Mercurial > repos > aafc-mbb > itsx
comparison test-data/testITSsequences.fasta @ 0:57e76d405a97 draft default tip
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| author | aafc-mbb |
|---|---|
| date | Mon, 14 Mar 2016 16:15:08 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:57e76d405a97 |
|---|---|
| 1 >gi|150439140|emb|AM747290.1| Homobasidiomycete sp. BM63-1206 SSU gene, ITS1, 5.8S rRNA gene, ITS2 and partial LSU gene, clone BM63-1206 | |
| 2 GTACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAATGAATTCAAGAGAGTTGATGCTGGCGGTC | |
| 3 TTGTGGCTGCATGTGCTCGCTCTCCTAATCCAATTTACACCTGTGCACTTAACTTTGAAGGGAGGGTAAA | |
| 4 ACCTGCCTTCGAAATCTTTAAACTCTTATATAACGAATGTTTATCTGCCGCAAGGCAAAATTTAATACAA | |
| 5 CTTTTAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAAT | |
| 6 TGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCACGCCT | |
| 7 GTTCGAGTGTCATGAAACTCTCAAGCAAGATAGATTTATTTCTATCTCTGTTTGGATATGGACTCTGCCG | |
| 8 CGTCAATGCGGCTGGTCTTAAATATATTAGCTGGTCCTAGTGAAGGTTTGGTTCTACTCAGCATGATAAT | |
| 9 TATCTGATGTTGAGGACAGTCTTAGGACTGGCCAGGCTCTCTCTGGATTGCTTCTAATCGTCTTTGGACA | |
| 10 ATTAATCAATATCTGACCTCGAATCAGGTGGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA | |
| 11 AAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGATGAGCTCAAATTTAAAATCTGGTA | |
| 12 GCCTTTGGTTGCCCGAGTTGTAATCTAGAGAAGCGTTTTCCGTGCTGGACTGTGTACAAGTTTCCTGGAT | |
| 13 ACGGAACATCATAGAGGGTGAGAATCCCGTCCTTGACACAGACTCCCAGTGCTTTGTGATGCGCTCTCAA | |
| 14 CGAGTCGAGTTGTTTGGGATTGCAGCTCAAAATGGGAGGTAAATTCCTTCTAAAGCTAAATATTGGCGAG | |
| 15 AGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGT | |
| 16 GAAATTGTTAAAAGGGAAACGATTGAAGTCAGTCGCGTCTACTTGGACTCAGCCTTACCTCGGTTTGGTG | |
| 17 CATTTCCTTGTGGACGGGCCAGTGTCCATGTTGATTGCTGGAAAAGGTTCAGGGGAATGTGGCTCTTTTA | |
| 18 GAGTGTTATAGCCTCTGTTCATATACAGTAGTTGATATGGAGTGATACAGCATGCTTCGGCGGTGCTTGT | |
| 19 ACTGGCATAATGGCTT | |
| 20 | |
| 21 >gi|50874860|emb|AJ634045.1| Roccella tuberculata partial SSU rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial LSU rRNA gene, specimen voucher 8225 (S) | |
| 22 GAACCTGCGGAAGGATCATTATTAGAGACAGGGCCTGTCTAGGCCCGACCTCCAACCCCCTGTCTACCTA | |
| 23 CCTATTGTTGCTTTGGCGGTGCGTCTGGTGCTTGCCGCACGCGTTACGGCTAAGAACCGCCAGTGGCCCG | |
| 24 GCGTGCGCCAGGCCGCTGAGTCGCCGTCAAGGGGCTACTTCTAAATTCTCCGCACCAGTAAGCCGTCTAA | |
| 25 GAGGAACTTGCAAAATAATCGCCTCGAAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAG | |
| 26 AACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCT | |
| 27 TGCGCCCCCCGGTATCCCGGTGGGCATGCCTGTTCGAGCGTCATTAAAATCATCAAGCACCGCTTGGTAT | |
| 28 TGGGTCTGACGTCCCTACACCCGCAGAGGGACGTACCCTAAAACCCTCGGCAACGTCCCGTGGCCGTAGG | |
| 29 CGTAGCGGAATATGATCTTTACCACGTCTGCGAGGCGCACGAGGTCGTCCGGCCCCTCTGAATCTTAAAC | |
| 30 GTCTACTAGAACCTTACCGTTGACCTCGGATCAGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAG | |
| 31 CGGAGGA | |
| 32 | |
| 33 >gi|50874843|emb|AJ634028.1| Roccella phycopsis partial SSU rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial LSU rRNA gene, specimen voucher 8150a (S) | |
| 34 GAACCTGCGGAAGGATCATTATTAGAGATAGGGCCTGTCTAGGTCCGACCTCCAACCCCCTGTTTACCTA | |
| 35 ACCCATTGTTGCTTTGGCGATGCGTCTGGTGCTCGCCGTACGCGTTACGGCTAAGCACCGCCGGTGGCCC | |
| 36 GGTGTACGCGGGGTCGCTGAGTCGTCGTCAAGGGGCTACTTCTAAATTCTCCGTACTAGCAAGTCGTCTT | |
| 37 AAGAGCAACTTTTTGAAATAATCGCCTCGAAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATG | |
| 38 AAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCA | |
| 39 TCTTGCGCCCTCCGGTACCCCGGTGGGCATGCCTGTTCGAGCGTCATTAAAATCATCAAGCACCGCTTGG | |
| 40 TATTGGGTCAGACGTCCCTGCACTCGCAGAGGGACGTACCCTAAACCCCTCGGCAACGTCCCGTGGCCGT | |
| 41 AGACGTAGCGGAATATACAATCTTTACCATGTCTGCGAGGCGCGCGAGGTCGTCTAGCCCCTCCGAATCT | |
| 42 TAACGTAGAACCTTAACCGTTGGCCACGGATCAGGC |