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diff test-data/read_table_PE_fastq.tabular @ 3:d4111d1de76f draft default tip

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v0.0.8, expose kodoja_VRL.tsv output
author peterjc
date Fri, 14 Sep 2018 09:55:56 -0400
parents
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/read_table_PE_fastq.tabular	Fri Sep 14 09:55:56 2018 -0400
@@ -0,0 +1,95 @@
+kraken_classified	Seq_ID	kraken_tax_ID	kraken_seq_tax	kaiju_classified	kaiju_tax_ID	kaiju_seq_tax	combined_result
+C	SRR3466597.2160184	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.1867187	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.1714296	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.979054	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.1842453	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.1967334	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.881543	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.2337588	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.1545177	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.1972168	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.431651	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	U	0		
+C	SRR3466597.1360962	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.1276425	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.833605	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	U	0		
+C	SRR3466597.1371609	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.899074	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.2102827	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.847861	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.1902260	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.29276	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	SRR3466597.1001991	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	C	12227	d__Viruses|f__Potyviridae|g__Potyvirus|s__Tobacco_etch_virus	12227.0
+C	ERR996011.39031	946046	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Ugandan_cassava_brown_streak_virus	C	946046	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Ugandan_cassava_brown_streak_virus	946046.0
+C	ERR996011.157056	946046	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Ugandan_cassava_brown_streak_virus	C	946046	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Ugandan_cassava_brown_streak_virus	946046.0
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+C	ERR996013.1249443	137758	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Cassava_brown_streak_virus	C	137758	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Cassava_brown_streak_virus	137758.0
+C	ERR996013.1295292	137758	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Cassava_brown_streak_virus	C	137758	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Cassava_brown_streak_virus	137758.0
+C	ERR996013.1301772	137758	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Cassava_brown_streak_virus	C	137758	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Cassava_brown_streak_virus	137758.0
+C	ERR996013.1308814	137758	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Cassava_brown_streak_virus	C	137758	d__Viruses|f__Potyviridae|g__Ipomovirus|s__Cassava_brown_streak_virus	137758.0