Mercurial > repos > artbio > blast_to_scaffold
comparison blast_to_scaffold.xml @ 1:be61d0d0d622 draft
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/blast_to_scaffold commit 3dcf4e7314dd6a4fefcd721ac58c8130dd1da2a1"
| author | artbio |
|---|---|
| date | Wed, 10 Mar 2021 19:09:31 +0000 |
| parents | 7d96b28eec49 |
| children | 3041f611636f |
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| 0:7d96b28eec49 | 1:be61d0d0d622 |
|---|---|
| 1 <tool id="blast2scaffold" name="blast_to_scaffold" version="1.0.0"> | 1 <tool id="blast2scaffold" name="blast_to_scaffold" version="1.1.0"> |
| 2 <description>Generate DNA scaffold from blastn or tblastx alignment of Contigs</description> | 2 <description>Generate DNA scaffold from blastn or tblastx alignment of Contigs</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="3.7.6">python</requirement> | |
| 4 </requirements> | 5 </requirements> |
| 5 <command interpreter="python"> | 6 <command interpreter="python"> |
| 6 blast_to_scaffold.py --sequences "$sequences" | 7 blast_to_scaffold.py --sequences "$sequences" |
| 7 --guideSequence "$guideSequence" | 8 --guideSequence "$guideSequence" |
| 8 --blast-tab "$blast_tab" | 9 --blast-tab "$blast_tab" |