Mercurial > repos > althonos > gecco

comparison CHANGELOG.md @ 5:169849dfb098 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"Release v0.8.6"
author althonos
date Thu, 17 Feb 2022 14:38:28 +0000
parents 359232b58f6a
children f8878bdf1e05
comparison
equal deleted inserted replaced
4:88dc16b4f583 5:169849dfb098
3 3
4 The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/) 4 The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/)
5 and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.html). 5 and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.html).
6 6
7 ## [Unreleased] 7 ## [Unreleased]
8 [Unreleased]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.5...master 8 [Unreleased]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.6...master
9
10 ## [v0.8.6] - 2022-02-17
11 [v0.8.6]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.5...v0.8.6
12 ### Added
13 - CLI flag for enabling region masking for contigs processed by Prodigal.
14 - CLI flag for controlling region distance used for edge distance filtering.
15 ### Changed
16 - `gecco.model.Gene` and `gecco.model.Protein` are now immutable data classes.
17 - Bump minimum `pyrodigal` version to `v0.6.4` to use region masking.
18 - Implement filtering for extracted clusters based on distance to the contig edge.
19 - Store InterPro metadata file uncompressed for version-control integration.
20 ### Fixed
21 - Mark `BGC0000930` as `Terpene` in the type classifier data.
22 - Progress bar messages are now in consistent format.
9 23
10 ## [v0.8.5] - 2021-11-21 24 ## [v0.8.5] - 2021-11-21
11 [v0.8.5]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.4...v0.8.5 25 [v0.8.5]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.4...v0.8.5
12 ### Added 26 ### Added
13 - Minimal compatibility support for running GECCO inside of Galaxy workflows. 27 - Minimal compatibility support for running GECCO inside of Galaxy workflows.