Mercurial > repos > anmoljh > redundant_entries_remove

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author anmoljh
date Sun, 03 Jun 2018 03:42:10 -0400
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1 <tool id="remove_reduandant_entries" name="Remove Redundancy" version="1.0">
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2 <description>removes redundant entires of molecules</description>
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3 <requirements>
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4 <requirement type="package" version="3.2.1">R</requirement>
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5 </requirements>
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6 <stdio>
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7 <exit_code range="1:" />
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8 </stdio>
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9 <command interpreter="Rscript">remove_redundant_entries.R $Input1 $Non_redudant_mega_file</command>
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10 <inputs>
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11 <param format="txt" name="Input1" type="data" label="Merged Descriptor File" help="csv format"/>
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12 </inputs>
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13 <outputs>
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14 <data format="csv" name="Non_redudant_mega_file" label="Non-redundant Mega Descriptor File"/>
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15 </outputs>
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16 <tests>
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17 <test>
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18 <param name="Input1" value="merged.csv" />
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19 <output name="Non_redudant_mega_file" file="non_redundant.csv" compare="sim_size" delta="9000000" />
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20 </test>
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21 </tests>
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22
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23 <help>
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24 run command with Descriptor file and in csv format only .output file will be in CSV format.
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25 </help>
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26 </tool>