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annotate test-data/X_100000_Hum1.bam_Deletions.txt @ 1:078c6ab38858 draft default tip

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
author artbio
date Tue, 13 Feb 2024 10:53:40 +0000
parents decc6b5631dc
children
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0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
1 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
2 0 D 1 NT 0 "" ChrID X BP 2678 2680 BP_range 2678 2680 Supports 5 5 + 3 3 - 2 2 S1 12 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 69 69 3 3 2 2
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
3 TTCGACGAGCGCCTACAGCGAATTGCCGCTAAAACCTAAAAACAAAAAATTTATTAACAAATGAAATACAAATATACAAAATTCAAATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTGcACGCAACACATCCATATCCAACATAACAGACAAGAGGAGACGGGCCCTCAAACGTAAAACAATATCGCCAACTTTGCGCTTACAAACACAAAAAAATTTACAATTTTATGATGCCGTCTCCTCT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
4 ATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTG ACGCAACACATCCATATCCA + 2541 0 X_100000_Hum1.bam @HWI-36691003/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
5 ATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTG ACGCAACACATCCATATCCAACAT + 2550 0 X_100000_Hum1.bam @HWI-18630759/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
6 ATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTG ACGCAACACATCCATATCCA + 2541 0 X_100000_Hum1.bam @HWI-2940085/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
7 AAATTCAAATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTG ACGCAACACATCCATATCCAACATAACAGACAAGAGGAGACGGGCCCTCAAACGTAAAACAATATCGCCAACTTTGCG - 2994 0 X_100000_Hum1.bam @HWI-35723011/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
8 AAATTCAAATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTG ACGCAACACATCCATATCCAACATAACAGACAAGAGGAGACGGGCCCTCAAACGTAAAACAATATCGCCAACTTTGCG - 2994 0 X_100000_Hum1.bam @HWI-12975399/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
9 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
10 1 D 51970 NT 0 "" ChrID X BP 3911 55882 BP_range 3911 55886 Supports 7 7 + 2 2 - 5 5 S1 18 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 1 1 2 2 5 5
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
11 CAGACTATTTTTCCTCCCGAAAAACATACCTGGAAAACAAAAACAAGGCAACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAaaaat<51960>aatacAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAAAATTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
12 CCTAATGTATCTGAGAAATACA AAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTAT - 55922 0 X_100000_Hum1.bam @HWI-45145040/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
13 CCTAATGTATCTGAGAAATACA AAAAATTAGAGAAATCACAAAAATAAATAACA + 3752 0 X_100000_Hum1.bam @HWI-20131510/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
14 AACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACA AAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTA + 3835 0 X_100000_Hum1.bam @HWI-29185366/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
15 CCTGGAAAACAAAAACAAGGCAACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACA AAAAATTAGAGAAATCACAAAAATAAAT - 56074 0 X_100000_Hum1.bam @HWI-13515042/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
16 ACCTGGAAAACAAAAACAAGGCAACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATATA AAAAATTAGAGAAATCACAAAAATAAA - 55981 0 X_100000_Hum1.bam @HWI-37954302/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
17 CTCCCGAAAAACATACCTGGAAAACAAAAACAAGGCAACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACA AAAAATTAGAGAA - 56015 0 X_100000_Hum1.bam @HWI-2919186/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
18 CCTCCCGAAAAACATACCTGGAAAACAAAAACAAGGCAACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACA AAAAATTAGAGA - 55988 0 X_100000_Hum1.bam @HWI-19871417/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
19 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
20 2 D 1 NT 0 "" ChrID X BP 4037 4039 BP_range 4037 4042 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 24 24 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
21 AAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAAAATTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTaAAATAAAAGGCAAATAAAATAACACACATAAAATAGCAAACCTGACAGGCAAACTAGCAGATGCTAATTTGCAACACCATCCCGCTGACGTCACGCACGAAAATCCTTTCTCCAAGAGCGCAAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
22 GTCCTCAGCAACAATTCCTGACCCGGAACATCCT AAATAAAAGGCAAATAAAATAACACACATAAAATAGCAAACCTGACAGGCAAACTAGCAGATGCTAATTTGCAACACCATCCCGCTGACGT - 4208 0 X_100000_Hum1.bam @HWI-3056233/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
23 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
24 3 D 327 NT 0 "" ChrID X BP 4229 4557 BP_range 4229 4563 Supports 25 25 + 3 3 - 22 22 S1 92 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 7 18 3 3 22 22
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
25 ATTTGCAACACCATCCCGCTGACGTCACGCACGAAAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATtgcca<317>taaacTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
26 ACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATC - 4659 0 X_100000_Hum1.bam @HWI-3277934/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
27 TATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAAC - 4781 0 X_100000_Hum1.bam @HWI-19506718/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
28 CTGGGAAATAAATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGA - 4765 0 X_100000_Hum1.bam @HWI-22276267/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
29 TAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAA - 4637 0 X_100000_Hum1.bam @HWI-38096708/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
30 TAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAA - 4637 0 X_100000_Hum1.bam @HWI-24309078/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
31 GCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAA - 4786 0 X_100000_Hum1.bam @HWI-39075505/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
32 AAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTG - 4633 0 X_100000_Hum1.bam @HWI-14534420/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
33 CACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTAC - 4675 0 X_100000_Hum1.bam @HWI-508558/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
34 ACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTA - 4717 0 X_100000_Hum1.bam @HWI-17057283/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
35 AAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATG - 4627 0 X_100000_Hum1.bam @HWI-35638428/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
36 AAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAA - 4624 0 X_100000_Hum1.bam @HWI-39789891/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
37 AAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAA - 4711 0 X_100000_Hum1.bam @HWI-26322656/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
38 AAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAA - 4711 0 X_100000_Hum1.bam @HWI-29424587/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
39 AAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAA - 4666 0 X_100000_Hum1.bam @HWI-4441838/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
40 AAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTCCAAA - 4666 0 X_100000_Hum1.bam @HWI-39564451/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
41 AAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCA - 4792 0 X_100000_Hum1.bam @HWI-26542571/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
42 AAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACGACGACCTCCAAAATAACTTTCA - 4792 0 X_100000_Hum1.bam @HWI-12363975/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
43 AAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAAC + 3982 0 X_100000_Hum1.bam @HWI-39517234/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
44 ACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACT - 4616 0 X_100000_Hum1.bam @HWI-45862267/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
