.38629 1.38629 1.38629
1954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1955 26 2.15554 1.00938 2.23102 0.88601 26 - -
1956 1.38629 1.38629 1.38629 1.38629
1957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1958 27 2.57915 2.25909 2.64442 0.28946 27 - -
1959 1.38629 1.38629 1.38629 1.38629
1960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1961 28 2.81865 0.23582 2.88868 2.35662 28 - -
1962 1.38629 1.38629 1.38629 1.38629
1963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1964 29 2.81865 0.23582 2.88868 2.35662 29 - -
1965 1.38629 1.38629 1.38629 1.38629
1966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1967 30 0.23862 2.84929 2.43386 2.70756 30 - -
1968 1.38629 1.38629 1.38629 1.38629
1969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1970 31 2.53331 3.02441 0.20344 2.88069 31 - -
1971 1.38629 1.38629 1.38629 1.38629
1972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1973 32 2.81865 0.23582 2.88868 2.35662 32 - -
1974 1.38629 1.38629 1.38629 1.38629
1975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1976 33 0.23862 2.84929 2.43386 2.70756 33 - -
1977 1.38629 1.38629 1.38629 1.38629
1978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1979 34 0.23862 2.84929 2.43386 2.70756 34 - -
1980 1.38629 1.38629 1.38629 1.38629
1981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1982 35 2.81865 0.23582 2.88868 2.35662 35 - -
1983 1.38629 1.38629 1.38629 1.38629
1984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1985 36 2.53331 3.02441 0.20344 2.88069 36 - -
1986 1.38629 1.38629 1.38629 1.38629
1987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1988 37 0.23862 2.84929 2.43386 2.70756 37 - -
1989 1.38629 1.38629 1.38629 1.38629
1990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1991 38 2.57915 2.25909 2.64442 0.28946 38 - -
1992 1.38629 1.38629 1.38629 1.38629
1993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1994 39 2.53331 3.02441 0.20344 2.88069 39 - -
1995 1.38629 1.38629 1.38629 1.38629
1996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1997 40 0.23862 2.84929 2.43386 2.70756 40 - -
1998 1.38629 1.38629 1.38629 1.38629
1999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2000 41 2.81865 0.23582 2.88868 2.35662 41 - -
2001 1.38629 1.38629 1.38629 1.38629
2002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2003 42 2.53331 3.02441 0.20344 2.88069 42 - -
2004 1.38629 1.38629 1.38629 1.38629
2005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2006 43 0.23862 2.84929 2.43386 2.70756 43 - -
2007 1.38629 1.38629 1.38629 1.38629
2008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2009 44 0.23862 2.84929 2.43386 2.70756 44 - -
2010 1.38629 1.38629 1.38629 1.38629
2011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2012 45 2.81865 0.23582 2.88868 2.35662 45 - -
2013 1.38629 1.38629 1.38629 1.38629
2014 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2015 //
2016 HMMER3/b [3.0 | March 2010]
2017 NAME 2_5.8_Rhodophyta_58S_start_twoh_long
2018 LENG 45
2019 ALPH DNA
2020 RF no
2021 CS no
2022 MAP yes
2023 DATE Wed Jan 25 21:44:05 2012
2024 NSEQ 2
2025 EFFN 2.000000
2026 CKSUM 629811214
2027 STATS LOCAL MSV -7.3522 0.72804
2028 STATS LOCAL VITERBI -8.2940 0.72804
2029 STATS LOCAL FORWARD -3.7313 0.72804
2030 HMM A C G T
2031 m->m m->i m->d i->m i->i d->m d->d
2032 COMPO 1.34240 1.34077 1.43638 1.42982
2033 1.38629 1.38629 1.38629 1.38629
2034 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2035 1 2.81865 0.23582 2.88868 2.35662 1 - -
2036 1.38629 1.38629 1.38629 1.38629
2037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2038 2 0.23862 2.84929 2.43386 2.70756 2 - -
2039 1.38629 1.38629 1.38629 1.38629
2040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2041 3 0.23862 2.84929 2.43386 2.70756 3 - -
2042 1.38629 1.38629 1.38629 1.38629
2043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2044 4 2.81865 0.23582 2.88868 2.35662 4 - -
2045 1.38629 1.38629 1.38629 1.38629
2046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2047 5 2.57915 2.25909 2.64442 0.28946 5 - -
2048 1.38629 1.38629 1.38629 1.38629
2049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2050 6 2.81865 0.23582 2.88868 2.35662 6 - -
2051 1.38629 1.38629 1.38629 1.38629
2052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2053 7 2.53331 3.02441 0.20344 2.88069 7 - -
2054 1.38629 1.38629 1.38629 1.38629
2055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2056 8 2.57915 2.25909 2.64442 0.28946 8 - -
2057 1.38629 1.38629 1.38629 1.38629
2058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2059 9 0.23862 2.84929 2.43386 2.70756 9 - -
2060 1.38629 1.38629 1.38629 1.38629
2061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2062 10 0.23862 2.84929 2.43386 2.70756 10 - -
2063 1.38629 1.38629 1.38629 1.38629
2064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2065 11 2.81865 0.23582 2.88868 2.35662 11 - -
2066 1.38629 1.38629 1.38629 1.38629
2067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2068 12 2.53331 3.02441 0.20344 2.88069 12 - -
2069 1.38629 1.38629 1.38629 1.38629
2070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2071 13 2.81865 0.23582 2.88868 2.35662 13 - -
2072 1.38629 1.38629 1.38629 1.38629
2073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2074 14 2.57915 2.25909 2.64442 0.28946 14 - -
2075 1.38629 1.38629 1.38629 1.38629
2076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2077 15 2.53331 3.02441 0.20344 2.88069 15 - -
2078 1.38629 1.38629 1.38629 1.38629
2079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2080 16 2.53331 3.02441 0.20344 2.88069 16 - -
2081 1.38629 1.38629 1.38629 1.38629
2082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2083 17 0.23862 2.84929 2.43386 2.70756 17 - -
2084 1.38629 1.38629 1.38629 1.38629
2085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2086 18 2.57915 2.25909 2.64442 0.28946 18 - -
2087 1.38629 1.38629 1.38629 1.38629
2088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2089 19 2.53331 3.02441 0.20344 2.88069 19 - -
2090 1.38629 1.38629 1.38629 1.38629
2091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2092 20 2.57915 2.25909 2.64442 0.28946 20 - -
2093 1.38629 1.38629 1.38629 1.38629
2094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2095 21 2.81865 0.23582 2.88868 2.35662 21 - -
2096 1.38629 1.38629 1.38629 1.38629
2097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2098 22 2.57915 2.25909 2.64442 0.28946 22 - -
2099 1.38629 1.38629 1.38629 1.38629
2100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2101 23 2.81865 0.23582 2.88868 2.35662 23 - -
2102 1.38629 1.38629 1.38629 1.38629
2103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2104 24 2.53331 3.02441 0.20344 2.88069 24 - -
2105 1.38629 1.38629 1.38629 1.38629
2106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2107 25 2.53331 3.02441 0.20344 2.88069 25 - -
2108 1.38629 1.38629 1.38629 1.38629
2109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2110 26 2.57915 2.25909 2.64442 0.28946 26 - -
2111 1.38629 1.38629 1.38629 1.38629
2112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2113 27 2.57915 2.25909 2.64442 0.28946 27 - -
2114 1.38629 1.38629 1.38629 1.38629
2115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2116 28 2.81865 0.23582 2.88868 2.35662 28 - -
2117 1.38629 1.38629 1.38629 1.38629
2118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2119 29 2.81865 0.23582 2.88868 2.35662 29 - -
2120 1.38629 1.38629 1.38629 1.38629
2121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2122 30 2.57915 2.25909 2.64442 0.28946 30 - -
2123 1.38629 1.38629 1.38629 1.38629
2124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2125 31 0.23862 2.84929 2.43386 2.70756 31 - -
2126 1.38629 1.38629 1.38629 1.38629
2127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2128 32 2.81865 0.23582 2.88868 2.35662 32 - -
2129 1.38629 1.38629 1.38629 1.38629
2130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2131 33 0.23862 2.84929 2.43386 2.70756 33 - -
2132 1.38629 1.38629 1.38629 1.38629
2133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2134 34 2.57915 2.25909 2.64442 0.28946 34 - -
2135 1.38629 1.38629 1.38629 1.38629
2136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2137 35 2.81865 0.23582 2.88868 2.35662 35 - -
2138 1.38629 1.38629 1.38629 1.38629
2139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2140 36 2.53331 3.02441 0.20344 2.88069 36 - -
2141 1.38629 1.38629 1.38629 1.38629
2142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2143 37 0.23862 2.84929 2.43386 2.70756 37 - -
2144 1.38629 1.38629 1.38629 1.38629
2145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2146 38 2.57915 2.25909 2.64442 0.28946 38 - -
2147 1.38629 1.38629 1.38629 1.38629
2148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2149 39 2.53331 3.02441 0.20344 2.88069 39 - -
2150 1.38629 1.38629 1.38629 1.38629
2151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2152 40 0.23862 2.84929 2.43386 2.70756 40 - -
2153 1.38629 1.38629 1.38629 1.38629
2154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2155 41 0.23862 2.84929 2.43386 2.70756 41 - -
2156 1.38629 1.38629 1.38629 1.38629
2157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2158 42 2.53331 3.02441 0.20344 2.88069 42 - -
2159 1.38629 1.38629 1.38629 1.38629
2160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2161 43 0.23862 2.84929 2.43386 2.70756 43 - -
2162 1.38629 1.38629 1.38629 1.38629
2163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2164 44 0.23862 2.84929 2.43386 2.70756 44 - -
2165 1.38629 1.38629 1.38629 1.38629
2166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2167 45 2.81865 0.23582 2.88868 2.35662 45 - -
2168 1.38629 1.38629 1.38629 1.38629
2169 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2170 //
2171 HMMER3/b [3.0 | March 2010]
2172 NAME 4_LSU_Rhodophyta_4_LSU_start_five_long
