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comparison vcf2tsv.xml @ 1:1258fa7a2744

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Updated to vcflib 86723982aa
author Anton Nekrutenko <anton@bx.psu.edu>
date Wed, 25 Jun 2014 15:57:09 -0400
parents 8e1a693e7a52
children fc3c4fc09e28
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0:8e1a693e7a52 1:1258fa7a2744
1 <tool id="vcf2tsv" name="VCFtoTab-delimited:" version="0.0.1"> 1 <tool id="vcf2tsv" name="VCFtoTab-delimited:" version="0.0.1">
2 <requirements> 2 <requirements>
3 <requirement type="package" version="586c5ae5d57a38dae6b32ea831fb1f7cfa14c9bd">vcflib</requirement> 3 <requirement type="package" version="86723982aa">vcflib</requirement>
4 </requirements> 4 </requirements>
5 <description>Convert VCF data into TAB-delimited format</description> 5 <description>Convert VCF data into TAB-delimited format</description>
6 <command>vcf2tsv ${g_option} -n "${null_filler}" "${input}" > "${out_file1}"</command> 6 <command>vcf2tsv ${g_option} -n "${null_filler}" "${input}" > "${out_file1}"</command>
7 <inputs> 7 <inputs>
8 <param format="vcf" name="input" type="data" label="Select VCF dataset to convert"/> 8 <param format="vcf" name="input" type="data" label="Select VCF dataset to convert"/>