changeset 3:9baa80088ab6 draft default tip

Uploaded

--- a/tool_dependencies.xml	Wed Jun 25 16:34:51 2014 -0400
+++ b/tool_dependencies.xml	Mon Sep 15 14:48:52 2014 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
-  <package name="vcflib" version="86723982aa">
-      <repository changeset_revision="a6826babf644" name="vcflib_86723982aa" owner="anton" toolshed="https://toolshed.g2.bx.psu.edu" />
+    <package name="vcflib" version="8a5602bf07">
+        <repository changeset_revision="bffe0495cd92" name="package_vcflib_8a5602bf07" owner="anton" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>

--- a/vcfannotategenotypes.xml	Wed Jun 25 16:34:51 2014 -0400
+++ b/vcfannotategenotypes.xml	Mon Sep 15 14:48:52 2014 -0400
@@ -1,6 +1,6 @@
 <tool id="vcfannotategenotypes" name="VCFannotateGenotypes:" version="0.0.2">
 <requirements>
-    <requirement type="package" version="86723982aa">vcflib</requirement>
+    <requirement type="package" version="8a5602bf07">vcflib</requirement>
 </requirements>
   <description>Annotate genotypes in a VCF dataset using genotypes from another VCF dataset</description>
   <command>vcfannotategenotypes "${tag_option}" "${input1}" "${input2}" > "${out_file1}"</command>
@@ -22,7 +22,7 @@
     </tests>
 <help>
 
-Annotates genotypes in the **First** file with genotypes in the **Second** adding the genotype as another flag to each sample filed in the first file. **Annotation-tag** is the name of the sample flag which is added to store the annotation.  also adds a 'has\_variant' flag for sites where the second file has a variant.
+Annotates genotypes in the **First** dataset with genotypes from the **Second** adding the genotype as another flag to each sample filled in the first file. **Annotation-tag** is the name of the sample flag which is added to store the annotation.  Also adds a 'has\_variant' flag for sites where the second file has a variant.
 
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