2173 LENG 45
2174 ALPH DNA
2175 RF no
2176 CS no
2177 MAP yes
2178 DATE Wed Jan 25 22:10:04 2012
2179 NSEQ 2
2180 EFFN 2.000000
2181 CKSUM 4069474395
2182 STATS LOCAL MSV -7.4758 0.72803
2183 STATS LOCAL VITERBI -8.1006 0.72803
2184 STATS LOCAL FORWARD -3.3098 0.72803
2185 HMM A C G T
2186 m->m m->i m->d i->m i->i d->m d->d
2187 COMPO 1.19186 1.40481 1.49426 1.48495
2188 1.38629 1.38629 1.38629 1.38629
2189 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2190 1 2.57915 2.25909 2.64442 0.28946 1 - -
2191 1.38629 1.38629 1.38629 1.38629
2192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2193 2 2.57915 2.25909 2.64442 0.28946 2 - -
2194 1.38629 1.38629 1.38629 1.38629
2195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2196 3 2.57915 2.25909 2.64442 0.28946 3 - -
2197 1.38629 1.38629 1.38629 1.38629
2198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2199 4 2.53331 3.02441 0.20344 2.88069 4 - -
2200 1.38629 1.38629 1.38629 1.38629
2201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2202 5 2.53331 3.02441 0.20344 2.88069 5 - -
2203 1.38629 1.38629 1.38629 1.38629
2204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2205 6 0.23862 2.84929 2.43386 2.70756 6 - -
2206 1.38629 1.38629 1.38629 1.38629
2207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2208 7 2.57915 2.25909 2.64442 0.28946 7 - -
2209 1.38629 1.38629 1.38629 1.38629
2210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2211 8 2.81865 0.23582 2.88868 2.35662 8 - -
2212 1.38629 1.38629 1.38629 1.38629
2213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2214 9 2.57915 2.25909 2.64442 0.28946 9 - -
2215 1.38629 1.38629 1.38629 1.38629
2216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2217 10 2.81865 0.23582 2.88868 2.35662 10 - -
2218 1.38629 1.38629 1.38629 1.38629
2219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2220 11 0.23862 2.84929 2.43386 2.70756 11 - -
2221 1.38629 1.38629 1.38629 1.38629
2222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2223 12 0.23862 2.84929 2.43386 2.70756 12 - -
2224 1.38629 1.38629 1.38629 1.38629
2225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2226 13 0.23862 2.84929 2.43386 2.70756 13 - -
2227 1.38629 1.38629 1.38629 1.38629
2228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2229 14 2.57915 2.25909 2.64442 0.28946 14 - -
2230 1.38629 1.38629 1.38629 1.38629
2231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2232 15 2.81865 0.23582 2.88868 2.35662 15 - -
2233 1.38629 1.38629 1.38629 1.38629
2234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2235 16 0.23862 2.84929 2.43386 2.70756 16 - -
2236 1.38629 1.38629 1.38629 1.38629
2237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2238 17 2.53331 3.02441 0.20344 2.88069 17 - -
2239 1.38629 1.38629 1.38629 1.38629
2240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2241 18 2.53331 3.02441 0.20344 2.88069 18 - -
2242 1.38629 1.38629 1.38629 1.38629
2243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2244 19 2.81865 0.23582 2.88868 2.35662 19 - -
2245 1.38629 1.38629 1.38629 1.38629
2246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2247 20 0.23862 2.84929 2.43386 2.70756 20 - -
2248 1.38629 1.38629 1.38629 1.38629
2249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2250 21 0.23862 2.84929 2.43386 2.70756 21 - -
2251 1.38629 1.38629 1.38629 1.38629
2252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2253 22 2.53331 3.02441 0.20344 2.88069 22 - -
2254 1.38629 1.38629 1.38629 1.38629
2255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2256 23 2.53331 3.02441 0.20344 2.88069 23 - -
2257 1.38629 1.38629 1.38629 1.38629
2258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2259 24 2.81865 0.23582 2.88868 2.35662 24 - -
2260 1.38629 1.38629 1.38629 1.38629
2261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2262 25 0.23862 2.84929 2.43386 2.70756 25 - -
2263 1.38629 1.38629 1.38629 1.38629
2264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2265 26 0.23862 2.84929 2.43386 2.70756 26 - -
2266 1.38629 1.38629 1.38629 1.38629
2267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2268 27 2.81865 0.23582 2.88868 2.35662 27 - -
2269 1.38629 1.38629 1.38629 1.38629
2270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2271 28 2.81865 0.23582 2.88868 2.35662 28 - -
2272 1.38629 1.38629 1.38629 1.38629
2273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2274 29 2.81865 0.23582 2.88868 2.35662 29 - -
2275 1.38629 1.38629 1.38629 1.38629
2276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2277 30 2.53331 3.02441 0.20344 2.88069 30 - -
2278 1.38629 1.38629 1.38629 1.38629
2279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2280 31 2.81865 0.23582 2.88868 2.35662 31 - -
2281 1.38629 1.38629 1.38629 1.38629
2282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2283 32 2.57915 2.25909 2.64442 0.28946 32 - -
2284 1.38629 1.38629 1.38629 1.38629
2285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2286 33 2.53331 3.02441 0.20344 2.88069 33 - -
2287 1.38629 1.38629 1.38629 1.38629
2288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2289 34 0.23862 2.84929 2.43386 2.70756 34 - -
2290 1.38629 1.38629 1.38629 1.38629
2291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2292 35 0.23862 2.84929 2.43386 2.70756 35 - -
2293 1.38629 1.38629 1.38629 1.38629
2294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2295 36 2.81865 0.23582 2.88868 2.35662 36 - -
2296 1.38629 1.38629 1.38629 1.38629
2297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2298 37 2.57915 2.25909 2.64442 0.28946 37 - -
2299 1.38629 1.38629 1.38629 1.38629
2300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2301 38 2.57915 2.25909 2.64442 0.28946 38 - -
2302 1.38629 1.38629 1.38629 1.38629
2303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2304 39 0.23862 2.84929 2.43386 2.70756 39 - -
2305 1.38629 1.38629 1.38629 1.38629
2306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2307 40 0.23862 2.84929 2.43386 2.70756 40 - -
2308 1.38629 1.38629 1.38629 1.38629
2309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2310 41 2.53331 3.02441 0.20344 2.88069 41 - -
2311 1.38629 1.38629 1.38629 1.38629
2312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2313 42 2.81865 0.23582 2.88868 2.35662 42 - -
2314 1.38629 1.38629 1.38629 1.38629
2315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2316 43 0.23862 2.84929 2.43386 2.70756 43 - -
2317 1.38629 1.38629 1.38629 1.38629
2318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2319 44 2.57915 2.25909 2.64442 0.28946 44 - -
2320 1.38629 1.38629 1.38629 1.38629
2321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2322 45 0.23862 2.84929 2.43386 2.70756 45 - -
2323 1.38629 1.38629 1.38629 1.38629
2324 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2325 //
2326 HMMER3/b [3.0 | March 2010]
2327 NAME 4_LSU_Rhodophyta_4_LSU_start_four_long
2328 LENG 45
2329 ALPH DNA
2330 RF no
2331 CS no
2332 MAP yes
2333 DATE Wed Jan 25 22:09:48 2012
2334 NSEQ 40
2335 EFFN 3.276367
2336 CKSUM 565607296
2337 STATS LOCAL MSV -8.0920 0.71934
2338 STATS LOCAL VITERBI -7.6656 0.71934
2339 STATS LOCAL FORWARD -3.9440 0.71934
2340 HMM A C G T
2341 m->m m->i m->d i->m i->i d->m d->d
2342 COMPO 1.11205 1.39822 1.60365 1.50094
2343 1.38629 1.38629 1.38629 1.38629
2344 0.03720 4.00303 4.00303 1.46634 0.26236 0.00000 *
2345 1 3.07355 2.58556 3.12228 0.18112 1 - -
2346 1.38629 1.38629 1.38629 1.38629
2347 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2348 2 3.07355 2.58556 3.12228 0.18112 2 - -
2349 1.38629 1.38629 1.38629 1.38629
2350 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2351 3 3.07355 2.58556 3.12228 0.18112 3 - -
2352 1.38629 1.38629 1.38629 1.38629
2353 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2354 4 2.93708 3.57257 0.11883 3.47567 4 - -
2355 1.38629 1.38629 1.38629 1.38629
2356 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2357 5 2.93708 3.57257 0.11883 3.47567 5 - -
2358 1.38629 1.38629 1.38629 1.38629
2359 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2360 6 0.14388 3.36532 2.79221 3.26557 6 - -
2361 1.38629 1.38629 1.38629 1.38629
2362 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2363 7 3.07355 2.58556 3.12228 0.18112 7 - -
2364 1.38629 1.38629 1.38629 1.38629
2365 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2366 8 3.41588 0.13228 3.46607 2.81644 8 - -
2367 1.38629 1.38629 1.38629 1.38629
2368 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2369 9 3.07355 2.58556 3.12228 0.18112 9 - -
2370 1.38629 1.38629 1.38629 1.38629
2371 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2372 10 3.41588 0.13228 3.46607 2.81644 10 - -
2373 1.38629 1.38629 1.38629 1.38629
2374 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2375 11 0.14388 3.36532 2.79221 3.26557 11 - -
2376 1.38629 1.38629 1.38629 1.38629
2377 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2378 12 0.14388 3.36532 2.79221 3.26557 12 - -
2379 1.38629 1.38629 1.38629 1.38629
2380 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2381 13 0.14388 3.36532 2.79221 3.26557 13 - -
2382 1.38629 1.38629 1.38629 1.38629
2383 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2384 14 3.07355 2.58556 3.12228 0.18112 14 - -
2385 1.38629 1.38629 1.38629 1.38629
2386 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2387 15 3.41588 0.13228 3.46607 2.81644 15 - -
2388 1.38629 1.38629 1.38629 1.38629
2389 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2390 16 0.14388 3.36532 2.79221 3.26557 16 - -
2391 1.38629 1.38629 1.38629 1.38629
2392 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2393 17 2.93708 3.57257 0.11883 3.47567 17 - -
2394 1.38629 1.38629 1.38629 1.38629
2395 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2396 18 0.14388 3.36532 2.79221 3.26557 18 - -
2397 1.38629 1.38629 1.38629 1.38629
