Mercurial > repos > abaizan > kodoja
diff test-data/kraken_databases.loc @ 0:18fe33eb7775 draft
Uploaded kodoja_search.py v0.0.3 wrapper.
https://github.com/abaizan/kodoja_galaxy/commit/55004d41a9c0750b2543f394594ee58cc4426609
| author | peterjc |
|---|---|
| date | Wed, 14 Mar 2018 12:46:57 -0400 |
| parents | |
| children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/kraken_databases.loc Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,15 @@ +# This is a tab-separated file listing any Kraken databases +# available locally for tool wrapper tests. +# +# - Column 1 - value, the key which Galaxy will record in DB +# - Column 2 - name, the text caption which Galaxy show users +# - Column 3 - path, the directory name (which will contain +# files named ``database.idx``, ``database.kdb`` and a +# sub-directory named taxonomy containing files from the +# NCBI named ``names.dmp`` and ``nodes.dmp`` +# +# e.g. +# +# plants_dec_2017(tab)Plants (December 2017)(tab)/mnt/shared/kraken_db/plants_2017_12/ +# +kraken3viruses Sample databse using k18 m5 and three viruses ${__HERE__}/krakenDB_test