Mercurial > repos > anmoljh > trinitystats
changeset 2:6b715301b126
corrected missing path
author | 'Anmol J. Hemrom' <anmol.jh@gmail.com> |
---|---|
date | Wed, 26 Aug 2015 13:52:39 +0100 |
parents | d6df915e5f26 |
children | 0a8d55375004 |
files | trinityStats.xml |
diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/trinityStats.xml Thu Jul 09 11:22:44 2015 -0400 +++ b/trinityStats.xml Wed Aug 26 13:52:39 2015 +0100 @@ -5,12 +5,12 @@ <requirement type="package" version="2013_08_14">trinityrnaseq</requirement> </requirements> - <command interpreter='perl'>TrinityStats.pl $fastafile > $statsfile 2>&1;</command> + <command interpreter='perl'>\$TRINITY_HOME/util/TrinityStats.pl $fastafile > $statsfile 2>&1;</command> <inputs> <!-- Required --> - <param name='fastafile' type="data" format="fasta" label='fastafile' help='Assembled fasta file'/> + <param name='fastafile' type="data" format="fasta" label='Trinity Assembly' help='Trinity Assembled fasta file'/> <!-- Optional -->