comparison test-data/all_fasta.loc @ 0:42ba283a0fe2 draft

"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/manta commit e6c5d87dcd848fc4910af968e73adc481c811d15"
author artbio
date Wed, 13 May 2020 15:15:07 -0400
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-1:000000000000 0:42ba283a0fe2
1 #This file lists the locations and dbkeys of all the fasta files
2 #under the "genome" directory (a directory that contains a directory
3 #for each build).
4 This file has the format (white space characters are TAB characters):
5 #
6 #<unique_build_id> <dbkey> <display_name> <file_path>
7 #
8 #So, it could look something like this:
9 #
10 #hg19canon hg19 Human (Homo sapiens): hg19 Canonical /path/to/genome/hg19/hg19canon.fa
11 #hg19full hg19 Human (Homo sapiens): hg19 Full /path/to/genome/hg19/hg19full.fa
12 #
13 #Your .loc file should contain an entry for each individual
14 #fasta file. So there will be multiple fasta files for each build,
15 #such as with hg19 above.
16 hg19 hg19 Human hg19 ${__HERE__}/cached_locally/cached_region.fa