45 CAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAA - 4656 0 X_100000_Hum1.bam @HWI-41617787/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
46 CCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGA - 4641 0 X_100000_Hum1.bam @HWI-24539072/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
47 TCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACG + 4148 0 X_100000_Hum1.bam @HWI-17963329/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
48 CTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAAC - 4692 0 X_100000_Hum1.bam @HWI-22118156/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
49 ACGCACGAAAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGC - 4671 0 X_100000_Hum1.bam @HWI-40728320/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
50 CTGACGTCACGCACGAAAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTC + 4122 0 X_100000_Hum1.bam @HWI-27379833/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
51 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
52 4 D 1 NT 0 "" ChrID X BP 4704 4706 BP_range 4704 4711 Supports 2 2 + 0 0 - 2 2 S1 3 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 41 41 0 0 2 2
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
53 TGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCCCCAGATTAGCTATTACCTGAAAAACaAAAAATTAATGCAACTATATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTAC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
54 TCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCTGCAGATTAGCTATTGCCTGAAAAAC AAAAGTTAATGCAACTATATAAAC - 4770 0 X_100000_Hum1.bam @HWI-886730/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
55 TCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCTGCAGATTAGCTATTGCCTGAAAAAC AAAAGTTAATGCAACTATATAAAC - 4770 0 X_100000_Hum1.bam @HWI-360539/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
56 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
57 5 D 1 NT 0 "" ChrID X BP 4722 4724 BP_range 4722 4724 Supports 2 2 + 0 0 - 2 2 S1 3 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 38 38 0 0 2 2
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
58 ACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCCCCAGATTAGCTATTACCTGAAAAACAAAAAATTAATGCAACTAtATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTACCTATCTCTAACTTTACAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
59 TAATGCAACTA ATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTACCTATCTCT - 4952 0 X_100000_Hum1.bam @HWI-20738624/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
60 CCCAGATTAGCTATTACCTGAAAAACAAAAAATTAATGCAACTA ATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAA - 4843 0 X_100000_Hum1.bam @HWI-4123302/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
61 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
62 6 D 1 NT 0 "" ChrID X BP 4844 4846 BP_range 4844 4846 Supports 4 4 + 0 0 - 4 4 S1 5 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 6 6 0 0 4 4
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
63 CTATATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTACCTATCTCTAACTTTAcATTCATTTCCATGCCCGTATCGCTGCGGCGGACTTCTGCAACAAATCTTGAACCGGCGGCCCCAAGCTGCCAATCCCGACGCAATGGCCAATAGACGAGGCGCTCCTGGCAACTCTTGGCGAAC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
64 CTATTTCTAACTTTA ATTCATTTCCATGCCCGTATCGCTGCGGCGGACCTCTGCAACAAATCTTGAACCGGCGGCTCCAAGCTGCCAATCCCGACGCAATGGCCAATAGACGAGGCGCTCCTGGC - 4964 0 X_100000_Hum1.bam @HWI-72439/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
65 CTTACCTATTTCTAACTTTA ATTCATTTCCATGCCCGTATCGCTGCGGCGGACCCCTGCAACAAATCTTGAACCGGCGGCTCCAAGCTGCCAATCCCGACGCAATGGCCAATAGACGAGGCGCTC - 4973 0 X_100000_Hum1.bam @HWI-16514254/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
66 CTTACCTATTTCTAACTTTA ATTCATTTCCATGCCCGTATCGCTGCGGCGGACCTCTGCAACAAATCTTGAACCGGCGGCTCCAAGCTGCCAATCCCGACGCAATGGCCAATAGACGAGGCGCTC - 4973 0 X_100000_Hum1.bam @HWI-11235130/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
67 CTTACCTATTTCTAACTTTA ATTCATTTCCATGCCCGTATCGCTGCGGCGGACCTCTGCAACAAATCTTGAACCGGCGGCTCCAAGCTGCCAATCCCGACGCAATGGCCAATAGACGAGGCGCTC - 4973 0 X_100000_Hum1.bam @HWI-1893764/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
68 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
69 7 D 59620 NT 0 "" ChrID X BP 5694 65315 BP_range 5694 65315 Supports 5 5 + 4 4 - 1 1 S1 10 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 17 4 4 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
70 TGTTACATTCAAAAATGCAAATTATTGTACCTATATATTACAAACTCTGTAATCAAAGGCAAAATAAATTGTGGATGCGGAACAGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGTTAAAAaaaaa<59610>ctcacCTGCAACGTCTCCTGAAGCTTCCTGCGACTCGGTGCTTCCGTCCTTCTGGCGGGGGTACCTGAAAAGAAACAAATTAAGCAATGTTAGTCTTAAATGTCAATGTTTTT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
71 TCTCCGTACCTCCACCAGCAAAGATAAAA CTGCAACGTCTCCTGAAGCTTCCTGCGACTCGGTGCTTCCGTCCTTCTGGCGGGGGTACCTGAAAAGAAACAAATTAAGCAATGTTAGTCTTAAAT - 65439 0 X_100000_Hum1.bam @HWI-5971113/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
72 TATATATTACAAACTCTGTAATCAAAGGCAAAATAAATTGTGGATGCGGAACAGAATTCATTCTGTCTCCGTACCTCCACCAGCAAAGATAAAA CTGCAACGTCTCCTGAAGCTTCCTGCGACTC + 5600 0 X_100000_Hum1.bam @HWI-45616280/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
73 TATATATTACAAACTCTGTAATCAAAGGCAAAATAAATTGTGGATGCGGAACAGAATTCATTCTGTCTCCGTACCTCCACCAGCAAAGATAAAA CTGCAACGTCTCCTGAAGCTTCCTGCGACTC + 5600 0 X_100000_Hum1.bam @HWI-14563280/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
74 ACCTATATATTACAAACTCTGTAATCAAAGGCAAAATAAATTGTGGATGCGGAACAGAATTCATTCTGTCTCCGTACCTCCACCAGCAAAGATAAAA CTGCAACGTCTCCTGAAGCTTCCTGCGA + 5597 0 X_100000_Hum1.bam @HWI-33564979/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
75 ACCTATATATTACAAACTCTGTAATCAAAGGCAAAATAAATTGTGGATGCGGAACAGAATTCATTCTGTCTCCGTACCTCCACCAGCAAAGATAAAA CTGCAACGTCTCCTGAAGCTTCCTGCGA + 5597 0 X_100000_Hum1.bam @HWI-32959379/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
76 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
77 8 D 60065 NT 0 "" ChrID X BP 5935 66001 BP_range 5935 66003 Supports 9 9 + 7 7 - 2 2 S1 24 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 18 17 7 7 2 2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
78 AATCCGCGCTTTCCCTTGCTAAATATTCTGACGCGCAAATATAATTTAAATCGCCTTTTCTTTTTGACAAATTAAAAGTTTAAATATTGTCTTCCGGCCGCAAAGTTAAAACCGCGACAATAAAAaacaa<60055>acaatAAAAAACAATTAATCGACAAACGAAAAGCGAACAATTACACTTGTGCAAAATCGACAAGCTGCCGTTATAACAAAAAGGAGACGAATAACCACAAAGAACTAAAGTTA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
79 CAATAAAA AAAAAACAATTAATCGACAAACGAAAAGCGAACAATTACACTTGTGC + 5931 0 X_100000_Hum1.bam @HWI-38064939/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
80 CAATAAAA AAAAAACAATTAATCGACAAACGAAAAG + 5931 0 X_100000_Hum1.bam @HWI-31361550/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
81 CAATAAAA AAAAAACAATTAATCGACAAACGAAAAGCGAACAATTACACTTGTGCAAAATCGACAAGCTGCCGTTATAACAAAAAGGAGACGAATAACCACAAAGAACTAAAGTTAAACTACCAG + 5931 0 X_100000_Hum1.bam @HWI-30153092/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
82 CAATAAAA AAAAAACAATTAATCGACAAACGAAAAGCGAACAATTACACTTGTGCAAAATCGACAAGCTGCCGTTATAACAAAAAGGAGACGAATAACCACAAAGAACTAAAGTTAAACTACCAG + 5931 0 X_100000_Hum1.bam @HWI-3008455/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
83 TTTAAATATTGTCTTCCGGCCGCAAAGTTAAAACCGCGACAATAAAA AAAAAACAATTAATCGACAAACGAAAAGCGAACAATTACACTTG + 5888 0 X_100000_Hum1.bam @HWI-16849452/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
84 CTTTTCGTTTTGACAAATTAAAAGTTTAAATATTGTCTTCCGGCCGCAAAGTTAAAACCGCGACAATAAAA AAAAAACAATTAA - 66157 0 X_100000_Hum1.bam @HWI-31804145/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
85 CTTTTCGTTTTGACAAATTAAAAGTTTAAATATTGTCTTCCGGCCGCAAAGTTAAAACCGCGACAATAAAA AAAAAACAATTAA - 66157 0 X_100000_Hum1.bam @HWI-30434545/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
86 CTTTTCGTTTTGACAAATTAAAAGTTTAAATATTGTCTTCCGGCCGCAAAGTTAAAACCGCGACAATAAAA AAAAAACAATTAATCGAC + 5864 0 X_100000_Hum1.bam @HWI-43881794/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
87 AATATAATTTAAATCGCCTTTTCGTTTTGACAAATTAAAAGTTTAAATATTGTCTTCCGGCCGCAAAGTTAAAACCGCGACAATAAAA AAAAAACAATTAATCGACAAACGAAAAGCGAACAATT + 5798 0 X_100000_Hum1.bam @HWI-2160431/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
88 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
