Mercurial > repos > artbio > cap3
comparison test-data/input.fa @ 0:d76a0d8a9eac draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cap3 commit 9d6ba79f91bdf48dc01c09c088c63f5ea60d137a
author | artbio |
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date | Sat, 02 Sep 2017 07:09:11 -0400 |
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children |
comparison
equal
deleted
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-1:000000000000 | 0:d76a0d8a9eac |
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1 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_4/7_Confidence_0.286_Length_409_hit1_IdMatch=96.58,AligLength=409,E-val=0.0 | |
2 TTAATGAGCTCAGGTTGGGTTTTTACAATCTCCCGTCTCAAAGCTGACGTTCTGGCTGCA | |
3 GTAGTCTTATCAATCAGATTACGCTTTTCCTCCATTTCTTCTCTTTGACTGTCCTGCAAT | |
4 GTGGGGAAAGGAGTCACTAGTGGGTATAAGGAAATCAAGTCTCCAAGTTCATCTCCAGTA | |
5 GTGAAATAGCCCCCTTTAGCAGCACCCACAACAATTTGGTAGGCACTAGCTCCAACTTTA | |
6 TCGGCAACAGTACCAACCTGAGAAACACCTCCAACTGAGGTAAGCCATCTAACGACGGCT | |
7 TGAGCCATATTTGGTAGGAATTTCTCAGGGATGTCACCACTTTCTGTGATCCGAACTACT | |
8 TTGGGTCTGGGGTTCGGTTCTGAATACTGGACTTGCTGAGGTTTAAGAG | |
9 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_3/7_Confidence_0.286_Length_395_hit1_IdMatch=97.97,AligLength=395,E-val=0.0 | |
10 GTTGCATATTCAACCTGCCGAGCCCAGGAAGACTCAGGCGGGGGAGGCACTACATTAGGG | |
11 GTCGCAAAGCTAGACTTCTTGTATGGGATGTTGTTAACCTCCAAAATAGCTGCACAGATG | |
12 TATTCCTTAGCCAGTTTGGCAGAGGAAGACCAGGCTTCTCCCAACAGCTTCACATCCTGG | |
13 GTATGGTGGCTGTGGGCGTAGAGCCTAACTCCAACAGGATTGGCAGCATTTGGCCGTACC | |
14 TCAGATATCCATTTAGTGAATCCTGAGAATCTCCCGCTGACCATTGCATGGACATATGCC | |
15 ATGGCATCCTCTGCTGTATTTATATCGTGGGGAGGTGGATGGAGGTTCGATACTCCTGCA | |
16 ACGTCCAGGTTAATGAGCTCAGGTTGGGTTTTTAC | |
17 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_29_Transcript_1/1_Confidence_0.000_Length_607_hit1_IdMatch=97.7,AligLength=608,E-val=0.0 | |
18 ACGCCCGAGAGCGTGGTCTTGGGCATGGCACTGTAGGCGACCTGACTCCCAGACTTTCGA | |
19 GGGCGATTTCGCCCTCTTCGACGGGGTCCTTGAACCATTGAGCAATTCTTTCCCACAATT | |
20 TGACGAGAAGATACACTCTGTACGGTAACCTTGGGGGAACGACGGTTTCTGGTGGAAAGA | |
21 TTGTTTCCACTGTTGTTTGATATGCGCTTTGTAGTTGTGACGATGGTGGCCATGGCATAA | |
22 TATTTACAAATTGTATTCTTGATTTGAGTTTGGGTTGTTTGATGTTATAGGGTCGGCAAG | |
23 AGCTTACTTGCAGTTCTCTTCCTCTTTTTGCGGTCGAGAGTCTTTTTGTTGAGTCTCGTC | |
24 CTTTGTTCTGCGGTCAGCAGTGATCTCTTCGATGCTACTTTAGGAGGTGGAAACCGGGAG | |
25 AATAAGTCTTGAATTCTCACACGGTAGTCATCAGGATTTTTATGACTAACCTCTCTAATA | |
26 AGCATCTGCACCTGGCGGGGACAGTGCCCCGGGAATTGCTGCATTATACTGTGAAACAGC | |
