Mercurial > repos > alenail > chipsequtil

diff chipsequtil/map_to_known_genes/tool_dependencies.xml @ 22:63dace20719b draft

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author alenail
date Wed, 13 Apr 2016 17:36:07 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/chipsequtil/map_to_known_genes/tool_dependencies.xml	Wed Apr 13 17:36:07 2016 -0400
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+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="chipsequtil" version="1.0">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">https://github.com/fraenkel-lab/chipsequtil/archive/master.zip</action>
+                <action type="shell_command">cp org_settings.cfg src/chipsequtil/</action>
+                <action type="shell_command">python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                    <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme></readme>
+    </package>
+</tool_dependency>