89 9 D 60064 NT 0 "" ChrID X BP 5936 66001 BP_range 5936 66002 Supports 4 4 + 2 2 - 2 2 S1 9 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 17 17 2 2 2 2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
90 ATCCGCGCTTTCCCTTGCTAAATATTCTGACGCGCAAATATAATTTAAATCGCCTTTTCTTTTTGACAAATTAAAAGTTTAAATATTGTCTTCCGGCCGCAAAGTTAAAACCGCGACAATAAAAAacaat<60054>acaatAAAAAACAATTAATCGACAAACGAAAAGCGAACAATTACACTTGTGCAAAATCGACAAGCTGCCGTTATAACAAAAAGGAGACGAATAACCACAAAGAACTAAAGTTA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
91 CAAAGTTAAAACCGCGACAATAAAAA AAAAAACAATTAATCGACAAA + 5910 0 X_100000_Hum1.bam @HWI-26602340/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
92 CTTCCGGCCGCAAAGTTAAAACCGCGACAATAAAAA AAAAAACAATTA - 66217 0 X_100000_Hum1.bam @HWI-29441672/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
93 CTTCCGGCCGCAAAGTTAAAACCGCGACAATAAAAA AAAAAACAATTAATCGACAAACGAAAAGCGAA - 66217 0 X_100000_Hum1.bam @HWI-5700068/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
94 CTTCCGGCCGCAAAGTTAAAACCGCGACAATAAAAA AAAAAACAATTAATCGACAAACGAAAAGCGAACAATTACACTTGTGCAAAATCGACAAGCTGCCGTTATAACAAAAAGGAGACGAATAA + 5900 0 X_100000_Hum1.bam @HWI-27434100/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
95 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
96 10 D 93 NT 0 "" ChrID X BP 6473 6567 BP_range 6473 6568 Supports 25 25 + 11 11 - 14 14 S1 180 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 27 34 11 11 14 14
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
97 AAGAAAATCCATAGAGACGAAAAGAAGAAAGTCGACCGCAACCAGGAAGAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAGggtat<83>acgaaGAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGACAATTCTCAGAATAATACAACCATTATT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
98 CAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGACAATTCTCAGAATAATACAACCATTATT - 6691 0 X_100000_Hum1.bam @HWI-32799209/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
99 CAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGACAATTCTCAGAATAATACAACCATTATT - 6691 0 X_100000_Hum1.bam @HWI-6252094/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
100 ACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGACAATTCT + 6566 0 X_100000_Hum1.bam @HWI-18354876/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
101 AAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGA + 6369 0 X_100000_Hum1.bam @HWI-32617519/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
102 AAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGA + 6369 0 X_100000_Hum1.bam @HWI-20093588/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
103 AAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGA - 6691 0 X_100000_Hum1.bam @HWI-17966998/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
104 AAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGA - 6691 0 X_100000_Hum1.bam @HWI-15202821/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
105 AAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGA + 6369 0 X_100000_Hum1.bam @HWI-7277176/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
106 AGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCA - 6691 0 X_100000_Hum1.bam @HWI-18354876/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
107 AGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTGCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAA - 6858 0 X_100000_Hum1.bam @HWI-14247255/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
108 AGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAA + 6566 0 X_100000_Hum1.bam @HWI-43166623/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
109 GAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCA + 6323 0 X_100000_Hum1.bam @HWI-39330985/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
110 AACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCC + 6387 0 X_100000_Hum1.bam @HWI-31621137/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
111 AACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCC + 6566 0 X_100000_Hum1.bam @HWI-39858663/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
112 AACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCC + 6387 0 X_100000_Hum1.bam @HWI-4924534/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
113 AACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCC + 6566 0 X_100000_Hum1.bam @HWI-21340168/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
114 AAGAAGAAAGTCGACCGCAACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCA - 6474 0 X_100000_Hum1.bam @HWI-34930000/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
115 AAGAAGAAAGTCGACCGCAACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCA - 6474 0 X_100000_Hum1.bam @HWI-9781965/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
116 AAGAAGAAAGTCGACCGCAACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCA - 6691 0 X_100000_Hum1.bam @HWI-32617519/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
117 AAGAAGAAAGTCGACCGCAACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCA - 6691 0 X_100000_Hum1.bam @HWI-20093588/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
118 AAGAAGAAAGTCGACCGCAACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCA - 6691 0 X_100000_Hum1.bam @HWI-7277176/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
119 AAGAAGAAAGTCGACCGCAACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCA - 6474 0 X_100000_Hum1.bam @HWI-17966998/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
120 AAGAAGAAAGTCGACCGCAACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCA - 6474 0 X_100000_Hum1.bam @HWI-15202821/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
121 AAGATGAAAGTCGACCGCAACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCA - 6474 0 X_100000_Hum1.bam @HWI-4835601/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
122 AAGAAGAAAGTCGACCGCAACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCA + 6323 0 X_100000_Hum1.bam @HWI-15130807/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
123 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
124 11 D 1 NT 0 "" ChrID X BP 11211 11213 BP_range 11211 11217 Supports 2 2 + 2 2 - 0 0 S1 3 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 18 18 2 2 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
125 GGTAGAGACAACCACCAAATGACAGCGGCGCGGGATGCAGCCACCATCTTTGAACTACCTGCAACGTTGGCCGGACATACATGTTGCAAGTGGCGCGCACCCAGCGCCTGCAACAGGCCCCTGCCaAAAATCAACAAATACTCACCTGCAACGTCTCCTGAAGCTTCCTGCGACTCGGTGCTTCCGTCCTTCTGGCGGGGGTACCTGAAAAGAAACAAATTAAGCAATGTTAGTCTTAAATGTCAATGTT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
126 GAACTACCTGCAACGTTGGCCGGACATACATGTTGCAAGTGGCGCGCACCCAGCGCCTGCAACAGGCCCCTGCC AAAATCAACAAATACTCACCTGCAACGTCTCCTGAAGCTTCCTGCGACTCG + 11087 0 X_100000_Hum1.bam @HWI-46361604/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
127 GAACTACCTGCAACGTTGGCCGGACATACATGTTGCAAGTGGCGCGCACCCAGCGCCTGCAACAGGCCCCTGCC AAAATCAACAAATACTCACCTGCAACGTCTCCTGAAGCTTCCTGCGACTCG + 11087 0 X_100000_Hum1.bam @HWI-2967327/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
128 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
129 12 D 3 NT 0 "" ChrID X BP 15567 15571 BP_range 15567 15583 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 1 1 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
130 AAAACAAATATTACAATAAGAAATAGCACGCGATTTTTCTGCTTCGTTTCCGCTTGGTACAAGTGAGACCATTCTCCCTATATGCCATTCTAGTATATTTGCCCGATAAGCGATATGCTGGCGGCaaaAAAAAAAAAAAAGATAATAGCCGATAAGCCCGCCAAAAAAAAGCGCGAAATATCGATAACGAGCTGGCACGAAAATTGCTGGCATATCGATCAACCGCTGTGTCTTTGAGCTATCGAAAAAG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
131 GATATGCTGGCGGC AAAAAAAAAAAAGATAATAGCCGATAAG + 15415 0 X_100000_Hum1.bam @HWI-9766224/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
132 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
133 13 D 1 NT 0 "" ChrID X BP 15751 15753 BP_range 15751 15753 Supports 5 5 + 0 0 - 5 5 S1 6 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 2 2 0 0 5 5
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
134 TAACGAGCTGGCACGAAAATTGCTGGCATATCGATCAACCGCTGTGTCTTTGAGCTATCGAAAAAGCCCGCCTACGCGCCTAGCCCAAATTTGCAAGTCAGTTGAGATTATAAAACCGACAGAGGcGCGCGCGCAACAGTAGCTAAAAGTGAAGCCAGCAGCAACAACAACAACTAATGGACGGCCAGAACGTGAACCAAAGCGGAGGATGGGCATCGGTTTTATCCATCTCATCGGACGATGGTAACTG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