27 TCCAAATCCAGGGTTTCATGAACGGGCACAATCTGTGGCACAGCTTTAGGGGCAGTTGCA | |
28 TATTCAA | |
29 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_11_Transcript_1/2_Confidence_0.667_Length_236_hit1_IdMatch=98.73,AligLength=236,E-val=2e-113 | |
30 ATAGAAGCACTGTGAATCAGGTTTACGCGAAGATGGTGAGGAGAAAACGGCAAGATCTTG | |
31 CCTATCTCCAGGAGTTGGTGAGGACAGCCCATCGAGAGATTCTCCCCCAAGGAGAACTTC | |
32 TCCATGAGTCGGAAGCCAAACAGTATGTAGCCGAATATAAGGCTCGACTACCTGTGGTTG | |
33 ACACTAAGAAAGTTGGCGAACTGCCAACTGAGGTCTTCCAGGTAGCACTCCCAAGT | |
34 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_27_Transcript_1/1_Confidence_0.000_Length_471_hit1_IdMatch=97.66,AligLength=471,E-val=0.0 | |
35 GCAAAAAGAATGCCTCTGATAGGGCAATCATAAAACTGTTAAACAAATACATGCCTAGGA | |
36 CAGGAAATAAGAACTGGCCTGGTGTCCATACAACCCCGGAAGAAGGCATACTTGATGGTA | |
37 TTAAGATAACGGCCAAATCCAGTGCAGGCGCTCCCTATTGGAGACACAAGGGGGAATGCC | |
38 TAGACCATATAATTGATACTGGACTTCCTGTTGTGCTAAAGCATATAAAGGAAGGAACCC | |
39 TCAATCAGTTGTGGCGGGAAAACCCTGAGATGTTCCTCGTTGAAGTTAAGAACAAACTTG | |
40 ATAGATACGAGGTTTCGAAGCTTAAAGAGAAGACTAGACCCTATGTGTGTGTACCTGCGC | |
41 ACTGGGCTCTCCTATTCTCGTGCTTGACTCAAGGATTCCAAGAAGGACTTCAAGTTTTTA | |
42 GTAACTTGGACCCCAGTACAGAATGCTCGAATGCATATGGATTTTCATCCA | |
43 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_2/7_Confidence_0.143_Length_224_hit1_IdMatch=97.77,AligLength=224,E-val=3e-104 | |
44 ACATCCTGGGTATGGTGGCTGTGGGCGTAGAGCCTAACTCCAACAGGATTGGCAGCATTT | |
45 GGCCGTACCTCAGATATCCATTTAGTGAATCCTGAGAATCTCCCGCTGACCATTGCATGG | |
46 ACATATGCCATGGCATCCTCTGCTGTATTTATATCGTGGGGAGGTGGATGGAGGTTCGAT | |
47 ACTCCTGCAACGTCCAGGTTAATGAGCTCAGGTTGGGTTTTTAC | |
48 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_21_Transcript_2/2_Confidence_0.333_Length_515_hit1_IdMatch=97.28,AligLength=515,E-val=0.0 | |
49 TGGATTTTCATCCATTGCTGGAGGGCTTACTAGGATGGTCGACTGGATGTATGCCTGCCC | |
50 AAAGCGGCGGGGACGGGTTGTCTGTTACGGTGACGATGCATGTATAACATTTTGGAGCCA | |
51 GGGCGTCCTCTATCGGGTGGATCCAGATTTTAAACAAATGGACGGGTCCATAGATAGAGA | |
52 GGATGCAAGAATCACCATTGAGTGGGTCCTCCACCATCTCAGAAAGGATTTAGGTGTAGA | |
53 GGAGACCCCTGCTTTTTGGAAGACAGTTGCAGCAGTGTGGCTTGATATGGCCATTGACCC | |
54 CCACTTTATCGTGGATGGTAAAACTGTTTACAAGAAGAAGAACCCCCATGGACTCATGAC | |
55 TGGAGTTCCAGGAACAACCCTATTTGACACTGTGAAATCTGTAATAGTCTGGAATGAAAT | |
56 GTTGGATCAGGCTGGTGCAGGTTCCATAGACCTTTTAAATGAAGCTCAAGTAGTTGAATG | |
57 GATGAAGAGACAAGGCTTGGTTGTCAAAGAGGGAA | |
58 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_14_Transcript_1/1_Confidence_0.000_Length_210_hit1_IdMatch=98.1,AligLength=210,E-val=3e-98 | |
