view chipsequtil/map_to_known_genes/tool_dependencies.xml @ 27:8cdddb76c44f draft

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author alenail
date Wed, 13 Apr 2016 18:10:26 -0400
parents 63dace20719b
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<?xml version="1.0"?>
<tool_dependency>
    <package name="chipsequtil" version="1.0">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://github.com/fraenkel-lab/chipsequtil/archive/master.zip</action>
                <action type="shell_command">cp org_settings.cfg src/chipsequtil/</action>
                <action type="shell_command">python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                    <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
                </action>
            </actions>
        </install>
        <readme></readme>
    </package>
</tool_dependency>