Mercurial > repos > artbio > guppy_basecaller

comparison guppy_basecaller.xml @ 1:93b6cbff5ea4 draft

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"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/guppy commit d9a24dd18eb10e9b47aa5ad4414b8725df6d0eb3"
author artbio
date Thu, 19 Nov 2020 00:03:03 +0000
parents fb42dde97559
children cfc7ff08ad20
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0:fb42dde97559 1:93b6cbff5ea4
15 --num_callers 4 15 --num_callers 4
16 --records_per_fastq 0 16 --records_per_fastq 0
17 --cpu_threads_per_caller \${GALAXY_SLOTS:-2} 17 --cpu_threads_per_caller \${GALAXY_SLOTS:-2}
18 --disable_pings 18 --disable_pings
19 --qscore_filtering 19 --qscore_filtering
20 --calib_detect 20 ### --calib_detect
21 ]]></command> 21 ]]></command>
22 <inputs> 22 <inputs>
23 <param name="infiles" type="data_collection" format="h5" label="Fast5 input (datatype h5)" multiple="true"/> 23 <param name="infiles" type="data_collection" format="h5" label="Fast5 input (datatype h5)" multiple="true"/>
24 <param name="config" type="data" format="tar" label="Guppy basecall configuration model"/> 24 <param name="config" type="data" format="tar" label="Guppy basecall configuration model"/>
25 </inputs> 25 </inputs>