59 TGTCCCGTTGCACCCCCCATCCATTAACAATCGGGGTGGGCATACTCATGTCACTCGCCA | |
60 GATGGGCGGAGTACCTCACCCTCCTCTTGGTCTAATACCCATAGCTCAGAAGTACGGGGT | |
61 AGAGATCTTGGACCAGAAACATGTCTACACAGGAGGCACTTGGGATGGCTTTCTTAATAG | |
62 ACTCGCCCAACAGATGGGCCGGACAACGGT | |
63 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_1/7_Confidence_0.286_Length_199_hit1_IdMatch=98.48,AligLength=197,E-val=2e-92 | |
64 GTTGCATATTCAACCTGCCGAGCCCAGGAAGACTCAGGCGGGGGAGGCACTACATTAGGG | |
65 GTCGCAAAGCTAGACTTCTTGTATGGGATGTTGTTAACCTCCAAAATAGCTGCACAGATG | |
66 TATTCCTTAGCCAGTTTGGCAGAGGAAGACCAGGCTTCTCCCAACAGCTTCACATCCTGG | |
67 GTATGGTGGCTGTGGGC | |
68 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_21_Transcript_1/2_Confidence_0.667_Length_506_hit1_IdMatch=97.04,AligLength=506,E-val=0.0 | |
69 TGGATTTTCATCCATTGCTGGAGGGCTTACTAGGATGGTCGACTGGATGTATGCCTGCCC | |
70 AAAGCGGCGGGGACGGGTTGTCTGTTACGGTGACGATGCATGTATAACATTTTGGAGCCA | |
71 GGGCGTCCTCTATCGGGTGGATCCAGATTTTAAACAAATGGACGGGTCCATAGATAGAGA | |
72 GGATGCAAGAATCACCATTGAGTGGGTCCTCCACCATCTCAGAAAGGATTTAGGTGTAGA | |
73 GGAGACCCCTGCTTTTTGGAAGACAGTTGCAGCAGTGTGGCTTGATATGGCCATTGACCC | |
74 CCACTTTATCGTGGATGGTAAAACTGTTTACAAGAAGAAGAACCCCCATGGACTCATGAC | |
75 TGGAGTTCCAGGAACAACCCTATTTGACACTGTGAAATCTGTAATAGTCTGGAATGAAAT | |
76 GTTGGATCAGGCTGGTGCAGGTTCCATAGACCTTTTAAATGAAGCTCAAGTAGTTGAATG | |
77 GATGAAGAGACAAGGCTTAGTTGTCA | |
78 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_11_Transcript_2/2_Confidence_0.000_Length_284_hit1_IdMatch=98.94,AligLength=284,E-val=2e-139 | |
79 AACGTAAAACAAACGACATGGATGCATCTAACCCTATTATTTCAAGCGATAGAAGCACTG | |
80 TGAATCAGGTTTATGCGAAGATGGTGAGGAGAAAACGGCAAGATCTTGCCTATCTCCAGG | |
81 AGTTGGTGAGGACAGCCCATCGAGAGATTCTCCCCCAAGGAGAACTTCTCCATGAGTCGG | |
82 AAGCCAAACAGTATGTAGCCGAATATAAGGCTCGACTACCTGTGGTTGACACTAAGAAAG | |
83 TTGGCGAACTGCCAACTGAGGTCTTCCAGGTAGCACTCCCAAGT | |
84 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_9_Transcript_2/2_Confidence_0.333_Length_251_hit1_IdMatch=98.0,AligLength=250,E-val=3e-118 | |
85 TGGTGCCCCTAAGAGAATCGAACTCAAACTCTCCAGTTGTGTAGTAACCAGAGAGCCACC | |
86 GAGGAGGGACGGGGTGGTGATTATGAAAAGATGATGGGTTTTGGGGAGAGGTTATACAAT | |
87 TTCAAAATCTTGAACGGCCACTGGGTCTTCAGATATCACTTTGAAAGGACTGAGTGTCGT | |
88 TCCATCAGGCATACCCTCAAGTTTGGTCCTAATCTTAGCTGTGTCCTTGCTGAGAGCAAC | |
89 AGTTCTTGTTA | |
90 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_7/7_Confidence_0.000_Length_627_hit1_IdMatch=97.93,AligLength=627,E-val=0.0 | |
91 GTTCTGAATACTGGACTTGCTGAGGTCTAAGAGCCTCAAACACTTTGTACTCATCATTCA | |