135 AACCGACAGAGG GCGCGCGCAACAGTAACTAAAAGTGAAGCCAGCAGCAACAACAACAACTAATGGACGGACAGAACGTGAGCCAAAGCAGAGGATGGGCATCGGTTTTATCCATCTCATCGGAC - 15975 0 X_100000_Hum1.bam @HWI-32826972/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
136 AAAACCGACAGAGG GCGCGCGCAACAGTAACTAAAAGTGAAGCCAGCAGCAACAACAACAACTAATGGACGGACAGAACGTGAGCCAAAGCGGAGGATGGGCATCGGTTTTATCCATCTCATCGG - 15961 0 X_100000_Hum1.bam @HWI-42973087/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
137 AAAACCGACAGAGG GCGCGCGCAACAGTAACTAAAAGTGAAGCCAGCAGCAACAACAACAACTAATGGACGGACAGAACGTGAGCCAAAGCGGAGGATGGGCATCGGTTTTATCCATCTCATCGG - 15950 0 X_100000_Hum1.bam @HWI-33191199/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
138 AAAACCGACAGAGG GCGCGCGCAACAGTAACTAAAAGTGAAGCCAGCAGCAACAACAACAACTAATGGACGGACAGAACGTGAGCCAAAGCGGAGGATGGGCATCGGTTTTATCCATCTCATCGG - 15950 0 X_100000_Hum1.bam @HWI-27921262/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
139 CCCAAATTTGCAAGTCATTTGAGATTATAAAACCGACAGAGG GCGCGCGCAACAGTAACTAAAAGTGAAGCCAGCAGCAACAACAACAACTAATGGACGGACAGAACGTGAGCCAAAGCGGAGGA - 15956 0 X_100000_Hum1.bam @HWI-16040907/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
140 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
141 14 D 3 NT 0 "" ChrID X BP 15948 15952 BP_range 15948 15958 Supports 3 3 + 2 2 - 1 1 S1 6 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 10 10 2 2 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
142 CAAAGCGGAGGATGGGCATCGGTTTTATCCATCTCATCGGACGATGGTAACTGCTCATCCTCGCCGCCATCAGCTATAGTCTCATCGCTGGATACCACGCCAACGTCAAATGAAACCACCATAGTaagAAGAAGCCTATATCAAACAAATGCCGACATGAAATCTTACGATTTTGAAAATATTGTATTAAATGAAAATAAAAATACCATATTGCCAGACCCTTTATTTGTTGATAAATGCGGGAGTACTG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
143 CCATCAGCTATAGTCTCATCGCTGGATACCACGCCAACGTCAAATGAAACCACCATAGT AAGAAGCCTATATCAAACAAATGGCGACATGAAATCTTACGATTTTGAAAATATTGTATTAAATGA + 15840 0 X_100000_Hum1.bam @HWI-7006105/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
144 ATCGGTTTTATCCATCTCATCGGACGATGGTAACTGCTCATCCTCGCCGCCATCAGCTATAGTCTCATCGCTGGATACCACGCCAACGTCAAATGAAACCACCATAGT AAGAAGCCTATATCAAA - 16011 0 X_100000_Hum1.bam @HWI-7006105/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
145 GGGCATCGGTTTTATCCATCTCATCGGACGATGGTAACTGCTCATCCTCGCCGCCATCAGCTATAGTCTCATCGCTGGATACCACGCCAACGTCAAATGAAACCACCATAGT AAGAAGCCTATAT + 15737 0 X_100000_Hum1.bam @HWI-42973087/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
146 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
147 15 D 40 NT 0 "" ChrID X BP 20725 20766 BP_range 20725 20767 Supports 2 2 + 1 1 - 1 1 S1 4 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 5 6 1 1 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
148 TTTGAGCGAAAGGAATACTGCTCAGCGGTTTTCCTTGACATCTCTGAGGCTTTCGATAGGGTCTGGCACGAAGGCCTTTTACTTAAACTAGCTAAAATATTACCATACAACCTATACATTATTCTcgaaa<30>aagacCAAGCTGGAGAGACTTCGAGAGCAGGACAAATAGGCGCAGGGGTGCCCCAAGGAAGCAACCTTGGACCCATACTGTACTCTATCTTCTCCTCAGACATGCCACTCCCACAC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
149 GGGTATGGCACGAAGGCCTTTTACTTAAACTAGCTAAAATATTACCATACAACCTATACATTATTCT CAAGCTGGAGAGACTTCGAGAACAGGGCAAATAGGCGCAGGTGTGCCCCAAGGAAGCA - 20743 0 X_100000_Hum1.bam @HWI-17080904/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
150 GCTCAGCGGTTTTCCTTGACATCTCTGAGGCTTTCGATAGGGTATGGCACGAAGGCCTTTTACTTAAACTAGCTAAAATATTACCATACAACCTATACATTATTCT CAAGCTGGAGAGACTTCGA + 20619 0 X_100000_Hum1.bam @HWI-5907093/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
151 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
152 16 D 1 NT 0 "" ChrID X BP 22392 22394 BP_range 22392 22400 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 1 1 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
153 CTGCGACTGCGGCCTTCTGCCGTTCGGCTCCTGATGGATCCATCTGCTGCTGGAATGGGTGCCACACCGGCGCTCCAACCTAAAAGAAAGATAATATGTCTTAGTTTTCTTTCCCTTTTTCTCATaAAAAAACAACAGCTCATCTGGAGTCTGATAATAGCTTTAGCTCACCAAGACAGCAAAAACAACAGCATCAAGGCCAGCAACAGTGGAGGCAGAGACCAAGCGGTTTGCTGAACATTTCGCTGCC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
154 ATATGTCTTAGTTTTCTTTCCCTTTTTCTCAT AAAAAACAAAAGCTCATCTGGAGTCTGATAATAGCTTTAGCTCACCAAGACAGCAAAAACAACAGCATCAAGGCCAGCAACAGTGGAGGCAGA + 22360 0 X_100000_Hum1.bam @HWI-7945605/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
155 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
156 17 D 57 NT 0 "" ChrID X BP 26531 26589 BP_range 26531 26590 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 0 0 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
157 TCAGTCAGACTGTACTCACGCATGCACTTAGACAAACCGAAGCCTATTCCACAAAAGGCTGTGAGTGCACCAAAGTTGACGGGCCACGCCGGCCGATGCTTGCTGCATACCGGCATCTCCGCATCagcga<47>cgcagAAAAACAAATATTACAATAAGAAATAGCACGCGATTTTTCTGCTTCGTTTCCGCTTGGTACAAGTGAGACCATTCTCCCTATATGCCATTCTAGTATATTTGCCCGATAAG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
158 CCGGCCGATGCTTGCTGCATACCGGCATCTCCGCATC AAAAACAAATATTACAATAAGAAATAGC - 26559 0 X_100000_Hum1.bam @HWI-43577205/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
159 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
160 18 D 1 NT 0 "" ChrID X BP 33898 33900 BP_range 33898 33906 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
161 CTGCGACTGCGGCCTTCTGCCGTTCGGCTCCTGATGGATCCATCTGCTGCTGGAATGGGTGCCACACCGGCGCTCCAACCTAAAAGAAAGATAATATGTCTTAGTTTTCTTTCCCTTTTTCTCATaAAAAAACAACAGCTCATCTGGAGTCTGATAATAGCTTTAGCTCACCAAGACAGCAAAAACAACAGCATCAAGGCCAGCAACAGTGGAGGCAGAGACCAAGCGGTTTGCTGAACATTTCGCTGCC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
162 CTAAAAGAAAGATAATATGTCTTAGTTTTCTTTCCCTTTTTCTCAT AAAAAACAAAAGCTCATCTGGAGTCTGATAATAGCTTTAGCTCACCAAGACAGCAAAAACAACAGCATCAAGGCCAGCA - 34163 0 X_100000_Hum1.bam @HWI-21479160/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
163 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
164 19 D 4 NT 0 "" ChrID X BP 36790 36795 BP_range 36790 36801 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 0 0 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
165 TGGCAGCAGCAGGGAGATTTCATTGCTGCAGTCGCCAAATTACATGCATCCTACGACTCGACTCACGCTTTTTGGCCCCTGGCCGATCTTCATATATCTCAAATCGACGGCTGCTTTTACCCTGGaaaaAAAAAAGGAGCTTGGGTTATATTGAACTACACTAGGCGGCGACACACTCACCAGCAGCAGCCAGAACAACAACAGCGGCAGAAGTAGCAGGAAATTATCTCACTGCAAAATCCAATTGGCA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
166 CTGCTTTCACCCTGG AAAAAAGAAGC - 37023 0 X_100000_Hum1.bam @HWI-23520852/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
167 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
168 20 D 3 NT 0 "" ChrID X BP 39125 39129 BP_range 39125 39135 Supports 3 3 + 2 2 - 1 1 S1 6 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 1 1 2 2 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
169 CAAAGCGGAGGATGGGCATCGGTTTTATCCATCTCATCGGACGATGGTAACTGCTCATCCTCGCCGCCATCAGCTATAGTCTCATCGCTGGATACCACGCCAACGTCAAATGAAACCACCATAGTaagAAGAAGCCTATATCAAACAAATGCCGACATGAAATCTTACGATTTTGAAAATATTGTATTAAATGAAAATAAAAATACCATATTGCCAGACCCTTTATTTGTTGATAAATGCGGGAGTACTG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
170 CCATCAGCTATAGTCTCATCGCTGGATACCACGCCAACGTCAAATGAAACCACCATAGT AAGAAGCCTATATCAAACAAATGGCGACATGAAATCTTACGATTTTGAAAATATTGTATTAAATGA + 39017 0 X_100000_Hum1.bam @HWI-1255350/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
171 TTTATCCATCTCATCGGACGATGGTAACTGCTCATCCTCGCCGCCATCAGCTATAGTCTCATCGCTGGATACCACGCCAACGTCAAATGAAACCACCATAGT AAGAAGCCTATATCAAACAAATG + 38968 0 X_100000_Hum1.bam @HWI-6058307/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
172 ATCGGTTTTATCCATCTCATCGGACGATGGTAACTGCTCATCCTCGCCGCCATCAGCTATAGTCTCATCGCTGGATACCACGCCAACGTCAAATGAAACCACCATAGT AAGAAGCCTATATCAAA - 39188 0 X_100000_Hum1.bam @HWI-1255350/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
173 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
174 21 D 40 NT 0 "" ChrID X BP 43902 43943 BP_range 43902 43944 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 3 5 1 1 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
175 TTTGAGCGAAAGGAATACTGCTCAGCGGTTTTCCTTGACATCTCTGAGGCTTTCGATAGGGTCTGGCACGAAGGCCTTTTACTTAAACTAGCTAAAATATTACCATACAACCTATACATTATTCTcgaaa<30>aagacCAAGCTGGAGAGACTTCGAGAGCAGGACAAATAGGCGCAGGGGTGCCCCAAGGAAGCAACCTTGGACCCATACTGTACTCTATCTTCTCCTCAGACATGCCACTCCCACAC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
