Mercurial > repos > althonos > gecco
annotate test-data/sideload.json @ 14:56b924f62165 draft
"Update tests files for Galaxy tool wrapper"
author | althonos |
---|---|
date | Tue, 05 Apr 2022 23:18:49 +0000 |
parents | d64fe390f3c9 |
children | cc91d730cc4f |
rev | line source |
---|---|
3
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
1 { |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
2 "records": [ |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
3 { |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
4 "name": "BGC0001866.1", |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
5 "subregions": [ |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
6 { |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
7 "details": { |
14 | 8 "alkaloid_probability": "0.010", |
9 "average_p": "0.996", | |
3
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
10 "max_p": "1.000", |
14 | 11 "nrp_probability": "0.140", |
12 "polyketide_probability": "0.960", | |
3
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
13 "ripp_probability": "0.000", |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
14 "saccharide_probability": "0.000", |
14 | 15 "terpene_probability": "0.010" |
3
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
16 }, |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
17 "end": 32979, |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
18 "label": "Polyketide", |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
19 "start": 347 |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
20 } |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
21 ] |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
22 } |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
23 ], |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
24 "tool": { |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
25 "configuration": { |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
26 "cds": "3", |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
27 "e-filter": "None", |
14 | 28 "edge-distance": "0", |
29 "mask": "False", | |
3
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
30 "postproc": "'gecco'", |
14 | 31 "threshold": "0.8" |
3
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
32 }, |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
33 "description": "Biosynthetic Gene Cluster prediction with Conditional Random Fields.", |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
34 "name": "GECCO", |
14 | 35 "version": "0.9.1" |
3
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
36 } |
359232b58f6a
"Update Galaxy tool wrapper to follow the IUC best practices"
althonos
parents:
diff
changeset
|
37 } |