92 GATTCGCCTCAGGAGGAGGAGGGCATCCTACAACCTCCTTGACATCATAGTCGTTGGATT | |
93 GGACTGTCAAATTTATCTGCCTCACAGCCACTCTCTGCTCCCTCTTAAACTCGTCCAGGA | |
94 ATCCTGACAATGTGGGGAACAGATTAATCCATCCCGCTTTGTCATCCTCTCCATCTGAAT | |
95 AGAGGTCTAGACAGAAGTCCCGAGAGGGGAATCCTGACGAATCTGGATATTCAAAGTCCT | |
96 GGAGGGTTATATGTTCTGGCTTCGTTCCGGTTTGCTCTTGCGTTTGCATGACAATAATCT | |
97 CGCCGGGGATTGTGTTAACCACAGCGTGTATTGTCTCTTCGATCCGAGGTATGCTGAATC | |
98 CCATTGTTATCATTAAACCCCTCATACGGTCATACAGAGTTCTTTGGCGTGCCGTTCTAG | |
99 ATACTGCCTTTTCAAAGGGATTATCCTTCTGGCAGAGCATCATCTCAAGAGCATCGCTCT | |
100 CAGGCATTGTGGGGACATGTATCACACGGTGTCTGTGGTACACTCCCATAATTTGTACGC | |
101 CAAGAAATTTGTGGTCCGTAATTAGAC | |
102 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_24_Transcript_1/1_Confidence_0.000_Length_280_hit1_IdMatch=96.79,AligLength=280,E-val=4e-129 | |
103 ACCATTTGTCCCCCATGGTGCATTTTCATGGTAAGGTAGTCACTGTTCCAGGAACCATCT | |
104 GAGGTGGTAAAAAGGTCCTGGAAACCAGTATCTGGAGTGATATCCTCGTCAATGGAGACA | |
105 GCTCCTAATTCAGCACCTTCAAACTCAATCACCCATTCGAGTGTGACAGTGAAGGTGGTG | |
106 CTTCCTGTGTATCCACCGGTGGTAGAGGCAACAACCACATTGATGAAGCCATGATTGGCG | |
107 TCATCAGGGTTGCCTTTGGTGAGATACCACTTACGGGTGG | |
108 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_6/7_Confidence_0.143_Length_1372_hit1_IdMatch=97.59,AligLength=1372,E-val=0.0 | |
109 GTTGCATATTCAACCTGCCGAGCCCAGGAAGACTCAGGCGGGGGAGGCACTACATTAGGG | |
110 GTCGCAAAGCTAGACTTCTTGTATGGGATGTTGTTAACCTCCAAAATAGCTGCACAGATG | |
111 TATTCCTTAGCCAGTTTGGCAGAGGAAGACCAGGCTTCTCCCAACAGCTTCACATCCTGG | |
112 GTATGGTGGCTGTGGGCGTAGAGCCTAACTCCAACAGGATTGGCAGCATTTGGCCGTACC | |
113 TCAGATATCCATTTAGTGAATCCTGAGAATCTCCCGCTGACCATTGCATGGACATATGCC | |
114 ATGGCATCCTCTGCTGTATTTATATCGTGGGGAGGTGGATGGAGGTTCGATACTCCTGCA | |
115 ACGTCCAGGTTAATGAGCTCAGGTTGGGTTTTTACAATCTCCCGTCTCAAAGCTGACGTT | |
116 CTGGCTGCAGTAGTCTTATCAATCAGATTACGCTTTTCCTCCATTTCTTCTCTTTGACTG | |
117 TCCTGCAATGTGGGGAAAGGAGTCACTAGTGGGTATAAGGAAATCAAGTCTCCAAGTTCA | |
118 TCTCCAGTAGTGAAATAGCCCCCTTTAGCAGCACCCACAACAATTTGGTAGGCACTAGCT | |
119 CCAACTTTATCGGCAACAGTACCAACCTGAGAAACACCTCCAACTGAGGTAAGCCATCTA | |
120 ACGACGGCTTGAGCCATATTTGGTAGGAATTTCTCAGGGATGTCACCACTTTCTGTGATC | |
121 CGAACTACTTTGGGTCTGGGGTTCGGTTCTGAATACTGGACTTGCTGAGGTCTAAGAGCC | |
122 TCAAACACTTTGTACTCATCATTCAGATTCGCCTCAGGAGGAGGAGGGCATCCTACAACC | |
123 TCCTTGACATCATAGTCGTTGGATTGGACTGTCAAATTTATCTGCCTCACAGCCACTCTC | |
124 TGCTCCCTCTTAAACTCGTCCAGGAATCCTGACAATGTGGGGAACAGATTAATCCATCCC | |
125 GCTTTGTCATCCTCTCCATCTGAATAGAGGTCTAGACAGAAGTCCCGAGAGGGGAATCCT | |
126 GACGAATCTGGATATTCAAAGTCCTGGAGGGTTATATGTTCTGGCTTCGTTCCGGTTTGC | |