176 GATAGGGTATGGCACGAAGGCCTTTTACTTAAACTAGCTAAAATATTACCATACAACCTATACATTATTCT CAAGCTGGAGAGACTTCGAGAACAGGGCAAATAGGCGCAGGTGTGCCCCAAGGA + 43755 0 X_100000_Hum1.bam @HWI-3894915/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
177 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
178 22 D 1 NT 0 "" ChrID X BP 45569 45571 BP_range 45569 45577 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 0 0 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
179 CTGCGACTGCGGCCTTCTGCCGTTCGGCTCCTGATGGATCCATCTGCTGCTGGAATGGGTGCCACACCGGCGCTCCAACCTAAAAGAAAGATAATATGTCTTAGTTTTCTTTCCCTTTTTCTCATaAAAAAACAACAGCTCATCTGGAGTCTGATAATAGCTTTAGCTCACCAAGACAGCAAAAACAACAGCATCAAGGCCAGCAACAGTGGAGGCAGAGACCAAGCGGTTTGCTGAACATTTCGCTGCC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
180 TTTCTCAT AAAAAACAAAAGCTCATCTGGAGTCTGATAATAGCTTTAGCTCACCAAGACAGCAAAAACAACAGCATCAAGGCCAGCAACAGTGGAGGCAGAGACCAAGCGGTTTGCTGAACATTT - 45685 0 X_100000_Hum1.bam @HWI-17610951/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
181 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
182 23 D 57 NT 0 "" ChrID X BP 49708 49766 BP_range 49708 49767 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 0 0 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
183 TCAGTCAGACTGTACTCACGCATGCACTTAGACAAACCGAAGCCTATTCCACAAAAGGCTGTGAGTGCACCAAAGTTGACGGGCCACGCCGGCCGATGCTTGCTGCATACCGGCATCTCCGCATCagcga<47>cgcagAAAAACAAATATTACAATAAGAAATAGCACGCGATTTTTCTGCTTCGTTTCCGCTTGGTACAAGTGAGACCATTCTCCCTATATGCCATTCTAGTATATTTGCCCGATAAG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
184 GCTGCATACCGGCATCTCCGCATC AAAAACAAATATTACAATAAGAAATAGCACGCGATTTTTCTG - 49831 0 X_100000_Hum1.bam @HWI-7542003/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
185 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
186 24 D 8722 NT 0 "" ChrID X BP 51008 59731 BP_range 51008 59738 Supports 2 2 + 2 2 - 0 0 S1 3 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 23 29 2 2 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
187 CAATAAAAAATTATGCGCGACTTCCAACTTTGTAACTCCCAGCATTTTTCCGCCGCTCATCACTCCCGTTTTCAAGAGCAAGGCAGCTCAATCTGTTTACGAGGAATCCAAAGCCAGAAATGGACccccc<8712>atggaCCCCCCCCGCCGGCCCTCGCCTGCAGCATCAATGCCTCTGCTCGCAGCGCAGCGGCGCCACCCGGGATCGCCCCCCTACCCCCTCATAATACAGATGCAGAGCTGCCTC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
188 CGAGGAATCCAAAGCCAGAAATGGAC CCCCCCCCGCCGGCCCTCGCCTGCAGCATCAATGCCTCTGCTCGCAGCGCAGCGGCGCCACCCGGGATCGCCCCCCTACCCCCT + 50838 0 X_100000_Hum1.bam @HWI-38735938/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
189 GCTCATCACTCCCGTTTTCAAGAGCAAGGCAGCTCAATCTGTTTACGAGGAATCCAAAGCCAGAAATGGAC CCCCCCCCGCCGGCCCCCGCCTGCAGCATCAATGCCTCTGCTCGCAGCGCAGCG + 50893 0 X_100000_Hum1.bam @HWI-11923621/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
190 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
191 25 D 5 NT 0 "" ChrID X BP 53485 53491 BP_range 53485 53493 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 1 1 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
192 AGGAAACGGGCCTTGTAAAAGCAAAACAAAATCGCCAAATTTTGCGATTATAAACACAAAAAATTGACAATTTTACAATGCCGCCTGCACCTCCTGTTGCCACTGCATCAACAAGGATCAGTAGCgcggaGCTGATGCCACTTTAAAAAGCTGAAAAATCCGTCCACAAAATGTATACTCTTCCTCAGTATCATACTGTCAACGAACTTCCACTAACCTGCAATGAAAGGAAAATAAATAAGTATATGAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
193 CCTCCTGTTGCCACTGCATCAATAAGGATCACTAGC GCTGATGCCACTTTAAAAAGCTGAAAAATCCGTCCA + 53173 0 X_100000_Hum1.bam @HWI-1732005/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
194 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
195 26 D 56 NT 0 "" ChrID X BP 53919 53976 BP_range 53919 53982 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 2 1 NumSupSamples 1 1 X_100000_Hum1.bam 5 8 1 1 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
196 TATCTAATTGCCAATTCGACGACTCCAAATCCGCGGCACACCGGCGGCGATGGCCCATAAATAAAAGGCCTCCTAATAAATTACAAAACGTACCTGAAAAACCAAAAATTAACGCAACCATAAAAacaaa<46>gaaatACAAAAACAATAATTAACGCAATTAATAAATCAAATAAATACAAGTATAACACTTACTTCCAAGCTAATGTACCTGAAAAACAAAAACAAAACAAAAATTAATTCAATAAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
197 AAAAACTAAAAATTAACACAACCATAAAA ACAAAACCAAT + 53792 2 X_100000_Hum1.bam @HWI-24429584/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
198 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
199 27 D 504 NT 0 "" ChrID X BP 55429 55934 BP_range 55429 55946 Supports 8 8 + 0 0 - 8 8 S1 9 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 12 0 0 0 8 8
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
200 CTATATAAACAAATAAATACACAAATAATACTTACCTCCGAACTGCATTCCACCTAATGTACCTGAAAAAATACAAAAATTACAGAAATCACAAAAATAAATAACAAATGCTATACTTACCTAATtttaa<494>taaaaTTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAAAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
201 AACAAAGGTTATACTTACCTAAT TTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACA - 56149 0 X_100000_Hum1.bam @HWI-42977092/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
202 AACAAAGGTTATACTTACCTAAT TTTAATATTACATCCGTTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACA - 56149 0 X_100000_Hum1.bam @HWI-17662060/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
203 ACAAAAATAAATAACAAAGGTTATACTTACCTAAT TTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAA - 56033 0 X_100000_Hum1.bam @HWI-27317211/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
204 ACAAAAATAAATAACAAAGGTTATACTTACCTAAT TTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAA - 56033 0 X_100000_Hum1.bam @HWI-17395941/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
205 AGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAAT TTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAA - 56161 0 X_100000_Hum1.bam @HWI-20297375/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
206 AGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAAT TTTAATATTACATCCAT - 56042 0 X_100000_Hum1.bam @HWI-32680310/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
207 ATACAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAAT TTTAATATTACATCCATT - 56057 0 X_100000_Hum1.bam @HWI-30087311/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
208 ATACAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAAT TTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAAC - 56057 0 X_100000_Hum1.bam @HWI-27539376/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
209 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
210 28 D 327 NT 0 "" ChrID X BP 56200 56528 BP_range 56200 56534 Supports 21 21 + 7 7 - 14 14 S1 120 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 7 22 7 7 14 14
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
211 ATTTGCAACACCATCCCGCTGACGTCACGCACGAAAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATtgcca<317>taaacTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
212 TATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATG - 56766 0 X_100000_Hum1.bam @HWI-33400121/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
213 CTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGA - 56736 0 X_100000_Hum1.bam @HWI-45325275/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
214 TAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAA + 56059 0 X_100000_Hum1.bam @HWI-44133590/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
215 GCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAA - 56757 0 X_100000_Hum1.bam @HWI-1144677/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
216 AAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAA - 56595 0 X_100000_Hum1.bam @HWI-5377193/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
217 AAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAA - 56682 0 X_100000_Hum1.bam @HWI-34798038/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
218 AAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAA - 56682 0 X_100000_Hum1.bam @HWI-20563265/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
219 AAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAA - 56637 0 X_100000_Hum1.bam @HWI-22429267/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
220 AAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAA - 56637 0 X_100000_Hum1.bam @HWI-7946303/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