2398 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2399 19 3.19001 0.18613 3.24682 2.41058 19 - -
2400 1.38629 1.38629 1.38629 1.38629
2401 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2402 20 0.14388 3.36532 2.79221 3.26557 20 - -
2403 1.38629 1.38629 1.38629 1.38629
2404 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2405 21 0.14388 3.36532 2.79221 3.26557 21 - -
2406 1.38629 1.38629 1.38629 1.38629
2407 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2408 22 2.93708 3.57257 0.11883 3.47567 22 - -
2409 1.38629 1.38629 1.38629 1.38629
2410 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2411 23 0.14388 3.36532 2.79221 3.26557 23 - -
2412 1.38629 1.38629 1.38629 1.38629
2413 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2414 24 3.41588 0.13228 3.46607 2.81644 24 - -
2415 1.38629 1.38629 1.38629 1.38629
2416 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2417 25 2.93708 3.57257 0.11883 3.47567 25 - -
2418 1.38629 1.38629 1.38629 1.38629
2419 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2420 26 0.14388 3.36532 2.79221 3.26557 26 - -
2421 1.38629 1.38629 1.38629 1.38629
2422 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2423 27 3.41588 0.13228 3.46607 2.81644 27 - -
2424 1.38629 1.38629 1.38629 1.38629
2425 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2426 28 3.41588 0.13228 3.46607 2.81644 28 - -
2427 1.38629 1.38629 1.38629 1.38629
2428 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2429 29 3.41588 0.13228 3.46607 2.81644 29 - -
2430 1.38629 1.38629 1.38629 1.38629
2431 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2432 30 2.93708 3.57257 0.11883 3.47567 30 - -
2433 1.38629 1.38629 1.38629 1.38629
2434 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2435 31 3.41588 0.13228 3.46607 2.81644 31 - -
2436 1.38629 1.38629 1.38629 1.38629
2437 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2438 32 3.07355 2.58556 3.12228 0.18112 32 - -
2439 1.38629 1.38629 1.38629 1.38629
2440 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2441 33 2.93708 3.57257 0.11883 3.47567 33 - -
2442 1.38629 1.38629 1.38629 1.38629
2443 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2444 34 0.14388 3.36532 2.79221 3.26557 34 - -
2445 1.38629 1.38629 1.38629 1.38629
2446 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2447 35 0.14388 3.36532 2.79221 3.26557 35 - -
2448 1.38629 1.38629 1.38629 1.38629
2449 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2450 36 3.41588 0.13228 3.46607 2.81644 36 - -
2451 1.38629 1.38629 1.38629 1.38629
2452 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2453 37 3.07355 2.58556 3.12228 0.18112 37 - -
2454 1.38629 1.38629 1.38629 1.38629
2455 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2456 38 3.07355 2.58556 3.12228 0.18112 38 - -
2457 1.38629 1.38629 1.38629 1.38629
2458 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2459 39 0.14388 3.36532 2.79221 3.26557 39 - -
2460 1.38629 1.38629 1.38629 1.38629
2461 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2462 40 0.14388 3.36532 2.79221 3.26557 40 - -
2463 1.38629 1.38629 1.38629 1.38629
2464 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2465 41 2.93708 3.57257 0.11883 3.47567 41 - -
2466 1.38629 1.38629 1.38629 1.38629
2467 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2468 42 3.41588 0.13228 3.46607 2.81644 42 - -
2469 1.38629 1.38629 1.38629 1.38629
2470 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2471 43 0.14388 3.36532 2.79221 3.26557 43 - -
2472 1.38629 1.38629 1.38629 1.38629
2473 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2474 44 3.07355 2.58556 3.12228 0.18112 44 - -
2475 1.38629 1.38629 1.38629 1.38629
2476 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547
2477 45 0.14388 3.36532 2.79221 3.26557 45 - -
2478 1.38629 1.38629 1.38629 1.38629
2479 0.01878 3.98460 * 1.46634 0.26236 0.00000 *
2480 //
2481 HMMER3/b [3.0 | March 2010]
2482 NAME 4_LSU_Rhodophyta_4_LSU_start_one_long
2483 LENG 45
2484 ALPH DNA
2485 RF no
2486 CS no
2487 MAP yes
2488 DATE Wed Jan 25 22:09:23 2012
2489 NSEQ 10
2490 EFFN 3.305664
2491 CKSUM 3245122891
2492 STATS LOCAL MSV -8.3526 0.71932
2493 STATS LOCAL VITERBI -7.6782 0.71932
2494 STATS LOCAL FORWARD -3.9655 0.71932
2495 HMM A C G T
2496 m->m m->i m->d i->m i->i d->m d->d
2497 COMPO 1.11041 1.53680 1.60255 1.36992
2498 1.38629 1.38629 1.38629 1.38629
2499 0.03700 4.00836 4.00836 1.46634 0.26236 0.00000 *
2500 1 3.08310 2.59163 3.13146 0.17957 1 - -
2501 1.38629 1.38629 1.38629 1.38629
2502 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2503 2 3.08310 2.59163 3.13146 0.17957 2 - -
2504 1.38629 1.38629 1.38629 1.38629
2505 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2506 3 3.08310 2.59163 3.13146 0.17957 3 - -
2507 1.38629 1.38629 1.38629 1.38629
2508 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2509 4 2.94371 3.58221 0.11777 3.48630 4 - -
2510 1.38629 1.38629 1.38629 1.38629
2511 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2512 5 2.94371 3.58221 0.11777 3.48630 5 - -
2513 1.38629 1.38629 1.38629 1.38629
2514 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2515 6 0.14262 3.37480 2.79837 3.27595 6 - -
2516 1.38629 1.38629 1.38629 1.38629
2517 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2518 7 3.08310 2.59163 3.13146 0.17957 7 - -
2519 1.38629 1.38629 1.38629 1.38629
2520 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2521 8 3.42681 0.13096 3.47654 2.82441 8 - -
2522 1.38629 1.38629 1.38629 1.38629
2523 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2524 9 3.08310 2.59163 3.13146 0.17957 9 - -
2525 1.38629 1.38629 1.38629 1.38629
2526 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2527 10 3.42681 0.13096 3.47654 2.82441 10 - -
2528 1.38629 1.38629 1.38629 1.38629
2529 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2530 11 0.14262 3.37480 2.79837 3.27595 11 - -
2531 1.38629 1.38629 1.38629 1.38629
2532 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2533 12 0.14262 3.37480 2.79837 3.27595 12 - -
2534 1.38629 1.38629 1.38629 1.38629
2535 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2536 13 0.14262 3.37480 2.79837 3.27595 13 - -
2537 1.38629 1.38629 1.38629 1.38629
2538 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2539 14 3.08310 2.59163 3.13146 0.17957 14 - -
2540 1.38629 1.38629 1.38629 1.38629
2541 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2542 15 3.42681 0.13096 3.47654 2.82441 15 - -
2543 1.38629 1.38629 1.38629 1.38629
2544 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2545 16 0.14262 3.37480 2.79837 3.27595 16 - -
2546 1.38629 1.38629 1.38629 1.38629
2547 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2548 17 2.94371 3.58221 0.11777 3.48630 17 - -
2549 1.38629 1.38629 1.38629 1.38629
2550 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2551 18 0.14262 3.37480 2.79837 3.27595 18 - -
2552 1.38629 1.38629 1.38629 1.38629
2553 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2554 19 3.42681 0.13096 3.47654 2.82441 19 - -
2555 1.38629 1.38629 1.38629 1.38629
2556 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2557 20 0.14262 3.37480 2.79837 3.27595 20 - -
2558 1.38629 1.38629 1.38629 1.38629
2559 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2560 21 0.14262 3.37480 2.79837 3.27595 21 - -
2561 1.38629 1.38629 1.38629 1.38629
2562 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2563 22 2.94371 3.58221 0.11777 3.48630 22 - -
2564 1.38629 1.38629 1.38629 1.38629
2565 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2566 23 0.14262 3.37480 2.79837 3.27595 23 - -
2567 1.38629 1.38629 1.38629 1.38629
2568 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2569 24 3.08310 2.59163 3.13146 0.17957 24 - -
2570 1.38629 1.38629 1.38629 1.38629
2571 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2572 25 2.94371 3.58221 0.11777 3.48630 25 - -
2573 1.38629 1.38629 1.38629 1.38629
2574 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2575 26 0.14262 3.37480 2.79837 3.27595 26 - -
2576 1.38629 1.38629 1.38629 1.38629
2577 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2578 27 3.42681 0.13096 3.47654 2.82441 27 - -
2579 1.38629 1.38629 1.38629 1.38629
2580 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2581 28 3.42681 0.13096 3.47654 2.82441 28 - -
2582 1.38629 1.38629 1.38629 1.38629
2583 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2584 29 3.42681 0.13096 3.47654 2.82441 29 - -
2585 1.38629 1.38629 1.38629 1.38629
2586 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2587 30 2.94371 3.58221 0.11777 3.48630 30 - -
2588 1.38629 1.38629 1.38629 1.38629
2589 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2590 31 3.42681 0.13096 3.47654 2.82441 31 - -
2591 1.38629 1.38629 1.38629 1.38629
2592 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2593 32 3.08310 2.59163 3.13146 0.17957 32 - -
2594 1.38629 1.38629 1.38629 1.38629
2595 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2596 33 2.94371 3.58221 0.11777 3.48630 33 - -
2597 1.38629 1.38629 1.38629 1.38629
2598 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2599 34 0.14262 3.37480 2.79837 3.27595 34 - -
2600 1.38629 1.38629 1.38629 1.38629
2601 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2602 35 0.14262 3.37480 2.79837 3.27595 35 - -
2603 1.38629 1.38629 1.38629 1.38629
2604 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2605 36 3.08310 2.59163 3.13146 0.17957 36 - -
2606 1.38629 1.38629 1.38629 1.38629
2607 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2608 37 3.08310 2.59163 3.13146 0.17957 37 - -
2609 1.38629 1.38629 1.38629 1.38629
2610 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2611 38 3.08310 2.59163 3.13146 0.17957 38 - -
2612 1.38629 1.38629 1.38629 1.38629
2613 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2614 39 0.14262 3.37480 2.79837 3.27595 39 - -
2615 1.38629 1.38629 1.38629 1.38629
