Mercurial > repos > artbio > cherry_pick_fasta
annotate test-data/input_withspace.fa @ 8:ee689b6999d5 draft default tip
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/cherry_pick_fasta commit 6cbabbaa6706494c530833f0fb0cbeebce4f150b
author | artbio |
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date | Wed, 11 Oct 2023 14:27:09 +0000 |
parents | d8fa616a228a |
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rev | line source |
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6
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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1 >FBtr0070292 type=snoRNA; loc=X:complement(1482492..1482590); ID=FBtr0070292; name=snoRNA:M-RA; dbxref=FlyBase:FBtr0070292,FlyBase_Annotation_IDs:CR32807-RA,REFSEQ:NR_002093,RNAcentral:URS00002398EB_7227; MD5=81314d41b5db15222ab4c0daca9e3a65; length=99; parent=FBgn0044508; release=r6.45; species=Dmel; |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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2 AATTCAATGATTTCAACTTCACTGCTGACCAGCCACGCCTCAACGCCTCGGAGTGTTTGC |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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3 CCCCAGTCTCTGATAGATACACCATATTCTAATACACAC |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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4 >FBtr0072259 type=snoRNA; loc=2R:24176228..24176367; ID=FBtr0072259; name=snoRNA:Psi18S-1820-RA; dbxref=FlyBase:FBtr0072259,FlyBase_Annotation_IDs:CR32884-RA,REFSEQ:NR_001911,RNAcentral:URS00004071FD_7227; MD5=a2f621766d8c1f39cb12a50f1c35d266; length=140; parent=FBgn0026169; release=r6.45; species=Dmel; |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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5 ACCCCATGATATTAAGCCGGCAGGTGCCTGCAATCCCCACGGGCACCTGTGACTATGATT |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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6 GGGAACAGCAAAGCTGCTGATGTGTGTATGTTGGGCAGCGCTCTTATCCTGCGCGCTCGA |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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7 CAAAGAATATTCGGTCGACA |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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8 >FBtr0076634 type=snoRNA; loc=3L:8601473..8601552; ID=FBtr0076634; name=snoRNA:U49:66Da-RA; dbxref=FlyBase:FBtr0076634,FlyBase_Annotation_IDs:CR32911-RA,REFSEQ:NR_001954,RNAcentral:URS000020066A_7227; MD5=9f94db9a46640f6af279661b83c98768; length=80; parent=FBgn0060292; release=r6.45; species=Dmel; |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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9 TGCACATGATGATAATTTGTCTTCTTGATAGGAAGTGCCAACTGACACATAAATGAAGCT |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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10 AGTTTAACCCTCTGAAAGCA |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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11 >FBtr0076635 type=snoRNA; loc=3L:8601948..8602031; ID=FBtr0076635; name=snoRNA:U49:66Db-RA; dbxref=FlyBase:FBtr0076635,FlyBase_Annotation_IDs:CR32910-RA,REFSEQ:NR_001955,RNAcentral:URS000008F83A_7227; MD5=b2175b964d1d7e4cbe00bd8e55b73ca8; length=84; parent=FBgn0060291; release=r6.45; species=Dmel; |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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12 CTGCACATGATGATAATTGAAAGTTCTTGATAGGAATTGCCGGCTGACACATATATGAAG |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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13 CTAATTCTAGTTTATCTGATTACA |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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14 >FBtr0077222 type=snoRNA; loc=X:complement(21386845..21386935); ID=FBtr0077222; name=snoRNA:MeU6-A47-RA; dbxref=FlyBase:FBtr0077222,FlyBase_Annotation_IDs:CR32519-RA,REFSEQ:NR_002137,RNAcentral:URS00005A5367_7227; MD5=77f36daf4093aa585511640befa5a75c; length=91; parent=FBgn0025882; release=r6.45; species=Dmel; |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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15 