221 AAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCA - 56763 0 X_100000_Hum1.bam @HWI-20194856/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
222 CAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAA - 56627 0 X_100000_Hum1.bam @HWI-17920974/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
223 GCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCA + 55943 0 X_100000_Hum1.bam @HWI-40051364/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
224 AGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCC + 56093 0 X_100000_Hum1.bam @HWI-16516358/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
225 AGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCC - 56578 0 X_100000_Hum1.bam @HWI-842663/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
226 CTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAAC + 56049 0 X_100000_Hum1.bam @HWI-12042530/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
227 CTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAAC + 56049 0 X_100000_Hum1.bam @HWI-46528/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
228 AAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCAT - 56765 0 X_100000_Hum1.bam @HWI-13265499/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
229 ACGCACGAAAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGC - 56642 0 X_100000_Hum1.bam @HWI-24154247/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
230 CTGACGTCACGCACGAAAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTC + 56093 0 X_100000_Hum1.bam @HWI-16516358/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
231 CTGACGTCACGCACGAAAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTC - 56578 0 X_100000_Hum1.bam @HWI-842663/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
232 GCTGACGTCACGCACGAAAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTT + 56003 0 X_100000_Hum1.bam @HWI-31341510/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
233 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
234 29 D 1 NT 0 "" ChrID X BP 56449 56451 BP_range 56449 56451 Supports 3 3 + 2 2 - 1 1 S1 6 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 7 7 2 2 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
235 ACAAATAAGAATGCGACTCAAAATTAAGAAATAACACACAAAAAATAACAAACCTGACAGGCAAACTAGCAGATGCTAATTTGCAACACCATCATGCTGACGTCACGCACGAAAATCCTTTCTCCtAAGACCGCAAAAGCTGAAAAAGGAAACACAAGCTAATACTGGGAAATATATATTTTTAACAAAATACTTATCTAAACTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
236 ACACCATCCTGCTGACGTCACGCACGAAAATCCTCTCTCC AAGACCGCAGAAACTGAAAAAGGAAACACAAGCTAATACTGGGAA - 56493 0 X_100000_Hum1.bam @HWI-7685870/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
237 ACACCATCCTGCTGACGTCACGCACGAAAATCCTCTCTCC AAGACCGCAGAAACTGAAAAAGGAAACACAAGCTAATACTGG + 56277 0 X_100000_Hum1.bam @HWI-18280265/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
238 ACACCATCCTGCTGACGTCACGCACGAAAATCCTCTCTCC AAGACCGCAGAAACTGAAAAAGGAAACACAAGCTAATACTGGGAA + 56363 0 X_100000_Hum1.bam @HWI-12051947/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
239 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
240 30 D 1 NT 0 "" ChrID X BP 56655 56657 BP_range 56655 56658 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 38 38 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
241 CAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCCCCAGAtTAGCTATTACCTGAAAAACAAAAAATTAATGCAACTATATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAAC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
242 AAGCTGCGGCATCATAACTACAATGGCCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCTGCAGA TAGCTATT - 56783 0 X_100000_Hum1.bam @HWI-25997372/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
243 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
244 31 D 1 NT 0 "" ChrID X BP 56675 56677 BP_range 56675 56682 Supports 2 2 + 2 2 - 0 0 S1 3 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 34 34 2 2 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
245 TGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCCCCAGATTAGCTATTACCTGAAAAACaAAAAATTAATGCAACTATATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTAC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
246 AAAAACAAATATAATACTTACCTGCAGATTAGCTATTGCCTGAAAAAC AAAAGTTAATGCAACTATATAAACAAATAAAAACAAATATA + 56627 0 X_100000_Hum1.bam @HWI-18079907/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
247 CAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCTGCAGATTAGCTATTGCCTGAAAAAC AAAAGTTAATGCAACTATATAAACAA + 56576 0 X_100000_Hum1.bam @HWI-40053860/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
248 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
249 32 D 1 NT 0 "" ChrID X BP 56693 56695 BP_range 56693 56695 Supports 6 6 + 1 1 - 5 5 S1 12 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 31 31 1 1 5 5
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
250 ACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCCCCAGATTAGCTATTACCTGAAAAACAAAAAATTAATGCAACTAtATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTACCTATCTCTAACTTTACAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
251 TAATGCAACTA ATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTACCTATCTCT - 56923 0 X_100000_Hum1.bam @HWI-36573009/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
252 TAATGCAACTA ATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTACCTATCTCT - 56923 0 X_100000_Hum1.bam @HWI-35648576/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
253 TAATGCAACTA ATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTACCTATCTCT - 56923 0 X_100000_Hum1.bam @HWI-34360521/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
254 TAATGCAACTA ATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTACCTATCTCT - 56923 0 X_100000_Hum1.bam @HWI-5429922/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
255 CCCAGATTAGCTATTACCTGAAAAACAAAAAATTAATGCAACTA ATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAA - 56814 0 X_100000_Hum1.bam @HWI-44003598/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
256 CTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCCCCAGATTAGCTATTACCTGAAAAACAAAAAATTAATGCAACTA ATAAACAAATAAAAAC + 56514 0 X_100000_Hum1.bam @HWI-20779381/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
257 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
258 33 D 1 NT 0 "" ChrID X BP 61453 61455 BP_range 61453 61460 Supports 2 2 + 1 1 - 1 1 S1 4 SUM_MS 120 1 NumSupSamples 1 1 X_100000_Hum1.bam 82 82 1 1 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
259 GGAGCCTAATTTATTGGAAAAATAAATCAATTATATGTTGGCACAAAAATGTAAACACACACTCACCTAAACGCACCCGGACGAACAAGCCTATGACAACGCACTCCAGCTGATCTGTAAGAAACaAAAAATATGAATAGATAGATCGATATGAAAAGGATAAGTGCGGCAGAAACATGATGAGCAAAAGGCGACTCGCTGCAGCAACTTATGCACAACGTCACTTACCTGAAATTTCTTGCCGTACGAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
260 CACAAAAATGTAAACACACACTCACCTAAACGCACCCGGACGAACAAGCCTATGACAACGCACTCCAGCTGATCTGTAAGAAAC AAAAATATGAATAGATAGATCGATATGAAAAGGATAAG + 61347 60 X_100000_Hum1.bam @HWI-22871936/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
261 AAATAAATCAATTATATGTTGGCACAAAAATGTAAACACACACTCACCTAAACGCACCCGGACGAACAAGCCTATGACAACGCACTCCAGCTGATCTGTAAGAAAC AAAAATATGAATAGATAGA - 61490 60 X_100000_Hum1.bam @HWI-22871936/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
262 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
263 34 D 1 NT 0 "" ChrID X BP 61688 61690 BP_range 61688 61690 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 60 1 NumSupSamples 1 1 X_100000_Hum1.bam 99 99 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
264 TTCTTGCCGTACGATCTCCTGTAGTATCCCTTATCACAGCTGCAATCTACTTGCAATGCTGCACTGCAATAAACGTACTACAAAAGCTGCATACGTTTTGATCAGGACACCTCGTGCGGAGCTGCtAAAAAATTTCCTTCCTGCTGCTCTTATCGACGCTAAAACCTTAAAACCTACAAACAAAACAATTAAATAATAACAAATCAAATAAGACAACCAAATAATACACTTACCTCATTGACTGCAGCTA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
265 AAACGTACTACAAAAGCTGCATACGTTTTGATCAGGACACCTCGTGCGGAGCTGC AAAAAATTTCCTTCCTGCTGCTCTTATTGACGCTAAAACCTTAAAACCTACAAACAAAACAATTAAATAA + 61498 60 X_100000_Hum1.bam @HWI-20953292/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
266 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