127 TCTTGCGTTTGCATGACAATAATCTCGCCGGGGATTGTGTTAACCACAGCGTGTATTGTC | |
128 TCTTCGATCCGAGGTATGCTGAATCCCATTGTTATCATTAAACCCCTCATACGGTCATAC | |
129 AGAGTTCTTTGGCGTGCCGTTCTAGATACTGCCTTTTCAAAGGGATTATCCTTCTGGCAG | |
130 AGCATCATCTCAAGAGCATCGCTCTCAGGCATTGTGGGGACATGTATCACACGGTGTCTG | |
131 TGGTACACTCCCATAATTTGTACGCCAAGAAATTTGTGGTCCGTAATTAGAC | |
132 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_22_Transcript_1/1_Confidence_0.000_Length_289_hit1_IdMatch=95.5,AligLength=289,E-val=1e-128 | |
133 GGCCTGCAGGCCATAACTCGGTTGAGGTTTTGAGTGTCATTGCCTGAGATATTGTTGGCG | |
134 GGGTCTGGAGACCATCCTATGGCAAGGGATCCAAAAGTATTTGCACTTCCAGATCCCACT | |
135 ACCAGCACTCGGAGTTTCTTGGGTCGCCAGCGGGAATATAGCTTACTCTGCTGCTGAAGC | |
136 CTAGAATCACTCATAGCCGTTGGACATATGGCTTGAGCAAAAAGGCTAGCTCCCACTGCG | |
137 CGCTGCGGTTGTACCTCAATAACGCCTATAATGTCCACGCCCGAGAGCG | |
138 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_5/7_Confidence_0.286_Length_421_hit1_IdMatch=96.67,AligLength=421,E-val=0.0 | |
139 TACTCCTGCAACGTCCAGATTAATGAGCTCAGGTTGGGTTTTTACAATCTCCCGTCTCAA | |
140 AGCTGACGTTCTGGCTGCAGTAGTCTTATCAATCAGATTACGCTTTTCCTCCATTTCTTC | |
141 TCTTTGACTGTCCTGCAATGTGGGGAAAGGAGTCACTAGTGGGTATAAGGAAATCAAGTC | |
142 TCCAAGTTCATCTCCAGTAGTGAAATAGCCCCCTTTAGCAGCACCCACAACAATTTGGTA | |
143 GGCACTAGCTCCAACTTTATCGGCAACAGTACCAACCTGAGAAACACCTCCAACTGAGGT | |
144 AAGCCATCTAACGACGGCTTGAGCCATATTTGGTAGGAATTTCTCAGGGATGTCACCACT | |
145 TTCTGTGATCCGAACTACTTTGGGTCTGGGGTTCGGTTCTGAATACTGGACTTGCTGAGG | |
146 T | |
147 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_9_Transcript_1/2_Confidence_0.667_Length_253_hit1_IdMatch=98.0,AligLength=250,E-val=3e-118 | |
148 TACGGTGCCCCTAAGAGAATCGAACTCAAACTCTCCAGTTGTGTAGTAACCAGAGAGCCA | |
149 CCGAGGAGGGACGGGGTGGTGATTATGAAAAGATGATGGGTTTTGGGGAGAGGTTATACA | |
150 ATTTCAAAATCTTGAACGGCCACTGGGTCTTCAGATATCACTTTGAAAGGACTGAGTGTC | |
151 GTTCCATCAGGCATACCCTCAAGTTTGGTCCTAATCTTAGCTGTGTCCTTGCTGAGAGCA | |
152 ACAGTTCTTGTTA | |
153 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_20_Transcript_1/1_Confidence_0.000_Length_352_hit1_IdMatch=98.01,AligLength=352,E-val=8e-171 | |
154 GCATTCACTGCTCTAAGTTGCTCGGTCAGCTGGTCAATGCGGCGAAGTAGATTAGTTTCG | |
155 ACAGTCTGAACTGCTTCATCAGCCACCCTAAATTTAGGGATGGGAGGGCTAATGACAGGA | |
156 CCTTGGGTGTAATACTTGAGACATTTGCCAGTATCTCCAGTGCGGATATAATCTTTTGCA | |
157 TCTGTGTAACTGGCAAACATAACAAAACCTGGGATAGAGTAACCTTGTATAACTGCAAAG | |
158 AAGTTTGCTGTCTTCAAGGTCGTCTTGTCCTCAAGGTAGTAGGTTACATTTGTCCCTGGT | |
159 GCATTTGTATACACATAAGCCTGGTGGGCAGCCGAAAAGGGGACCATTTGTC |