AGCCAATGATGATTAAACCACAAATGCAGGGAGTGGGCAGCTGGCAACAGTTGGCGCACG |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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16 CATGACCAGCAACTAATCTTCTCGCTGACGG |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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17 >FBtr0078576 type=snoRNA; loc=3L:complement(22869545..22869622); ID=FBtr0078576; name=snoRNA:Me28S-G764-RA; dbxref=FlyBase:FBtr0078576,FlyBase_Annotation_IDs:CR32907-RA,REFSEQ:NR_001980,RNAcentral:URS00004E3D30_7227; MD5=a9683fc8a27d695afdba8fa26613675a; length=78; parent=FBgn0020518; release=r6.45; species=Dmel; |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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18 ATATGATGTTAACAGCTTGTAATGATTATGCATTGTGATTATTCAAGTTTATTTTGTTTC |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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19 AAGACGGGACTGACTATA |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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20 >FBtr0086350 type=rRNA; loc=2R:complement(19764289..19764423); ID=FBtr0086350; name=5SrRNA:CR33358-RA; dbxref=FlyBase:FBtr0086350,FlyBase_Annotation_IDs:CR33358-RA,REFSEQ:NR_001887,RNAcentral:URS00003B4856_7227; MD5=dacf3866c94cfe27156e359c01e8f212; length=135; parent=FBgn0053358; release=r6.45; species=Dmel; |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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21 GCCAACGACCATACCACGCTGAATACATCGGTTCTCGTCCGATCACCGAAATTAAGCAGCGTCGGGCGCGGTTAGTACTT |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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22 AGATGGGGGACCGCTTGGGAACACCGCGTGTTGTTGGCCTCGTCCACAACTTTTT |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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23 >FBtr0086351 type=rRNA; loc=2R:complement(19763913..19764047); ID=FBtr0086351; name=5SrRNA:CR33359-RA; dbxref=FlyBase:FBtr0086351,FlyBase_Annotation_IDs:CR33359-RA,REFSEQ:NR_001886,RNAcentral:URS00003B4856_7227; MD5=dacf3866c94cfe27156e359c01e8f212; length=135; parent=FBgn0053359; release=r6.45; species=Dmel; |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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24 GCCAACGACCATACCACGCTGAATACATCGGTTCTCGTCCGATCACCGAAATTAAGCAGCGTCGGGCGCGGTTAGTACTT |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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25 AGATGGGGGACCGCTTGGGAACACCGCGTGTTGTTGGCCTCGTCCACAACTTTTT |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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26 >FBtr0086352 type=rRNA; loc=2R:complement(19763544..19763678); ID=FBtr0086352; name=5SrRNA:CR33360-RA; dbxref=FlyBase:FBtr0086352,FlyBase_Annotation_IDs:CR33360-RA,REFSEQ:NR_001885,RNAcentral:URS00003B4856_7227; MD5=dacf3866c94cfe27156e359c01e8f212; length=135; parent=FBgn0053360; release=r6.45; species=Dmel; |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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27 GCCAACGACCATACCACGCTGAATACATCGGTTCTCGTCCGATCACCGAAATTAAGCAGCGTCGGGCGCGGTTAGTACTT |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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28 AGATGGGGGACCGCTTGGGAACACCGCGTGTTGTTGGCCTCGTCCACAACTTTTT |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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29 >FBtr0086353 type=rRNA; loc=2R:complement(19763175..19763309); ID=FBtr0086353; name=5SrRNA:CR33361-RA; dbxref=FlyBase:FBtr0086353,FlyBase_Annotation_IDs:CR33361-RA,REFSEQ:NR_001884,RNAcentral:URS00005F0FA0_7227; MD5=9162f14f3b33b2210e2100cada0b7f92; length=135; parent=FBgn0053361; release=r6.45; species=Dmel; |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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30 GCCAACGACCATACCACGCTGAATACATCGGTTCTCGTCCGATCACCGAAATTAAGCAGCGTCGGGCGCGGTTAGTACTT |
d8fa616a228a
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 8384f1bb5378232bbe78319e06a3522674c7c1fe"
artbio
parents:
diff
changeset
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31 AGATGAGGGACCGCTTGGGAACACCGCGTGTTGTTGGCCTCGTCCACAACTTTTT |