267 35 D 15 NT 0 "" ChrID X BP 62741 62757 BP_range 62741 62768 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 45 37 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
268 TTATTTAAACAAAAATACTTATCTAATTGCCAATTCGACGACTCCAAATCCGCGGCACACCGGCGGCGATGGCCCATAAATAAAGGGCCTCCCAATTAATTACAAAATGTACCTGAAAAACATAAaatta<5>accatAATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACCAAAAAAAAAAATTAATGCAATAAATAAATCAAATA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
269 CGACTCCAAATCCGCGGCACACCGGCGGCGATGGCCCATAAATAAAGGGCCTCCTAATTAATTACAAAATGTACCTGAAAAACATAA AATTAACGCAACT + 62390 0 X_100000_Hum1.bam @HWI-470784/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
270 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
271 36 D 1 NT 0 "" ChrID X BP 62833 62835 BP_range 62833 62845 Supports 3 3 + 2 2 - 1 1 S1 6 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 3 3 2 2 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
272 CAATTAATTACAAAATGTACCTGAAAAACATAAAATTAACGCAACCATAATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACCaAAAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAACAAATAACAAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
273 AAACGTACCTGAAAAACAAAACC AAAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCT + 62697 0 X_100000_Hum1.bam @HWI-44395624/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
274 TACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCT + 62697 0 X_100000_Hum1.bam @HWI-5928132/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
275 CATAAAATTAACGCAACCATAATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAAATTAATGCAATAAATAAAT - 62993 0 X_100000_Hum1.bam @HWI-5781178/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
276 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
277 37 D 2 NT 0 "" ChrID X BP 62833 62836 BP_range 62833 62845 Supports 40 40 + 25 25 - 15 15 S1 416 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 3 4 25 25 15 15
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
278 CAATTAATTACAAAATGTACCTGAAAAACATAAAATTAACGCAACCATAATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACCaaAAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAACAAATAACAAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
279 ACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAACAAATAACAA + 62647 0 X_100000_Hum1.bam @HWI-10008010/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
280 AACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAACAAATAACA - 63322 0 X_100000_Hum1.bam @HWI-25092436/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
281 AACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAACAAATAACA + 62835 0 X_100000_Hum1.bam @HWI-17105227/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
282 AAAACC AAAAAAAAATTAATGAAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAACAAATAA + 62731 0 X_100000_Hum1.bam @HWI-29225999/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
283 AACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAACAAA + 62704 0 X_100000_Hum1.bam @HWI-40460429/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
284 AACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAACAAA + 62704 0 X_100000_Hum1.bam @HWI-39353076/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
285 AACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACCTAATCTAATACAATCTCAAAAACAAA + 62704 0 X_100000_Hum1.bam @HWI-34951432/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
286 AACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAACAAA + 62704 0 X_100000_Hum1.bam @HWI-17468574/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
287 AACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAACAAA + 62704 0 X_100000_Hum1.bam @HWI-8655993/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
288 AAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGT + 62697 0 X_100000_Hum1.bam @HWI-25854412/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
289 GAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAA - 62959 0 X_100000_Hum1.bam @HWI-26758274/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
290 GAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAAT + 62754 0 X_100000_Hum1.bam @HWI-46564463/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
291 GAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAA + 62704 0 X_100000_Hum1.bam @HWI-41480828/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
292 CTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAA - 63114 0 X_100000_Hum1.bam @HWI-17688162/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
293 CTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAA + 62818 0 X_100000_Hum1.bam @HWI-5339682/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
294 ACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATAC + 62722 0 X_100000_Hum1.bam @HWI-7467936/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
295 AAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAA - 62986 0 X_100000_Hum1.bam @HWI-34529022/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
296 AAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAA - 62986 0 X_100000_Hum1.bam @HWI-22009451/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
297 AAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAA - 62986 0 X_100000_Hum1.bam @HWI-8693605/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
298 AAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAA - 62986 0 X_100000_Hum1.bam @HWI-4727187/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
299 CCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAA + 62704 0 X_100000_Hum1.bam @HWI-29014266/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
300 CTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAAT - 63100 0 X_100000_Hum1.bam @HWI-12622785/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
301 ACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATA + 62785 0 X_100000_Hum1.bam @HWI-2670943/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
302 TACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAAGTAATGCAATAAAT + 62704 0 X_100000_Hum1.bam @HWI-39211861/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
303 CTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAAC - 62968 0 X_100000_Hum1.bam @HWI-36468090/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
304 CAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGT + 62486 0 X_100000_Hum1.bam @HWI-37972779/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
305 ACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATG - 62923 0 X_100000_Hum1.bam @HWI-2670943/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
306 AAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAAT + 62560 0 X_100000_Hum1.bam @HWI-17065055/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
307 ATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCT + 62774 0 X_100000_Hum1.bam @HWI-14979301/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
308 AATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCA + 62544 0 X_100000_Hum1.bam @HWI-43075969/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
309 AATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCA + 62544 0 X_100000_Hum1.bam @HWI-4088926/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
310 AATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATAC + 62618 0 X_100000_Hum1.bam @HWI-40447350/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
311 AATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATGAATAAATCAAATAAATACAAACATAATA + 62567 0 X_100000_Hum1.bam @HWI-38477368/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
312 AATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATA + 62567 0 X_100000_Hum1.bam @HWI-32747312/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
313 TAATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAAT + 62755 0 X_100000_Hum1.bam @HWI-19113520/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
314 ATAATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAA - 62935 0 X_100000_Hum1.bam @HWI-46564463/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
