Mercurial > repos > anmoljh > trinitystats
annotate trinityStats.xml @ 4:bc69ce5c2914
changed tool dependency to trinity package version 20140717
| author | anmoljh <anmol.jh@gmail.com> |
|---|---|
| date | Wed, 26 Aug 2015 15:13:00 +0100 |
| parents | 0a8d55375004 |
| children | 8c77dcef9e1f |
| rev | line source |
|---|---|
| 0 | 1 <tool id='id_trinity_stats' name='Trinity Stats' version='1.0'> |
| 2 <description></description> | |
| 3 | |
| 4 <requirements> | |
| 5 <requirement type="package" version="2013_08_14">trinityrnaseq</requirement> | |
| 6 </requirements> | |
| 7 | |
|
3
0a8d55375004
corrected error in path
'Anmol J. Hemrom' <anmol.jh@gmail.com>
parents:
2
diff
changeset
|
8 <command>\$TRINITY_HOME/util/TrinityStats.pl $fastafile > $statsfile 2>&1;</command> |
| 0 | 9 |
| 10 <inputs> | |
| 11 <!-- Required --> | |
| 12 | |
|
2
6b715301b126
corrected missing path
'Anmol J. Hemrom' <anmol.jh@gmail.com>
parents:
0
diff
changeset
|
13 <param name='fastafile' type="data" format="fasta" label='Trinity Assembly' help='Trinity Assembled fasta file'/> |
| 0 | 14 |
| 15 <!-- Optional --> | |
| 16 | |
| 17 </inputs> | |
| 18 | |
| 19 <outputs> | |
| 20 <data name='statsfile' format='tabular' label="${tool.name} on ${on_string}: "/> | |
| 21 </outputs> | |
| 22 </tool> |