2616 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2617 40 0.14262 3.37480 2.79837 3.27595 40 - -
2618 1.38629 1.38629 1.38629 1.38629
2619 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2620 41 2.94371 3.58221 0.11777 3.48630 41 - -
2621 1.38629 1.38629 1.38629 1.38629
2622 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2623 42 3.42681 0.13096 3.47654 2.82441 42 - -
2624 1.38629 1.38629 1.38629 1.38629
2625 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2626 43 0.14262 3.37480 2.79837 3.27595 43 - -
2627 1.38629 1.38629 1.38629 1.38629
2628 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2629 44 3.08310 2.59163 3.13146 0.17957 44 - -
2630 1.38629 1.38629 1.38629 1.38629
2631 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2632 45 0.14262 3.37480 2.79837 3.27595 45 - -
2633 1.38629 1.38629 1.38629 1.38629
2634 0.01867 3.99003 * 1.46634 0.26236 0.00000 *
2635 //
2636 HMMER3/b [3.0 | March 2010]
2637 NAME 4_LSU_Rhodophyta_4_LSU_start_six_long
2638 LENG 45
2639 ALPH DNA
2640 RF no
2641 CS no
2642 MAP yes
2643 DATE Wed Jan 25 22:10:12 2012
2644 NSEQ 10
2645 EFFN 3.305664
2646 CKSUM 3245122891
2647 STATS LOCAL MSV -8.3526 0.71932
2648 STATS LOCAL VITERBI -7.6782 0.71932
2649 STATS LOCAL FORWARD -3.9655 0.71932
2650 HMM A C G T
2651 m->m m->i m->d i->m i->i d->m d->d
2652 COMPO 1.11041 1.53680 1.60255 1.36992
2653 1.38629 1.38629 1.38629 1.38629
2654 0.03700 4.00836 4.00836 1.46634 0.26236 0.00000 *
2655 1 3.08310 2.59163 3.13146 0.17957 1 - -
2656 1.38629 1.38629 1.38629 1.38629
2657 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2658 2 3.08310 2.59163 3.13146 0.17957 2 - -
2659 1.38629 1.38629 1.38629 1.38629
2660 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2661 3 3.08310 2.59163 3.13146 0.17957 3 - -
2662 1.38629 1.38629 1.38629 1.38629
2663 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2664 4 2.94371 3.58221 0.11777 3.48630 4 - -
2665 1.38629 1.38629 1.38629 1.38629
2666 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2667 5 2.94371 3.58221 0.11777 3.48630 5 - -
2668 1.38629 1.38629 1.38629 1.38629
2669 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2670 6 0.14262 3.37480 2.79837 3.27595 6 - -
2671 1.38629 1.38629 1.38629 1.38629
2672 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2673 7 3.08310 2.59163 3.13146 0.17957 7 - -
2674 1.38629 1.38629 1.38629 1.38629
2675 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2676 8 3.42681 0.13096 3.47654 2.82441 8 - -
2677 1.38629 1.38629 1.38629 1.38629
2678 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2679 9 3.08310 2.59163 3.13146 0.17957 9 - -
2680 1.38629 1.38629 1.38629 1.38629
2681 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2682 10 3.42681 0.13096 3.47654 2.82441 10 - -
2683 1.38629 1.38629 1.38629 1.38629
2684 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2685 11 0.14262 3.37480 2.79837 3.27595 11 - -
2686 1.38629 1.38629 1.38629 1.38629
2687 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2688 12 0.14262 3.37480 2.79837 3.27595 12 - -
2689 1.38629 1.38629 1.38629 1.38629
2690 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2691 13 0.14262 3.37480 2.79837 3.27595 13 - -
2692 1.38629 1.38629 1.38629 1.38629
2693 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2694 14 3.08310 2.59163 3.13146 0.17957 14 - -
2695 1.38629 1.38629 1.38629 1.38629
2696 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2697 15 3.42681 0.13096 3.47654 2.82441 15 - -
2698 1.38629 1.38629 1.38629 1.38629
2699 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2700 16 0.14262 3.37480 2.79837 3.27595 16 - -
2701 1.38629 1.38629 1.38629 1.38629
2702 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2703 17 2.94371 3.58221 0.11777 3.48630 17 - -
2704 1.38629 1.38629 1.38629 1.38629
2705 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2706 18 0.14262 3.37480 2.79837 3.27595 18 - -
2707 1.38629 1.38629 1.38629 1.38629
2708 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2709 19 3.42681 0.13096 3.47654 2.82441 19 - -
2710 1.38629 1.38629 1.38629 1.38629
2711 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2712 20 0.14262 3.37480 2.79837 3.27595 20 - -
2713 1.38629 1.38629 1.38629 1.38629
2714 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2715 21 0.14262 3.37480 2.79837 3.27595 21 - -
2716 1.38629 1.38629 1.38629 1.38629
2717 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2718 22 2.94371 3.58221 0.11777 3.48630 22 - -
2719 1.38629 1.38629 1.38629 1.38629
2720 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2721 23 0.14262 3.37480 2.79837 3.27595 23 - -
2722 1.38629 1.38629 1.38629 1.38629
2723 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2724 24 3.08310 2.59163 3.13146 0.17957 24 - -
2725 1.38629 1.38629 1.38629 1.38629
2726 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2727 25 2.94371 3.58221 0.11777 3.48630 25 - -
2728 1.38629 1.38629 1.38629 1.38629
2729 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2730 26 0.14262 3.37480 2.79837 3.27595 26 - -
2731 1.38629 1.38629 1.38629 1.38629
2732 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2733 27 3.42681 0.13096 3.47654 2.82441 27 - -
2734 1.38629 1.38629 1.38629 1.38629
2735 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2736 28 3.42681 0.13096 3.47654 2.82441 28 - -
2737 1.38629 1.38629 1.38629 1.38629
2738 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2739 29 3.42681 0.13096 3.47654 2.82441 29 - -
2740 1.38629 1.38629 1.38629 1.38629
2741 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2742 30 2.94371 3.58221 0.11777 3.48630 30 - -
2743 1.38629 1.38629 1.38629 1.38629
2744 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2745 31 3.42681 0.13096 3.47654 2.82441 31 - -
2746 1.38629 1.38629 1.38629 1.38629
2747 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2748 32 3.08310 2.59163 3.13146 0.17957 32 - -
2749 1.38629 1.38629 1.38629 1.38629
2750 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2751 33 2.94371 3.58221 0.11777 3.48630 33 - -
2752 1.38629 1.38629 1.38629 1.38629
2753 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2754 34 0.14262 3.37480 2.79837 3.27595 34 - -
2755 1.38629 1.38629 1.38629 1.38629
2756 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2757 35 0.14262 3.37480 2.79837 3.27595 35 - -
2758 1.38629 1.38629 1.38629 1.38629
2759 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2760 36 3.08310 2.59163 3.13146 0.17957 36 - -
2761 1.38629 1.38629 1.38629 1.38629
2762 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2763 37 3.08310 2.59163 3.13146 0.17957 37 - -
2764 1.38629 1.38629 1.38629 1.38629
2765 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2766 38 3.08310 2.59163 3.13146 0.17957 38 - -
2767 1.38629 1.38629 1.38629 1.38629
2768 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2769 39 0.14262 3.37480 2.79837 3.27595 39 - -
2770 1.38629 1.38629 1.38629 1.38629
2771 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2772 40 0.14262 3.37480 2.79837 3.27595 40 - -
2773 1.38629 1.38629 1.38629 1.38629
2774 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2775 41 2.94371 3.58221 0.11777 3.48630 41 - -
2776 1.38629 1.38629 1.38629 1.38629
2777 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2778 42 3.42681 0.13096 3.47654 2.82441 42 - -
2779 1.38629 1.38629 1.38629 1.38629
2780 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2781 43 0.14262 3.37480 2.79837 3.27595 43 - -
2782 1.38629 1.38629 1.38629 1.38629
2783 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2784 44 3.08310 2.59163 3.13146 0.17957 44 - -
2785 1.38629 1.38629 1.38629 1.38629
2786 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547
2787 45 0.14262 3.37480 2.79837 3.27595 45 - -
2788 1.38629 1.38629 1.38629 1.38629
2789 0.01867 3.99003 * 1.46634 0.26236 0.00000 *
2790 //
2791 HMMER3/b [3.0 | March 2010]
2792 NAME 4_LSU_Rhodophyta_4_LSU_start_three_long
2793 LENG 45
2794 ALPH DNA
2795 RF no
2796 CS no
2797 MAP yes
2798 DATE Wed Jan 25 22:09:39 2012
2799 NSEQ 3
2800 EFFN 3.000000
2801 CKSUM 2901651986
2802 STATS LOCAL MSV -8.1984 0.72045
2803 STATS LOCAL VITERBI -7.6948 0.72045
2804 STATS LOCAL FORWARD -3.8288 0.72045
2805 HMM A C G T
2806 m->m m->i m->d i->m i->i d->m d->d
2807 COMPO 1.11685 1.46208 1.59584 1.43465
2808 1.38629 1.38629 1.38629 1.38629
2809 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
2810 1 2.97980 2.52563 3.03204 0.19727 1 - -
2811 1.38629 1.38629 1.38629 1.38629
2812 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2813 2 2.97980 2.52563 3.03204 0.19727 2 - -
2814 1.38629 1.38629 1.38629 1.38629
2815 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2816 3 2.97980 2.52563 3.03204 0.19727 3 - -
2817 1.38629 1.38629 1.38629 1.38629
2818 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2819 4 2.86982 3.47591 0.13017 3.36931 4 - -
2820 1.38629 1.38629 1.38629 1.38629
2821 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2822 5 2.86982 3.47591 0.13017 3.36931 5 - -
2823 1.38629 1.38629 1.38629 1.38629
2824 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2825 6 0.15719 3.27118 2.73043 3.16274 6 - -
2826 1.38629 1.38629 1.38629 1.38629
2827 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2828 7 2.97980 2.52563 3.03204 0.19727 7 - -
2829 1.38629 1.38629 1.38629 1.38629
2830 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2831 8 3.30705 0.14631 3.36166 2.73626 8 - -
2832 1.38629 1.38629 1.38629 1.38629
2833 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2834 9 2.97980 2.52563 3.03204 0.19727 9 - -
2835 1.38629 1.38629 1.38629 1.38629
2836 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2837 10 3.30705 0.14631 3.36166 2.73626 10 - -
2838 1.38629 1.38629 1.38629 1.38629
2839 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2840 11 0.15719 3.27118 2.73043 3.16274 11 - -
2841 1.38629 1.38629 1.38629 1.38629
