# HG changeset patch
# User anmoljh
# Date 1440758747 14400
# Node ID 5587e12bd07549bbeeae9f5f26e53e654d998a45
# Parent  96a9a03f8948b3c3150f7f51c6164abcf1a799d7
Uploaded

diff -r 96a9a03f8948 -r 5587e12bd075 align_and_estimate_abundance.xml
--- a/align_and_estimate_abundance.xml	Thu Aug 27 12:41:35 2015 -0400
+++ b/align_and_estimate_abundance.xml	Fri Aug 28 06:45:47 2015 -0400
@@ -5,6 +5,7 @@
 <requirements>
 	<requirement type="package" version="r20140717">trinityrnaseq</requirement>
 	<requirement type="package" version="0.12.7">bowtie</requirement>
+	<requirement type="package" version="2.2.5">bowtie2</requirement>
 	<requirement type="package" version="1.2">samtools</requirement>
 	<requirement type="package" version="1.5.1">eXpress</requirement>
 </requirements>
diff -r 96a9a03f8948 -r 5587e12bd075 tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Aug 27 12:41:35 2015 -0400
+++ b/tool_dependencies.xml	Fri Aug 28 06:45:47 2015 -0400
@@ -6,6 +6,9 @@
     <package name="bowtie" version="0.12.7"> 
 	<repository changeset_revision="9f9f38617a98" name="package_bowtie_0_12_7" prior_installation_required="True" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />	
     </package>
+    <package name="bowtie2" version="2.2.5">
+	<repository changeset_revision="8b300d21e6bd" name="package_bowtie_2_2_5" prior_installation_required="True" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" />
+    </package>	
     <package name="samtools" version="1.2">
 	<repository changeset_revision="f6ae3ba3f3c1" name="package_samtools_1_2" prior_installation_required="True" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" />
     </package>