Mercurial > repos > artbio > mutational_patterns

diff test-data/sig_contrib_table_v3.tsv @ 18:8d9f31389f33 draft

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"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit 1cb9c8fd0c74943a8e6de4c63ac5e4a84ef27430"
author artbio
date Sun, 17 Oct 2021 15:51:05 +0000
parents 31e7a33ecd71
children ca6c19ee7da0
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line diff
--- a/test-data/sig_contrib_table_v3.tsv	Tue Oct 05 22:28:34 2021 +0000
+++ b/test-data/sig_contrib_table_v3.tsv	Sun Oct 17 15:51:05 2021 +0000
@@ -1,5 +1,5 @@
-sample	s1	s2	s3	s4	s5	s6	s7a	s7b	s7c	s7d	s8	s9	s10a	s10b	s11	s12	s13	s14	s15	s16	s17a	s17b	s18	s19	s20	s21	s22	s23	s24	s25	s26	s27	s28	s29	s30	s31	s32	s33	s34	s35	s36	s37	s38	s39	s40	s41	s42	s43	s44	s45	s46	s47	s48	s49	s50	s51	s52	s53	s54	s55	s56	s57	s58	s59	s60	s84	s85
-ovary-I.vcf	0.0261662312700287	0	0	0.00540922040548445	0	0.0554522494221051	0.0015054005135302	0	0.0527698220499384	0	0.0887078997707257	0	0.000907076161215129	0	0	0	0.00816538925821039	0	0.0128589414347678	0.0380260440755711	0	0	0.0173905924247456	0.001707488229021	0	0.010276473882261	0	0	0.00537132652951311	0.0418328062226971	0.011268103748697	0	0.013513567633232	0	0.0299817999935266	0.0290828169035887	0.0455904351684802	0.00911446107696196	0.0142491074457184	0	0	0.0828680955875177	0	0.137846212289707	0	0	0	0.00955362702540194	0.0176518216878586	0	0	0	0	0	0.00791168443668074	0.023401746173643	0	0	0.0142889494092746	0	0	0.0589804306629367	0.127565493753874	0.00058468535308627	0	0	0
-ovary-H.vcf	0.0514943738497272	0	0	0.0087020810819626	0	0	0.00236410365956529	0	0.0283100865280861	0.00330015778410193	0.0876336183320928	0	0.00461986640013499	0	0	0	0.0149334722781705	0	0	0.0575304849089614	0	0.00251629772375885	0	0.0165652645823303	0	0.000624306444994269	0	0	0.00504372393616242	0.00966085594196363	0.00415555408979927	0.00663515443687386	0.0171493644187634	0	0.0481611871648976	0.00444934777109341	0.0328633359412982	0.0116426528342991	0.0171447988100082	0	0	0.0946683632396481	0	0.137633236641122	0	0	0	0	0.0602320275961475	0	0	0	0	0	0.0124382204627417	0.0101014447648236	0	0.00234093513264533	0.0255780469333522	0.0118621125591813	0	0.0844080841563258	0.123178981782342	0.00205845781262428	0	0	0
-lung-G.vcf	0.0835415571466835	0	0	0	0	0.0531396303027374	0.00733219232339216	0	0.0313762292215084	0	0.0606428164890939	0.0176603522234399	0	0.000123110879620826	0	0	0.00735095968187644	0	0	0.0290566556597906	0.00029875750108526	0	0.0203972540873668	0.0355580201715423	0	0.0123438369843411	0.00148831528108934	0	0.00702152929618746	0.0500581225968108	0	0	0	0	0.0483376674495861	0.00503826980581789	0.0375230365596794	0.000365640786534471	0.0173540188566111	0	0	0.119562508095986	0	0.0922495052872749	0	0	0.00186662484782185	0	0.00198383177758492	0	0	0.0016907139525808	0	0	0	0.0339551728551291	0	0.000506019602171982	0.0354612532013092	0	0	0.0800934470527665	0.0943176689178333	0	0.00204207638725024	0.0102632047174961	0
-lung-F.vcf	0.129733671535086	0	0.0756510632174742	0	0	0	0	0	0.0340346028561247	0	0.0771217892059738	0	0.00227780162121716	0.00924261610588687	0	0	0	0	0	0.0465201871969074	0	0	0.0110305938436319	0.0158255469126101	0	0.00374844346904832	0.00146787555295699	0	0.00847802739839135	0.0105235337001421	0	0.000114895596046716	0.0236577247003424	0	0.0645253165188412	0.00780877511904059	0.0367599879858517	0.00522232526398284	0.0100399736075406	0	0	0.087309725420689	0	0.0759894281641185	0	0	0.000534487830683315	0.00298777004029269	0.0229584360721825	0	0	0.0217298493319228	0	0.00070999042925293	0	0.0141214288614859	0	0.00249376674671315	0.0393307390657661	0	0	0.0241692429399726	0.120513106763722	0.00304686844730181	0	0.0103204084787993	0
