Mercurial > repos > anmoljh > trinitystats
changeset 0:45e1df92fcda
Uploaded
author | anmoljh |
---|---|
date | Thu, 09 Jul 2015 11:19:45 -0400 |
parents | |
children | d6df915e5f26 |
files | trinityStats.xml |
diffstat | 1 files changed, 22 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/trinityStats.xml Thu Jul 09 11:19:45 2015 -0400 @@ -0,0 +1,22 @@ +<tool id='id_trinity_stats' name='Trinity Stats' version='1.0'> + <description></description> + + <requirements> + <requirement type="package" version="2013_08_14">trinityrnaseq</requirement> + </requirements> + + <command interpreter='perl'>TrinityStats.pl $fastafile > $statsfile 2>&1;</command> + + <inputs> + <!-- Required --> + + <param name='fastafile' type="data" format="fasta" label='fastafile' help='Assembled fasta file'/> + + <!-- Optional --> + + </inputs> + + <outputs> + <data name='statsfile' format='tabular' label="${tool.name} on ${on_string}: "/> + </outputs> +</tool>