Mercurial > repos > artbio > lumpy_smoove

diff vcf2hrdetect.py @ 9:7dcf61950215 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/lumpy_smoove commit 5f62b58c65917afbb018296568c81ad132106012
author artbio
date Wed, 05 Apr 2023 15:56:13 +0000
parents ad8853ee9909
children
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--- a/vcf2hrdetect.py	Sun May 09 17:09:33 2021 +0000
+++ b/vcf2hrdetect.py	Wed Apr 05 15:56:13 2023 +0000
@@ -26,7 +26,7 @@
                               chrom, coordbreak, "TRA"]
 for id in list(vcfdict):
     if "_" in id:
-        del(vcfdict[id])
+        del vcfdict[id]
 for id in vcfdict.keys():  # only sv that are not of type TRA or INV
     chr1 = vcfdict[id][0]
     chr2 = vcfdict[id][0]