view test-data/filtered_Mutect2-out6_stats.tsv @ 2:646e6943bcd2 draft default tip

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/gatk4 commit 9c42369510cce59bf0dcb0edb440322d17b18339

#<METADATA>Ln prior of deletion of length 10=-20.72326583694641
#<METADATA>Ln prior of deletion of length 9=-20.72326583694641
#<METADATA>Ln prior of deletion of length 8=-20.72326583694641
#<METADATA>Ln prior of deletion of length 7=-20.72326583694641
#<METADATA>Ln prior of deletion of length 6=-20.72326583694641
#<METADATA>Ln prior of deletion of length 5=-20.72326583694641
#<METADATA>Ln prior of deletion of length 4=-20.72326583694641
#<METADATA>Ln prior of deletion of length 3=-20.72326583694641
#<METADATA>Ln prior of deletion of length 2=-20.72326583694641
#<METADATA>Ln prior of deletion of length 1=-8.055798885543242
#<METADATA>Ln prior of SNV=-5.222811848329794
#<METADATA>Ln prior of insertion of length 1=-20.72326583694641
#<METADATA>Ln prior of insertion of length 2=-20.72326583694641
#<METADATA>Ln prior of insertion of length 3=-8.055792507842842
#<METADATA>Ln prior of insertion of length 4=-20.72326583694641
#<METADATA>Ln prior of insertion of length 5=-20.72326583694641
#<METADATA>Ln prior of insertion of length 6=-20.72326583694641
#<METADATA>Ln prior of insertion of length 7=-20.72326583694641
#<METADATA>Ln prior of insertion of length 8=-20.72326583694641
#<METADATA>Ln prior of insertion of length 9=-20.72326583694641
#<METADATA>Ln prior of insertion of length 10=-20.72326583694641
#<METADATA>Background beta-binomial cluster=weight = 0.4314, alpha = 1.84, beta = 2.65
#<METADATA>High-AF beta-binomial cluster=weight = 0.0459, alpha = 9.99, beta = 1.03
#<METADATA>Binomial cluster=weight = 0.5227, mean = 0.237
#<METADATA>threshold=1.0
#<METADATA>fdr=0.0
#<METADATA>sensitivity=1.0
filter	FP	FDR	FN	FNR
weak_evidence	0.0	0.0	0.0	0.0
strand_bias	0.0	0.0	0.0	0.0
germline	0.0	0.0	0.0	0.0