2842 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2843 12 0.15719 3.27118 2.73043 3.16274 12 - -
2844 1.38629 1.38629 1.38629 1.38629
2845 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2846 13 0.15719 3.27118 2.73043 3.16274 13 - -
2847 1.38629 1.38629 1.38629 1.38629
2848 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2849 14 2.97980 2.52563 3.03204 0.19727 14 - -
2850 1.38629 1.38629 1.38629 1.38629
2851 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2852 15 3.30705 0.14631 3.36166 2.73626 15 - -
2853 1.38629 1.38629 1.38629 1.38629
2854 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2855 16 0.15719 3.27118 2.73043 3.16274 16 - -
2856 1.38629 1.38629 1.38629 1.38629
2857 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2858 17 2.86982 3.47591 0.13017 3.36931 17 - -
2859 1.38629 1.38629 1.38629 1.38629
2860 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2861 18 0.15719 3.27118 2.73043 3.16274 18 - -
2862 1.38629 1.38629 1.38629 1.38629
2863 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2864 19 3.30705 0.14631 3.36166 2.73626 19 - -
2865 1.38629 1.38629 1.38629 1.38629
2866 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2867 20 0.15719 3.27118 2.73043 3.16274 20 - -
2868 1.38629 1.38629 1.38629 1.38629
2869 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2870 21 0.15719 3.27118 2.73043 3.16274 21 - -
2871 1.38629 1.38629 1.38629 1.38629
2872 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2873 22 2.86982 3.47591 0.13017 3.36931 22 - -
2874 1.38629 1.38629 1.38629 1.38629
2875 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2876 23 0.15719 3.27118 2.73043 3.16274 23 - -
2877 1.38629 1.38629 1.38629 1.38629
2878 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2879 24 3.30705 0.14631 3.36166 2.73626 24 - -
2880 1.38629 1.38629 1.38629 1.38629
2881 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2882 25 2.86982 3.47591 0.13017 3.36931 25 - -
2883 1.38629 1.38629 1.38629 1.38629
2884 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2885 26 0.15719 3.27118 2.73043 3.16274 26 - -
2886 1.38629 1.38629 1.38629 1.38629
2887 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2888 27 3.30705 0.14631 3.36166 2.73626 27 - -
2889 1.38629 1.38629 1.38629 1.38629
2890 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2891 28 3.30705 0.14631 3.36166 2.73626 28 - -
2892 1.38629 1.38629 1.38629 1.38629
2893 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2894 29 3.30705 0.14631 3.36166 2.73626 29 - -
2895 1.38629 1.38629 1.38629 1.38629
2896 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2897 30 2.86982 3.47591 0.13017 3.36931 30 - -
2898 1.38629 1.38629 1.38629 1.38629
2899 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2900 31 3.30705 0.14631 3.36166 2.73626 31 - -
2901 1.38629 1.38629 1.38629 1.38629
2902 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2903 32 2.97980 2.52563 3.03204 0.19727 32 - -
2904 1.38629 1.38629 1.38629 1.38629
2905 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2906 33 2.86982 3.47591 0.13017 3.36931 33 - -
2907 1.38629 1.38629 1.38629 1.38629
2908 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2909 34 0.15719 3.27118 2.73043 3.16274 34 - -
2910 1.38629 1.38629 1.38629 1.38629
2911 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2912 35 0.15719 3.27118 2.73043 3.16274 35 - -
2913 1.38629 1.38629 1.38629 1.38629
2914 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2915 36 2.97980 2.52563 3.03204 0.19727 36 - -
2916 1.38629 1.38629 1.38629 1.38629
2917 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2918 37 2.97980 2.52563 3.03204 0.19727 37 - -
2919 1.38629 1.38629 1.38629 1.38629
2920 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2921 38 2.97980 2.52563 3.03204 0.19727 38 - -
2922 1.38629 1.38629 1.38629 1.38629
2923 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2924 39 0.15719 3.27118 2.73043 3.16274 39 - -
2925 1.38629 1.38629 1.38629 1.38629
2926 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2927 40 0.15719 3.27118 2.73043 3.16274 40 - -
2928 1.38629 1.38629 1.38629 1.38629
2929 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2930 41 2.86982 3.47591 0.13017 3.36931 41 - -
2931 1.38629 1.38629 1.38629 1.38629
2932 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2933 42 3.30705 0.14631 3.36166 2.73626 42 - -
2934 1.38629 1.38629 1.38629 1.38629
2935 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2936 43 0.15719 3.27118 2.73043 3.16274 43 - -
2937 1.38629 1.38629 1.38629 1.38629
2938 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2939 44 2.97980 2.52563 3.03204 0.19727 44 - -
2940 1.38629 1.38629 1.38629 1.38629
2941 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2942 45 0.15719 3.27118 2.73043 3.16274 45 - -
2943 1.38629 1.38629 1.38629 1.38629
2944 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
2945 //
2946 HMMER3/b [3.0 | March 2010]
2947 NAME 4_LSU_Rhodophyta_4_LSU_start_two_long
2948 LENG 45
2949 ALPH DNA
2950 RF no
2951 CS no
2952 MAP yes
2953 DATE Wed Jan 25 22:09:31 2012
2954 NSEQ 3
2955 EFFN 3.000000
2956 CKSUM 1115734847
2957 STATS LOCAL MSV -8.1731 0.72021
2958 STATS LOCAL VITERBI -7.6315 0.72021
2959 STATS LOCAL FORWARD -3.7687 0.72021
2960 HMM A C G T
2961 m->m m->i m->d i->m i->i d->m d->d
2962 COMPO 1.11609 1.47103 1.43683 1.58438
2963 1.38629 1.38629 1.38629 1.38629
2964 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
2965 1 2.86982 3.47591 0.13017 3.36931 1 - -
2966 1.38629 1.38629 1.38629 1.38629
2967 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2968 2 2.86982 3.47591 0.13017 3.36931 2 - -
2969 1.38629 1.38629 1.38629 1.38629
2970 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2971 3 2.97980 2.52563 3.03204 0.19727 3 - -
2972 1.38629 1.38629 1.38629 1.38629
2973 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2974 4 2.86982 3.47591 0.13017 3.36931 4 - -
2975 1.38629 1.38629 1.38629 1.38629
2976 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2977 5 2.86982 3.47591 0.13017 3.36931 5 - -
2978 1.38629 1.38629 1.38629 1.38629
2979 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2980 6 0.15719 3.27118 2.73043 3.16274 6 - -
2981 1.38629 1.38629 1.38629 1.38629
2982 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2983 7 2.97980 2.52563 3.03204 0.19727 7 - -
2984 1.38629 1.38629 1.38629 1.38629
2985 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2986 8 3.30705 0.14631 3.36166 2.73626 8 - -
2987 1.38629 1.38629 1.38629 1.38629
2988 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2989 9 2.97980 2.52563 3.03204 0.19727 9 - -
2990 1.38629 1.38629 1.38629 1.38629
2991 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2992 10 3.30705 0.14631 3.36166 2.73626 10 - -
2993 1.38629 1.38629 1.38629 1.38629
2994 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2995 11 0.15719 3.27118 2.73043 3.16274 11 - -
2996 1.38629 1.38629 1.38629 1.38629
2997 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2998 12 0.15719 3.27118 2.73043 3.16274 12 - -
2999 1.38629 1.38629 1.38629 1.38629
3000 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3001 13 0.15719 3.27118 2.73043 3.16274 13 - -
3002 1.38629 1.38629 1.38629 1.38629
3003 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3004 14 2.97980 2.52563 3.03204 0.19727 14 - -
3005 1.38629 1.38629 1.38629 1.38629
3006 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3007 15 3.30705 0.14631 3.36166 2.73626 15 - -
3008 1.38629 1.38629 1.38629 1.38629
3009 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3010 16 0.15719 3.27118 2.73043 3.16274 16 - -
3011 1.38629 1.38629 1.38629 1.38629
3012 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3013 17 2.86982 3.47591 0.13017 3.36931 17 - -
3014 1.38629 1.38629 1.38629 1.38629
3015 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3016 18 0.15719 3.27118 2.73043 3.16274 18 - -
3017 1.38629 1.38629 1.38629 1.38629
3018 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3019 19 3.30705 0.14631 3.36166 2.73626 19 - -
3020 1.38629 1.38629 1.38629 1.38629
3021 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3022 20 0.15719 3.27118 2.73043 3.16274 20 - -
3023 1.38629 1.38629 1.38629 1.38629
3024 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3025 21 0.15719 3.27118 2.73043 3.16274 21 - -
3026 1.38629 1.38629 1.38629 1.38629
3027 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3028 22 2.86982 3.47591 0.13017 3.36931 22 - -
3029 1.38629 1.38629 1.38629 1.38629
3030 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3031 23 0.15719 3.27118 2.73043 3.16274 23 - -
3032 1.38629 1.38629 1.38629 1.38629
3033 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3034 24 3.30705 0.14631 3.36166 2.73626 24 - -
3035 1.38629 1.38629 1.38629 1.38629
3036 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3037 25 2.86982 3.47591 0.13017 3.36931 25 - -
3038 1.38629 1.38629 1.38629 1.38629
3039 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3040 26 0.15719 3.27118 2.73043 3.16274 26 - -
3041 1.38629 1.38629 1.38629 1.38629
3042 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3043 27 3.30705 0.14631 3.36166 2.73626 27 - -
3044 1.38629 1.38629 1.38629 1.38629
3045 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3046 28 3.30705 0.14631 3.36166 2.73626 28 - -
3047 1.38629 1.38629 1.38629 1.38629
3048 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3049 29 3.30705 0.14631 3.36166 2.73626 29 - -
3050 1.38629 1.38629 1.38629 1.38629
3051 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3052 30 2.86982 3.47591 0.13017 3.36931 30 - -
3053 1.38629 1.38629 1.38629 1.38629
3054 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3055 31 3.30705 0.14631 3.36166 2.73626 31 - -
3056 1.38629 1.38629 1.38629 1.38629
3057 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3058 32 2.97980 2.52563 3.03204 0.19727 32 - -
