Mercurial > repos > anmoljh > trinitystats
comparison trinityStats.xml @ 2:6b715301b126
corrected missing path
| author | 'Anmol J. Hemrom' <anmol.jh@gmail.com> |
|---|---|
| date | Wed, 26 Aug 2015 13:52:39 +0100 |
| parents | 45e1df92fcda |
| children | 0a8d55375004 |
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| 1:d6df915e5f26 | 2:6b715301b126 |
|---|---|
| 3 | 3 |
| 4 <requirements> | 4 <requirements> |
| 5 <requirement type="package" version="2013_08_14">trinityrnaseq</requirement> | 5 <requirement type="package" version="2013_08_14">trinityrnaseq</requirement> |
| 6 </requirements> | 6 </requirements> |
| 7 | 7 |
| 8 <command interpreter='perl'>TrinityStats.pl $fastafile > $statsfile 2>&1;</command> | 8 <command interpreter='perl'>\$TRINITY_HOME/util/TrinityStats.pl $fastafile > $statsfile 2>&1;</command> |
| 9 | 9 |
| 10 <inputs> | 10 <inputs> |
| 11 <!-- Required --> | 11 <!-- Required --> |
| 12 | 12 |
| 13 <param name='fastafile' type="data" format="fasta" label='fastafile' help='Assembled fasta file'/> | 13 <param name='fastafile' type="data" format="fasta" label='Trinity Assembly' help='Trinity Assembled fasta file'/> |
| 14 | 14 |
| 15 <!-- Optional --> | 15 <!-- Optional --> |
| 16 | 16 |
| 17 </inputs> | 17 </inputs> |
| 18 | 18 |