+sample	SBS1	SBS2	SBS3	SBS4	SBS5	SBS6	SBS7a	SBS7b	SBS7c	SBS7d	SBS8	SBS9	SBS10a	SBS10b	SBS10c	SBS10d	SBS11	SBS12	SBS13	SBS14	SBS15	SBS16	SBS17a	SBS17b	SBS18	SBS19	SBS20	SBS21	SBS22	SBS23	SBS24	SBS25	SBS26	SBS27	SBS28	SBS29	SBS30	SBS31	SBS32	SBS33	SBS34	SBS35	SBS36	SBS37	SBS38	SBS39	SBS40	SBS41	SBS42	SBS43	SBS44	SBS45	SBS46	SBS47	SBS48	SBS49	SBS50	SBS51	SBS52	SBS53	SBS54	SBS55	SBS56	SBS57	SBS58	SBS59	SBS60	SBS84	SBS85	SBS86	SBS87	SBS88	SBS89	SBS90	SBS91	SBS92	SBS93	SBS94
+ovary-I.vcf	0.0248743382983054	0	0	0	0	0.0382804313784858	0.000279867877099847	0	0.0523368831013261	0	0.0882193437709409	0	0.00105713908429325	0	0	0	0	0	0.00790452113929918	0	0.0228952649764221	0.035824437322864	0	0	0.0157694785042366	0.00112106011995225	0	0.00901729432205061	0	0	0.0067314503274015	0.0424173427597118	0.00897709595233141	0	0.0134288190900345	0	0.0315118740824124	0.0274274413781644	0.0459722043929115	0.00919119609371442	0.0135875438956959	0	0	0.0813737079036436	0	0.134441510514793	0	0	0	0.00968535679523162	0.0232988957406608	0	0	0	0	0	0.00901138983347702	0.0232219272273402	0	0	0.0140535953847184	0	0	0.0588372989742489	0.126837942673735	0.000414033475201199	0	0	0	0	0.0123975208041955	0	0	0	0	0.00960179280510004	0	0
+ovary-H.vcf	0.0526112623195139	0	0	0.00259659019141931	0	0	0.00441492436160073	0	0.028442412784458	0.00371282908990969	0.0771150268514295	0	0.00469080414948085	0	0	0	0	0	0.0131075005010316	0	0	0.0564087542136608	0	0.00228775187171679	0	0.0197458393231762	0	0.00177238312166065	0	0	0.00886883514891954	0	0.00387092295756819	0.0034150231168899	0.0174808677883371	0	0.0435652656329046	0.001821180738257	0.0264091265962629	0.0107100101651646	0.0174453430547186	0	0	0.0961708355601418	0	0.121116601538177	0	0	0	0	0.0571796516660221	0	0	0	0	0.000214057521674493	0.0111211317159625	0.00829256700318903	0	0.00164798457109997	0.0258483341879308	0.00644458809280953	0	0.0846638702721653	0.122478370005574	0.00222471578608652	0	0.000420172000753205	0	0.00163043517541805	0.000141322538953654	0	0.0574873294316273	0.00242537895433406	0	0	0	0
+lung-G.vcf	0.0823617355865553	0	0	0	0	0.0525713539199432	0.00861488625601096	0	0.0339595873379564	0	0.0456255244916971	0.0145585252714382	0	0.000421381081383047	0	0	0	0	0.00522670784278192	0	0	0.0293382321445568	0.00139649570607906	0	0.0194196611974925	0.0386127956083362	0	0.013789732383022	0	0	0.0100733150661604	0.0349706130241875	0	0	0	0	0.0434093655847984	0.00181825891236839	0.0303474622606777	0	0.0187029901709085	0	0	0.120376065787024	0	0.0599280433448042	0	0	0.00132966985611013	0	0	0	0	0.0039271065334873	0	0	0	0.0280674592931216	0	0	0.035137879879521	0	0	0.0812463129866582	0.0917684488653737	0	0	0.0124734516843239	0	0.00901316909994899	0.00681265646517624	0	0.0647011123580966	0	0	0	0	0
+lung-F.vcf	0.125106083697333	0	0.0894527459328343	0	0	0	0	0	0.0324668080771622	0	0.0672874649502956	0	0.00268401866175131	0.00917023093306937	0	0	0	0	0	0	0	0.0451906045983062	0	0	0.00910592930802089	0.0167722110675364	0	0.0038298515888168	0	0	0.009531234514015	0	0	0	0.0232363343868912	0	0.062330351090351	0.00493364473237903	0.0324520312030243	0.00486738928923164	0.0100557162196348	0	0	0.0888476521405422	0	0.0556313157931215	0	0	0	0	0.020753584501296	0	0	0.0183541664469706	0	0.000330058861573153	0.00181335415290947	0.0123934694096205	0	0.00196180738612452	0.0392499133494657	0	0	0.0247940538178981	0.120319900452309	0.00358101555748017	0	0.0122742608109216	0.000420655172516775	0	0.0145849808127487	0	0.0316331756761206	0.00458398540772828	0	0	0	0