3059 1.38629 1.38629 1.38629 1.38629
3060 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3061 33 2.86982 3.47591 0.13017 3.36931 33 - -
3062 1.38629 1.38629 1.38629 1.38629
3063 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3064 34 0.15719 3.27118 2.73043 3.16274 34 - -
3065 1.38629 1.38629 1.38629 1.38629
3066 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3067 35 0.15719 3.27118 2.73043 3.16274 35 - -
3068 1.38629 1.38629 1.38629 1.38629
3069 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3070 36 2.97980 2.52563 3.03204 0.19727 36 - -
3071 1.38629 1.38629 1.38629 1.38629
3072 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3073 37 2.97980 2.52563 3.03204 0.19727 37 - -
3074 1.38629 1.38629 1.38629 1.38629
3075 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3076 38 2.97980 2.52563 3.03204 0.19727 38 - -
3077 1.38629 1.38629 1.38629 1.38629
3078 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3079 39 0.15719 3.27118 2.73043 3.16274 39 - -
3080 1.38629 1.38629 1.38629 1.38629
3081 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3082 40 0.15719 3.27118 2.73043 3.16274 40 - -
3083 1.38629 1.38629 1.38629 1.38629
3084 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3085 41 2.86982 3.47591 0.13017 3.36931 41 - -
3086 1.38629 1.38629 1.38629 1.38629
3087 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3088 42 3.30705 0.14631 3.36166 2.73626 42 - -
3089 1.38629 1.38629 1.38629 1.38629
3090 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3091 43 0.15719 3.27118 2.73043 3.16274 43 - -
3092 1.38629 1.38629 1.38629 1.38629
3093 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3094 44 2.97980 2.52563 3.03204 0.19727 44 - -
3095 1.38629 1.38629 1.38629 1.38629
3096 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3097 45 0.15719 3.27118 2.73043 3.16274 45 - -
3098 1.38629 1.38629 1.38629 1.38629
3099 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
3100 //
3101 HMMER3/b [3.0 | March 2010]
3102 NAME 1_SSU_Rhodophyta_1_SSU_end_long
3103 LENG 45
3104 ALPH DNA
3105 RF no
3106 CS no
3107 MAP yes
3108 DATE Wed Jan 25 21:06:17 2012
3109 NSEQ 95
3110 EFFN 3.348541
3111 CKSUM 2011377772
3112 STATS LOCAL MSV -7.9892 0.71931
3113 STATS LOCAL VITERBI -7.7135 0.71931
3114 STATS LOCAL FORWARD -4.1047 0.71931
3115 HMM A C G T
3116 m->m m->i m->d i->m i->i d->m d->d
3117 COMPO 1.32905 1.53799 1.25544 1.44601
3118 1.38629 1.38629 1.38629 1.38629
3119 0.03671 4.01612 4.01612 1.46634 0.26236 0.00000 *
3120 1 0.14081 3.38851 2.80728 3.29095 1 - -
3121 1.38629 1.38629 1.38629 1.38629
3122 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3123 2 2.95327 3.59611 0.11625 3.50165 2 - -
3124 1.38629 1.38629 1.38629 1.38629
3125 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3126 3 3.09694 2.60044 3.14477 0.17734 3 - -
3127 1.38629 1.38629 1.38629 1.38629
3128 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3129 4 3.44261 0.12908 3.49166 2.83591 4 - -
3130 1.38629 1.38629 1.38629 1.38629
3131 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3132 5 2.95327 3.59611 0.11625 3.50165 5 - -
3133 1.38629 1.38629 1.38629 1.38629
3134 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3135 6 3.09694 2.60044 3.14477 0.17734 6 - -
3136 1.38629 1.38629 1.38629 1.38629
3137 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3138 7 0.14081 3.38851 2.80728 3.29095 7 - -
3139 1.38629 1.38629 1.38629 1.38629
3140 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3141 8 0.14081 3.38851 2.80728 3.29095 8 - -
3142 1.38629 1.38629 1.38629 1.38629
3143 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3144 9 3.44261 0.12908 3.49166 2.83591 9 - -
3145 1.38629 1.38629 1.38629 1.38629
3146 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3147 10 0.14081 3.38851 2.80728 3.29095 10 - -
3148 1.38629 1.38629 1.38629 1.38629
3149 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3150 11 0.14081 3.38851 2.80728 3.29095 11 - -
3151 1.38629 1.38629 1.38629 1.38629
3152 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3153 12 2.95327 3.59611 0.11625 3.50165 12 - -
3154 1.38629 1.38629 1.38629 1.38629
3155 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3156 13 2.95327 3.59611 0.11625 3.50165 13 - -
3157 1.38629 1.38629 1.38629 1.38629
3158 0.09712 4.01612 2.59653 1.46634 0.26236 1.09861 0.40547
3159 14 2.64581 2.38647 2.37397 0.29573 14 - -
3160 1.38629 1.38629 1.38629 1.38629
3161 0.03895 3.95795 3.95795 1.46634 0.26236 0.39449 1.12093
3162 15 3.09694 2.60044 3.14477 0.17734 15 - -
3163 1.38629 1.38629 1.38629 1.38629
3164 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3165 16 3.09694 2.60044 3.14477 0.17734 16 - -
3166 1.38629 1.38629 1.38629 1.38629
3167 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3168 17 3.44261 0.12908 3.49166 2.83591 17 - -
3169 1.38629 1.38629 1.38629 1.38629
3170 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3171 18 3.44261 0.12908 3.49166 2.83591 18 - -
3172 1.38629 1.38629 1.38629 1.38629
3173 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3174 19 2.95327 3.59611 0.11625 3.50165 19 - -
3175 1.38629 1.38629 1.38629 1.38629
3176 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3177 20 3.09694 2.60044 3.14477 0.17734 20 - -
3178 1.38629 1.38629 1.38629 1.38629
3179 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3180 21 0.14081 3.38851 2.80728 3.29095 21 - -
3181 1.38629 1.38629 1.38629 1.38629
3182 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3183 22 2.95327 3.59611 0.11625 3.50165 22 - -
3184 1.38629 1.38629 1.38629 1.38629
3185 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3186 23 2.95327 3.59611 0.11625 3.50165 23 - -
3187 1.38629 1.38629 1.38629 1.38629
3188 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3189 24 3.09694 2.60044 3.14477 0.17734 24 - -
3190 1.38629 1.38629 1.38629 1.38629
3191 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3192 25 2.95327 3.59611 0.11625 3.50165 25 - -
3193 1.38629 1.38629 1.38629 1.38629
3194 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3195 26 0.14081 3.38851 2.80728 3.29095 26 - -
3196 1.38629 1.38629 1.38629 1.38629
3197 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3198 27 0.14081 3.38851 2.80728 3.29095 27 - -
3199 1.38629 1.38629 1.38629 1.38629
3200 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3201 28 3.44261 0.12908 3.49166 2.83591 28 - -
3202 1.38629 1.38629 1.38629 1.38629
3203 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3204 29 3.44261 0.12908 3.49166 2.83591 29 - -
3205 1.38629 1.38629 1.38629 1.38629
3206 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3207 30 3.09694 2.60044 3.14477 0.17734 30 - -
3208 1.38629 1.38629 1.38629 1.38629
3209 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3210 31 2.49053 2.77369 0.31322 2.09058 31 - -
3211 1.38629 1.38629 1.38629 1.38629
3212 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3213 32 3.44261 0.12908 3.49166 2.83591 32 - -
3214 1.38629 1.38629 1.38629 1.38629
3215 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3216 33 2.95327 3.59611 0.11625 3.50165 33 - -
3217 1.38629 1.38629 1.38629 1.38629
3218 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3219 34 2.95327 3.59611 0.11625 3.50165 34 - -
3220 1.38629 1.38629 1.38629 1.38629
3221 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3222 35 0.14081 3.38851 2.80728 3.29095 35 - -
3223 1.38629 1.38629 1.38629 1.38629
3224 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3225 36 0.14081 3.38851 2.80728 3.29095 36 - -
3226 1.38629 1.38629 1.38629 1.38629
3227 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3228 37 2.95327 3.59611 0.11625 3.50165 37 - -
3229 1.38629 1.38629 1.38629 1.38629
3230 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3231 38 2.95327 3.59611 0.11625 3.50165 38 - -
3232 1.38629 1.38629 1.38629 1.38629
3233 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3234 39 0.14081 3.38851 2.80728 3.29095 39 - -
3235 1.38629 1.38629 1.38629 1.38629
3236 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3237 40 3.09694 2.60044 3.14477 0.17734 40 - -
3238 1.38629 1.38629 1.38629 1.38629
3239 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3240 41 3.44261 0.12908 3.49166 2.83591 41 - -
3241 1.38629 1.38629 1.38629 1.38629
3242 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3243 42 0.14081 3.38851 2.80728 3.29095 42 - -
3244 1.38629 1.38629 1.38629 1.38629
3245 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3246 43 3.09694 2.60044 3.14477 0.17734 43 - -
3247 1.38629 1.38629 1.38629 1.38629
3248 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3249 44 3.09694 2.60044 3.14477 0.17734 44 - -
3250 1.38629 1.38629 1.38629 1.38629
3251 0.03671 4.01612 4.01612 1.46634 0.26236 1.09861 0.40547
3252 45 3.44261 0.12908 3.49166 2.83591 45 - -
3253 1.38629 1.38629 1.38629 1.38629
3254 0.01852 3.99793 * 1.46634 0.26236 0.00000 *
3255 //
3256 HMMER3/b [3.0 | March 2010]
3257 NAME 3_End_Rhodophyta_58S_end_seven_long
3258 LENG 45
3259 ALPH DNA
3260 RF no
3261 CS no
3262 MAP yes
3263 DATE Fri Nov 16 22:26:26 2012
3264 NSEQ 17
3265 EFFN 3.258057
3266 CKSUM 99854956
3267 STATS LOCAL MSV -7.9161 0.71933
3268 STATS LOCAL VITERBI -7.6864 0.71933
3269 STATS LOCAL FORWARD -4.2261 0.71933
3270 HMM A C G T
3271 m->m m->i m->d i->m i->i d->m d->d
3272 COMPO 1.82088 1.31276 1.14101 1.38812
3273 1.38629 1.38629 1.38629 1.38629
3274 0.03733 3.99968 3.99968 1.46634 0.26236 0.00000 *
3275 1 2.93288 3.56649 0.11951 3.46896 1 - -
3276 1.38629 1.38629 1.38629 1.38629
3277 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3278 2 3.40899 0.13312 3.45947 2.81141 2 - -
3279 1.38629 1.38629 1.38629 1.38629
3280 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3281 3 2.93288 3.56649 0.11951 3.46896 3 - -
3282 1.38629 1.38629 1.38629 1.38629
3283 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3284 4 3.40899 0.13312 3.45947 2.81141 4 - -
