Mercurial > repos > amadeo > amadeo
changeset 5:fe377efdd4cc draft default tip
Uploaded
| author | amadeo |
|---|---|
| date | Mon, 05 Sep 2016 06:02:27 -0400 |
| parents | 838743a8fa68 |
| children | |
| files | tool_conf.xml.sample |
| diffstat | 1 files changed, 28 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_conf.xml.sample Mon Sep 05 06:02:27 2016 -0400 @@ -0,0 +1,28 @@ +<?xml version="1.0" encoding="utf-8"?> +<toolbox monitor="true">d + <section id="CREF" name="CREF"> + <tool file="CREF/short-headers.xml"/> + <tool file="CREF/extract_motifs_codes.xml"/> + <tool file="CREF/list_motifs.xml"/> + <tool file="CREF/extract_motifs_subset.xml"/> + </section> + <section id="First_version" name="Remove same overlapped motifs v.1.0"> + <tool file="First_version/sorting_first.xml"/> + <tool file="First_version/remove_motifs_overlaped.xml"/> + </section> + <section id="Second" name="Remove same and differents overlapped motifs v.2.0"> + <tool file="Second/remove_motifs_v2.xml"/> + <tool file="Second/step1.xml"/> + <tool file="Second/step2.xml"/> + </section> + <section id="Matrix" name="Gene-motif matrix"> + <tool file="Matrix/matrix_generator.xml"/> + </section> + <section id="Motif_search" name="CREF results analysis"> + <tool file="Motif_search/motif_search_galaxy.xml"/> + <tool file="Motif_search/sort_genes_galaxy.xml"/> + <tool file="Motif_search/sort_positions_galaxy.xml"/> + <tool file="Motif_search/rules.xml"/> + <tool file="Motif_search/testrules_galaxy.xml"/> + </section> +</toolbox> \ No newline at end of file