Mercurial > repos > artbio > gatk4
annotate test-data/filtered_Mutect2-out1_stats.tsv @ 1:b040adcfeefd draft
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit f2a0b974cb707179f090dec550d219ff3cb1af29"
author | artbio |
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date | Tue, 04 Jan 2022 15:10:59 +0000 |
parents | c51c08cc9fcc |
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rev | line source |
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c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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1 #<METADATA>Ln prior of deletion of length 10=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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2 #<METADATA>Ln prior of deletion of length 9=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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3 #<METADATA>Ln prior of deletion of length 8=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
4 #<METADATA>Ln prior of deletion of length 7=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
5 #<METADATA>Ln prior of deletion of length 6=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
6 #<METADATA>Ln prior of deletion of length 5=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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7 #<METADATA>Ln prior of deletion of length 4=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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8 #<METADATA>Ln prior of deletion of length 3=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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9 #<METADATA>Ln prior of deletion of length 2=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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10 #<METADATA>Ln prior of deletion of length 1=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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11 #<METADATA>Ln prior of SNV=-18.420680743952367 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
12 #<METADATA>Ln prior of insertion of length 1=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
13 #<METADATA>Ln prior of insertion of length 2=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
14 #<METADATA>Ln prior of insertion of length 3=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
15 #<METADATA>Ln prior of insertion of length 4=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
16 #<METADATA>Ln prior of insertion of length 5=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
17 #<METADATA>Ln prior of insertion of length 6=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
18 #<METADATA>Ln prior of insertion of length 7=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
19 #<METADATA>Ln prior of insertion of length 8=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
|
20 #<METADATA>Ln prior of insertion of length 9=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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21 #<METADATA>Ln prior of insertion of length 10=-20.72326583694641 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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22 #<METADATA>Background beta-binomial cluster=weight = 0.5000, alpha = 1.00, beta = 1.00 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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23 #<METADATA>High-AF beta-binomial cluster=weight = 0.5000, alpha = 10.00, beta = 1.00 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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24 #<METADATA>threshold=1.0 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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25 #<METADATA>fdr=0.0 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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26 #<METADATA>sensitivity=0.0 |
c51c08cc9fcc
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gatk4 commit 408454e8d10befcc76f38ab446091778537d4f31"
artbio
parents:
diff
changeset
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27 filter FP FDR FN FNR |