3285 1.38629 1.38629 1.38629 1.38629
3286 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3287 5 3.06755 2.58173 3.11650 0.18211 5 - -
3288 1.38629 1.38629 1.38629 1.38629
3289 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3290 6 3.40899 0.13312 3.45947 2.81141 6 - -
3291 1.38629 1.38629 1.38629 1.38629
3292 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3293 7 2.93288 3.56649 0.11951 3.46896 7 - -
3294 1.38629 1.38629 1.38629 1.38629
3295 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3296 8 3.40899 0.13312 3.45947 2.81141 8 - -
3297 1.38629 1.38629 1.38629 1.38629
3298 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3299 9 2.93288 3.56649 0.11951 3.46896 9 - -
3300 1.38629 1.38629 1.38629 1.38629
3301 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3302 10 2.93288 3.56649 0.11951 3.46896 10 - -
3303 1.38629 1.38629 1.38629 1.38629
3304 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3305 11 2.93288 3.56649 0.11951 3.46896 11 - -
3306 1.38629 1.38629 1.38629 1.38629
3307 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3308 12 3.06755 2.58173 3.11650 0.18211 12 - -
3309 1.38629 1.38629 1.38629 1.38629
3310 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3311 13 0.14469 3.35935 2.78832 3.25904 13 - -
3312 1.38629 1.38629 1.38629 1.38629
3313 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3314 14 0.14469 3.35935 2.78832 3.25904 14 - -
3315 1.38629 1.38629 1.38629 1.38629
3316 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3317 15 3.40899 0.13312 3.45947 2.81141 15 - -
3318 1.38629 1.38629 1.38629 1.38629
3319 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3320 16 3.40899 0.13312 3.45947 2.81141 16 - -
3321 1.38629 1.38629 1.38629 1.38629
3322 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3323 17 3.40899 0.13312 3.45947 2.81141 17 - -
3324 1.38629 1.38629 1.38629 1.38629
3325 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3326 18 3.06755 2.58173 3.11650 0.18211 18 - -
3327 1.38629 1.38629 1.38629 1.38629
3328 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3329 19 2.93288 3.56649 0.11951 3.46896 19 - -
3330 1.38629 1.38629 1.38629 1.38629
3331 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3332 20 3.40899 0.13312 3.45947 2.81141 20 - -
3333 1.38629 1.38629 1.38629 1.38629
3334 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3335 21 2.93288 3.56649 0.11951 3.46896 21 - -
3336 1.38629 1.38629 1.38629 1.38629
3337 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3338 22 0.14469 3.35935 2.78832 3.25904 22 - -
3339 1.38629 1.38629 1.38629 1.38629
3340 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3341 23 2.93288 3.56649 0.11951 3.46896 23 - -
3342 1.38629 1.38629 1.38629 1.38629
3343 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3344 24 3.40899 0.13312 3.45947 2.81141 24 - -
3345 1.38629 1.38629 1.38629 1.38629
3346 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3347 25 0.14469 3.35935 2.78832 3.25904 25 - -
3348 1.38629 1.38629 1.38629 1.38629
3349 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3350 26 3.06755 2.58173 3.11650 0.18211 26 - -
3351 1.38629 1.38629 1.38629 1.38629
3352 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3353 27 2.93288 3.56649 0.11951 3.46896 27 - -
3354 1.38629 1.38629 1.38629 1.38629
3355 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3356 28 3.06755 2.58173 3.11650 0.18211 28 - -
3357 1.38629 1.38629 1.38629 1.38629
3358 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3359 29 3.40899 0.13312 3.45947 2.81141 29 - -
3360 1.38629 1.38629 1.38629 1.38629
3361 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3362 30 3.06755 2.58173 3.11650 0.18211 30 - -
3363 1.38629 1.38629 1.38629 1.38629
3364 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3365 31 2.93288 3.56649 0.11951 3.46896 31 - -
3366 1.38629 1.38629 1.38629 1.38629
3367 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3368 32 3.06755 2.58173 3.11650 0.18211 32 - -
3369 1.38629 1.38629 1.38629 1.38629
3370 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3371 33 3.06755 2.58173 3.11650 0.18211 33 - -
3372 1.38629 1.38629 1.38629 1.38629
3373 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3374 34 3.06755 2.58173 3.11650 0.18211 34 - -
3375 1.38629 1.38629 1.38629 1.38629
3376 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3377 35 2.93288 3.56649 0.11951 3.46896 35 - -
3378 1.38629 1.38629 1.38629 1.38629
3379 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3380 36 0.14469 3.35935 2.78832 3.25904 36 - -
3381 1.38629 1.38629 1.38629 1.38629
3382 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3383 37 2.93288 3.56649 0.11951 3.46896 37 - -
3384 1.38629 1.38629 1.38629 1.38629
3385 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3386 38 2.60196 1.60547 2.66720 0.42216 38 - -
3387 1.38629 1.38629 1.38629 1.38629
3388 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3389 39 2.93288 3.56649 0.11951 3.46896 39 - -
3390 1.38629 1.38629 1.38629 1.38629
3391 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3392 40 3.06755 2.58173 3.11650 0.18211 40 - -
3393 1.38629 1.38629 1.38629 1.38629
3394 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3395 41 3.40899 0.13312 3.45947 2.81141 41 - -
3396 1.38629 1.38629 1.38629 1.38629
3397 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3398 42 3.40899 0.13312 3.45947 2.81141 42 - -
3399 1.38629 1.38629 1.38629 1.38629
3400 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3401 43 2.93288 3.56649 0.11951 3.46896 43 - -
3402 1.38629 1.38629 1.38629 1.38629
3403 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3404 44 3.06755 2.58173 3.11650 0.18211 44 - -
3405 1.38629 1.38629 1.38629 1.38629
3406 0.03733 3.99968 3.99968 1.46634 0.26236 1.09861 0.40547
3407 45 0.14469 3.35935 2.78832 3.25904 45 - -
3408 1.38629 1.38629 1.38629 1.38629
3409 0.01884 3.98119 * 1.46634 0.26236 0.00000 *
3410 //
3411 HMMER3/b [3.0 | March 2010]
3412 NAME 3_End_Rhodophyta_58S_end_five_long
3413 LENG 45
3414 ALPH DNA
3415 RF no
3416 CS no
3417 MAP yes
3418 DATE Fri Nov 16 22:25:48 2012
3419 NSEQ 7
3420 EFFN 3.305176
3421 CKSUM 4199574871
3422 STATS LOCAL MSV -8.1908 0.71932
3423 STATS LOCAL VITERBI -7.8570 0.71932
3424 STATS LOCAL FORWARD -4.1151 0.71932
3425 HMM A C G T
3426 m->m m->i m->d i->m i->i d->m d->d
3427 COMPO 1.92875 1.60184 1.14085 1.09782
3428 1.38629 1.38629 1.38629 1.38629
3429 0.03701 4.00827 4.00827 1.46634 0.26236 0.00000 *
3430 1 2.94360 3.58205 0.11779 3.48613 1 - -
3431 1.38629 1.38629 1.38629 1.38629
3432 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3433 2 3.42663 0.13098 3.47636 2.82428 2 - -
3434 1.38629 1.38629 1.38629 1.38629
3435 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3436 3 3.08294 2.59153 3.13131 0.17959 3 - -
3437 1.38629 1.38629 1.38629 1.38629
3438 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3439 4 3.42663 0.13098 3.47636 2.82428 4 - -
3440 1.38629 1.38629 1.38629 1.38629
3441 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3442 5 0.14264 3.37464 2.79827 3.27577 5 - -
3443 1.38629 1.38629 1.38629 1.38629
3444 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3445 6 3.08294 2.59153 3.13131 0.17959 6 - -
3446 1.38629 1.38629 1.38629 1.38629
3447 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3448 7 2.94360 3.58205 0.11779 3.48613 7 - -
3449 1.38629 1.38629 1.38629 1.38629
3450 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3451 8 3.08294 2.59153 3.13131 0.17959 8 - -
3452 1.38629 1.38629 1.38629 1.38629
3453 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3454 9 3.42663 0.13098 3.47636 2.82428 9 - -
3455 1.38629 1.38629 1.38629 1.38629
3456 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3457 10 3.42663 0.13098 3.47636 2.82428 10 - -
3458 1.38629 1.38629 1.38629 1.38629
3459 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3460 11 2.94360 3.58205 0.11779 3.48613 11 - -
3461 1.38629 1.38629 1.38629 1.38629
3462 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3463 12 2.94360 3.58205 0.11779 3.48613 12 - -
3464 1.38629 1.38629 1.38629 1.38629
3465 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3466 13 2.94360 3.58205 0.11779 3.48613 13 - -
3467 1.38629 1.38629 1.38629 1.38629
3468 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3469 14 3.08294 2.59153 3.13131 0.17959 14 - -
3470 1.38629 1.38629 1.38629 1.38629
3471 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3472 15 2.94360 3.58205 0.11779 3.48613 15 - -
3473 1.38629 1.38629 1.38629 1.38629
3474 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3475 16 2.94360 3.58205 0.11779 3.48613 16 - -
3476 1.38629 1.38629 1.38629 1.38629
3477 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3478 17 0.14264 3.37464 2.79827 3.27577 17 - -
3479 1.38629 1.38629 1.38629 1.38629
3480 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3481 18 3.08294 2.59153 3.13131 0.17959 18 - -
3482 1.38629 1.38629 1.38629 1.38629
3483 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3484 19 2.94360 3.58205 0.11779 3.48613 19 - -
3485 1.38629 1.38629 1.38629 1.38629
3486 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3487 20 3.08294 2.59153 3.13131 0.17959 20 - -
3488 1.38629 1.38629 1.38629 1.38629
3489 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3490 21 2.94360 3.58205 0.11779 3.48613 21 - -
3491 1.38629 1.38629 1.38629 1.38629
3492 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3493 22 0.14264 3.37464 2.79827 3.27577 22 - -
3494 1.38629 1.38629 1.38629 1.38629
3495 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3496 23 2.94360 3.58205 0.11779 3.48613 23 - -
3497 1.38629 1.38629 1.38629 1.38629
3498 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3499 24 3.42663 0.13098 3.47636 2.82428 24 - -
3500 1.38629 1.38629 1.38629 1.38629
3501 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3502 25 0.14264 3.37464 2.79827 3.27577 25 - -
