# HG changeset patch
# User alenail
# Date 1460671218 14400
# Node ID b9b2be216c05c5b386f389045f0f862d03f171f7
# Parent  d7baa700a9306cb22cba515aead0f141e8ac83fd
Uploaded

diff -r d7baa700a930 -r b9b2be216c05 pieplot_macs/pieplots_macs.py
--- a/pieplot_macs/pieplots_macs.py	Thu Apr 14 17:45:12 2016 -0400
+++ b/pieplot_macs/pieplots_macs.py	Thu Apr 14 18:00:18 2016 -0400
@@ -40,28 +40,31 @@
         if words[0] == 'knownGeneID': continue
         chrom = words[2]
 
-
         if macsFlag:
-            print "MacsFlag off"
+            print "macsflag on"
             start = int(words[3])-1
             dist = abs(int(words[12]))
+            print dist
             maptype = words[14]
             if maptype == 'gene':
                 maptype = words[15]
 
         else:
-            print "macsFlag on"
+            print "macsflag off"
             try:
                 start = int(words[3])
                 dist = abs(int(words[15]))
+                print dist
                 maptype = words[16]
                 if maptype == 'gene':
                     maptype = words[17]
             except:
+                print 'trigger except'
                 pass
 
         print "dist:"
         print dist
+        print "that was dist"
 
         if chrom not in peaks:
             #new chrom