Mercurial > repos > artbio > mircounts

comparison test-data/aga.22.gff3 @ 15:ffcd42f85b61 draft default tip

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mircounts commit 5eb8570dce4e22fb2759cc16c8e1ce9d304508fe
author artbio
date Sat, 10 Feb 2024 17:15:04 +0000
parents c163574c246f
children
comparison
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14:c163574c246f 15:ffcd42f85b61
9 # Hairpin precursor sequences have type "miRNA_primary_transcript". 9 # Hairpin precursor sequences have type "miRNA_primary_transcript".
10 # Note, these sequences do not represent the full primary transcript, 10 # Note, these sequences do not represent the full primary transcript,
11 # rather a predicted stem-loop portion that includes the precursor 11 # rather a predicted stem-loop portion that includes the precursor
12 # miRNA. Mature sequences have type "miRNA". 12 # miRNA. Mature sequences have type "miRNA".
13 # 13 #
14 # generated by mature_mir_gff_translation.py 2021-05-09 00:34:02.737449 14 # generated by mature_mir_gff_translation.py 2024-02-10 17:38:20.268084
15 # 15 #
16 aga-bantam . miRNA_primary_transcript 1 111 . + . ID=MI0001599;Alias=MI0001599;Name=aga-bantam 16 aga-bantam . miRNA_primary_transcript 1 111 . + . ID=MI0001599;Alias=MI0001599;Name=aga-bantam
17 aga-bantam . miRNA 70 92 . + . ID=MIMAT0001494;Alias=MIMAT0001494;Name=aga-bantam;Derives_from=MI0001599;Parent_mir_Name=aga-bantam 17 aga-bantam . miRNA 70 92 . + . ID=MIMAT0001494;Alias=MIMAT0001494;Name=aga-bantam;Derives_from=MI0001599;Parent_mir_Name=aga-bantam
18 aga-let-7 . miRNA_primary_transcript 1 90 . - . ID=MI0001600;Alias=MI0001600;Name=aga-let-7 18 aga-let-7 . miRNA_primary_transcript 1 90 . - . ID=MI0001600;Alias=MI0001600;Name=aga-let-7
19 aga-let-7 . miRNA 56 76 . - . ID=MIMAT0001495;Alias=MIMAT0001495;Name=aga-let-7;Derives_from=MI0001600;Parent_mir_Name=aga-let-7 19 aga-let-7 . miRNA 56 76 . - . ID=MIMAT0001495;Alias=MIMAT0001495;Name=aga-let-7;Derives_from=MI0001600;Parent_mir_Name=aga-let-7