3503 1.38629 1.38629 1.38629 1.38629
3504 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3505 26 3.08294 2.59153 3.13131 0.17959 26 - -
3506 1.38629 1.38629 1.38629 1.38629
3507 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3508 27 2.94360 3.58205 0.11779 3.48613 27 - -
3509 1.38629 1.38629 1.38629 1.38629
3510 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3511 28 3.42663 0.13098 3.47636 2.82428 28 - -
3512 1.38629 1.38629 1.38629 1.38629
3513 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3514 29 3.42663 0.13098 3.47636 2.82428 29 - -
3515 1.38629 1.38629 1.38629 1.38629
3516 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3517 30 3.08294 2.59153 3.13131 0.17959 30 - -
3518 1.38629 1.38629 1.38629 1.38629
3519 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3520 31 2.94360 3.58205 0.11779 3.48613 31 - -
3521 1.38629 1.38629 1.38629 1.38629
3522 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3523 32 3.08294 2.59153 3.13131 0.17959 32 - -
3524 1.38629 1.38629 1.38629 1.38629
3525 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3526 33 3.08294 2.59153 3.13131 0.17959 33 - -
3527 1.38629 1.38629 1.38629 1.38629
3528 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3529 34 3.08294 2.59153 3.13131 0.17959 34 - -
3530 1.38629 1.38629 1.38629 1.38629
3531 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3532 35 2.94360 3.58205 0.11779 3.48613 35 - -
3533 1.38629 1.38629 1.38629 1.38629
3534 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3535 36 0.14264 3.37464 2.79827 3.27577 36 - -
3536 1.38629 1.38629 1.38629 1.38629
3537 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3538 37 2.94360 3.58205 0.11779 3.48613 37 - -
3539 1.38629 1.38629 1.38629 1.38629
3540 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3541 38 3.08294 2.59153 3.13131 0.17959 38 - -
3542 1.38629 1.38629 1.38629 1.38629
3543 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3544 39 2.94360 3.58205 0.11779 3.48613 39 - -
3545 1.38629 1.38629 1.38629 1.38629
3546 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3547 40 3.08294 2.59153 3.13131 0.17959 40 - -
3548 1.38629 1.38629 1.38629 1.38629
3549 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3550 41 3.42663 0.13098 3.47636 2.82428 41 - -
3551 1.38629 1.38629 1.38629 1.38629
3552 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3553 42 3.08294 2.59153 3.13131 0.17959 42 - -
3554 1.38629 1.38629 1.38629 1.38629
3555 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3556 43 3.08294 2.59153 3.13131 0.17959 43 - -
3557 1.38629 1.38629 1.38629 1.38629
3558 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3559 44 3.08294 2.59153 3.13131 0.17959 44 - -
3560 1.38629 1.38629 1.38629 1.38629
3561 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
3562 45 3.08294 2.59153 3.13131 0.17959 45 - -
3563 1.38629 1.38629 1.38629 1.38629
3564 0.01867 3.98994 * 1.46634 0.26236 0.00000 *
3565 //
3566 HMMER3/b [3.0 | March 2010]
3567 NAME 3_End_Rhodophyta_58S_end_six_long
3568 LENG 45
3569 ALPH DNA
3570 RF no
3571 CS no
3572 MAP yes
3573 DATE Fri Nov 16 22:25:59 2012
3574 NSEQ 7
3575 EFFN 3.264160
3576 CKSUM 2681386467
3577 STATS LOCAL MSV -7.8266 0.71931
3578 STATS LOCAL VITERBI -7.7527 0.71931
3579 STATS LOCAL FORWARD -4.1975 0.71931
3580 HMM A C G T
3581 m->m m->i m->d i->m i->i d->m d->d
3582 COMPO 1.72557 1.38143 1.25532 1.25273
3583 1.38629 1.38629 1.38629 1.38629
3584 0.03729 4.00080 4.00080 1.46634 0.26236 0.00000 *
3585 1 2.93428 3.56852 0.11929 3.47120 1 - -
3586 1.38629 1.38629 1.38629 1.38629
3587 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3588 2 3.41129 0.13284 3.46167 2.81309 2 - -
3589 1.38629 1.38629 1.38629 1.38629
3590 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3591 3 2.93428 3.56852 0.11929 3.47120 3 - -
3592 1.38629 1.38629 1.38629 1.38629
3593 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3594 4 3.41129 0.13284 3.46167 2.81309 4 - -
3595 1.38629 1.38629 1.38629 1.38629
3596 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3597 5 3.06955 2.58301 3.11843 0.18178 5 - -
3598 1.38629 1.38629 1.38629 1.38629
3599 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3600 6 3.41129 0.13284 3.46167 2.81309 6 - -
3601 1.38629 1.38629 1.38629 1.38629
3602 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3603 7 3.06955 2.58301 3.11843 0.18178 7 - -
3604 1.38629 1.38629 1.38629 1.38629
3605 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3606 8 3.41129 0.13284 3.46167 2.81309 8 - -
3607 1.38629 1.38629 1.38629 1.38629
3608 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3609 9 2.93428 3.56852 0.11929 3.47120 9 - -
3610 1.38629 1.38629 1.38629 1.38629
3611 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3612 10 2.93428 3.56852 0.11929 3.47120 10 - -
3613 1.38629 1.38629 1.38629 1.38629
3614 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3615 11 2.93428 3.56852 0.11929 3.47120 11 - -
3616 1.38629 1.38629 1.38629 1.38629
3617 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3618 12 3.06955 2.58301 3.11843 0.18178 12 - -
3619 1.38629 1.38629 1.38629 1.38629
3620 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3621 13 0.14442 3.36134 2.78962 3.26122 13 - -
3622 1.38629 1.38629 1.38629 1.38629
3623 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3624 14 0.14442 3.36134 2.78962 3.26122 14 - -
3625 1.38629 1.38629 1.38629 1.38629
3626 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3627 15 3.41129 0.13284 3.46167 2.81309 15 - -
3628 1.38629 1.38629 1.38629 1.38629
3629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3630 16 3.41129 0.13284 3.46167 2.81309 16 - -
3631 1.38629 1.38629 1.38629 1.38629
3632 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3633 17 3.41129 0.13284 3.46167 2.81309 17 - -
3634 1.38629 1.38629 1.38629 1.38629
3635 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3636 18 3.06955 2.58301 3.11843 0.18178 18 - -
3637 1.38629 1.38629 1.38629 1.38629
3638 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3639 19 2.93428 3.56852 0.11929 3.47120 19 - -
3640 1.38629 1.38629 1.38629 1.38629
3641 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3642 20 0.14442 3.36134 2.78962 3.26122 20 - -
3643 1.38629 1.38629 1.38629 1.38629
3644 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3645 21 2.93428 3.56852 0.11929 3.47120 21 - -
3646 1.38629 1.38629 1.38629 1.38629
3647 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3648 22 0.14442 3.36134 2.78962 3.26122 22 - -
3649 1.38629 1.38629 1.38629 1.38629
3650 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3651 23 2.93428 3.56852 0.11929 3.47120 23 - -
3652 1.38629 1.38629 1.38629 1.38629
3653 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3654 24 3.41129 0.13284 3.46167 2.81309 24 - -
3655 1.38629 1.38629 1.38629 1.38629
3656 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3657 25 0.14442 3.36134 2.78962 3.26122 25 - -
3658 1.38629 1.38629 1.38629 1.38629
3659 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3660 26 3.06955 2.58301 3.11843 0.18178 26 - -
3661 1.38629 1.38629 1.38629 1.38629
3662 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3663 27 2.93428 3.56852 0.11929 3.47120 27 - -
3664 1.38629 1.38629 1.38629 1.38629
3665 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3666 28 3.06955 2.58301 3.11843 0.18178 28 - -
3667 1.38629 1.38629 1.38629 1.38629
3668 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3669 29 3.41129 0.13284 3.46167 2.81309 29 - -
3670 1.38629 1.38629 1.38629 1.38629
3671 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3672 30 3.06955 2.58301 3.11843 0.18178 30 - -
3673 1.38629 1.38629 1.38629 1.38629
3674 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3675 31 2.93428 3.56852 0.11929 3.47120 31 - -
3676 1.38629 1.38629 1.38629 1.38629
3677 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3678 32 3.06955 2.58301 3.11843 0.18178 32 - -
3679 1.38629 1.38629 1.38629 1.38629
3680 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3681 33 3.06955 2.58301 3.11843 0.18178 33 - -
3682 1.38629 1.38629 1.38629 1.38629
3683 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3684 34 3.06955 2.58301 3.11843 0.18178 34 - -
3685 1.38629 1.38629 1.38629 1.38629
3686 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3687 35 2.93428 3.56852 0.11929 3.47120 35 - -
3688 1.38629 1.38629 1.38629 1.38629
3689 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3690 36 0.14442 3.36134 2.78962 3.26122 36 - -
3691 1.38629 1.38629 1.38629 1.38629
3692 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3693 37 2.93428 3.56852 0.11929 3.47120 37 - -
3694 1.38629 1.38629 1.38629 1.38629
3695 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3696 38 3.06955 2.58301 3.11843 0.18178 38 - -
3697 1.38629 1.38629 1.38629 1.38629
3698 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3699 39 2.93428 3.56852 0.11929 3.47120 39 - -
3700 1.38629 1.38629 1.38629 1.38629
3701 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3702 40 3.06955 2.58301 3.11843 0.18178 40 - -
3703 1.38629 1.38629 1.38629 1.38629
3704 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3705 41 3.41129 0.13284 3.46167 2.81309 41 - -
3706 1.38629 1.38629 1.38629 1.38629
3707 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3708 42 0.14442 3.36134 2.78962 3.26122 42 - -
3709 1.38629 1.38629 1.38629 1.38629
3710 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3711 43 3.41129 0.13284 3.46167 2.81309 43 - -
3712 1.38629 1.38629 1.38629 1.38629
3713 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3714 44 3.06955 2.58301 3.11843 0.18178 44 - -
3715 1.38629 1.38629 1.38629 1.38629
3716 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
3717 45 3.06955 2.58301 3.11843 0.18178 45 - -
3718 1.38629 1.38629 1.38629 1.38629
3719 0.01882 3.98232 * 1.46634 0.26236 0.00000 *
3720 //