315 ACGCAACTATAATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAATAAATCAAATAAATAC - 62994 0 X_100000_Hum1.bam @HWI-28271874/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
316 AAAAACATAAAATTAACGCAACTATAATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGCAATAAAT - 62954 0 X_100000_Hum1.bam @HWI-27683315/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
317 AAAAACATAAAATTAACGCAACTATAATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAATGAAATAAAT - 62950 0 X_100000_Hum1.bam @HWI-29225999/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
318 ATGTACCTGAAAAACATAAAATTAACGCAACTATAATTAACGCAATTAATAAATCAAATAAATACAAGTATAATACTTACCTCCAAGCAAACGTACCTGAAAAACAAAACC AAAAAAAAATTAAT - 62869 0 X_100000_Hum1.bam @HWI-7467936/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
319 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
320 38 D 3 NT 0 "" ChrID X BP 65772 65776 BP_range 65772 65780 Supports 2 2 + 0 0 - 2 2 S1 3 SUM_MS 6 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 0 0 2 2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
321 GTGGATGCGGAACAGAATTTTATTCTGTCTCCGTACCTCCACCAGCAAAGTTAAAAAGGCAAAATAAATTGTGGATGCGGAACAGAATTCATTCTGTCTCCGTACCTCCACCAGCAAAGTTAAAAaccACCAGCAAAGTTAAAAAAATAATAAATAAAATAAAATTAAATAATTTAAACAAATAATAACAAATAATAAATAAATAATAAATTAAATAAATATTTAATAAAATAATCCGCGCTTTCCCTTG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
322 AGTTAAAC ACCAGCAAAGTTAAAAAGTTAATAAATAAAATAAAATTAAATAATTTAAACAAATAATAACAAATAATAAATAAATAATAAATTAAATAAATATTTAATAAAATAATCCGCGCTTTC - 66095 3 X_100000_Hum1.bam @HWI-46027927/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
323 AGTTAAAC ACCAGCAAAGTTAAAAAGTTAATAAATAAAATAAAATTAAATAATTTAAACAAATAATAACAAATAATAAATAAATAATAAATTAAATAAATATTTAATAAAATAATCCGCGCTTTC - 66095 3 X_100000_Hum1.bam @HWI-43807848/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
324 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
325 39 D 93 NT 0 "" ChrID X BP 66542 66636 BP_range 66542 66637 Supports 14 14 + 4 4 - 10 10 S1 55 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 19 19 4 4 10 10
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
326 AAGAAAATCCATAGAGACGAAAAGAAGAAAGTCGACCGCAACCAGGAAGAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAGggtat<83>acgaaGAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGACAATTCTCAGAATAATACAACCATTATT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
327 CAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGACAATTCTCAGAATAATACAACCATTATT - 66760 0 X_100000_Hum1.bam @HWI-37726796/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
328 CAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGACAATTCTCAGAATAATACAACCATTATT - 66760 0 X_100000_Hum1.bam @HWI-35405969/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
329 CAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGACAATTCTCAGAATAATACAACCATTATT - 66760 0 X_100000_Hum1.bam @HWI-15011723/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
330 ACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGACAATTCT + 66635 0 X_100000_Hum1.bam @HWI-27265562/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
331 AAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGA - 66760 0 X_100000_Hum1.bam @HWI-34930000/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
332 AAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGA - 66760 0 X_100000_Hum1.bam @HWI-9781965/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
333 AAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCAGA - 66760 0 X_100000_Hum1.bam @HWI-4835601/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
334 AGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATCA - 66760 0 X_100000_Hum1.bam @HWI-27265562/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
335 AAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATC - 66760 0 X_100000_Hum1.bam @HWI-26838202/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
336 AAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATCGCCCATGTCCCACGAATC - 66760 0 X_100000_Hum1.bam @HWI-2200623/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
337 AAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCCTCCCCATTCTACCTTAATATATC - 66604 0 X_100000_Hum1.bam @HWI-19416873/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
338 AACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCC + 66635 0 X_100000_Hum1.bam @HWI-45322524/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
339 AACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCC + 66635 0 X_100000_Hum1.bam @HWI-31621137/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
340 AACCAGGAAAAGTTAAAAGGAGGAAAGGAGAAAGCCTAATAAAGAAGACGAACTAAACTAAAGGAGACGCCACAAACAAAAGCCAG GAAATACATTCAATTTCTTCAAGCCCAGAACGGCGATCC + 66456 0 X_100000_Hum1.bam @HWI-19208770/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
341 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
342 40 D 1 NT 0 "" ChrID X BP 76327 76329 BP_range 76327 76329 Supports 6 6 + 6 6 - 0 0 S1 7 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 65 65 6 6 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
343 TTCGACGAGCGCCTACAGCGAATTGCCGCTAAAACCTAAAAACAAAAAATTTATTAACAAATGAAATACAAATATACAAAATTCAAATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTGcACGCAACACATCCATATCCAACATAACAGACAAGAGGAGACGGGCCCTCAAACGTAAAACAATATCGCCAACTTTGCGCTTACAAACACAAAAAAATTTACAATTTTATGATGCCGTCTCCTCT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
344 ATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTG ACGCAACACATCCATATCCA + 76190 0 X_100000_Hum1.bam @HWI-35097117/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
345 ATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTG ACGCAACACATCCATATCCA + 76190 0 X_100000_Hum1.bam @HWI-32493598/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
346 ATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTG ACGCAACACATCCATATCCA + 76190 0 X_100000_Hum1.bam @HWI-23470581/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
347 ATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTG ACGCAACACATCCATATCCA + 76190 0 X_100000_Hum1.bam @HWI-22426531/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
348 ATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTG ACGCAACACATCCATATCCA + 76190 0 X_100000_Hum1.bam @HWI-3762767/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
349 CAAATGAAATACAAATATACAAAATTCAAATAAAACAAAGCACTTACCTCACTGACCGCATCCAACTG ACGCAACACATCCATATCCAACATAACAGACAAGAGGAGACGGGCCCTCAAACGTAA + 76259 0 X_100000_Hum1.bam @HWI-20565367/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
350 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
351 41 D 1 NT 0 "" ChrID X BP 77385 77387 BP_range 77385 77393 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
352 AAATTAGCTGACGATAAATTACAACACCATCCTGCTGACGTCACGCACGAAAATTCTCTCTCCTAAAACACGGGATCCCAGCGGCGATGTCCTTAACTTTAGCTGCTACAAATGTACCTGAAAACaAAAAAACAAAAATTAATTCAATTATAAAAACAAACATAATACTTACCTCCAGACTATTTTTCCTCCCGAAAAACATACCTGGAAAACAAAAACAAGGCAACTATATAAACAAATAAATACATAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
353 CCTTAACTTTAGCTGCTACAAATGTACCTGAAAAC AAAAAACAAAAATTAATTCAATTATAAAAACAAACATAATACTTACCTCCAGACTATTTTTCCTCCCGAAAAACATACCTGGAAAACAAA - 77492 0 X_100000_Hum1.bam @HWI-2188462/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
354 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
355 42 D 327 NT 0 "" ChrID X BP 77878 78206 BP_range 77878 78212 Supports 14 14 + 5 5 - 9 9 S1 60 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 7 13 5 5 9 9
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
356 ATTTGCAACACCATCCCGCTGACGTCACGCACGAAAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATtgcca<317>taaacTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
357 ATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAA - 78326 0 X_100000_Hum1.bam @HWI-3121927/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
358 ATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAA - 78326 0 X_100000_Hum1.bam @HWI-7400269/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
359 TATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATG - 78430 0 X_100000_Hum1.bam @HWI-35492663/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
360 TATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATG - 78430 0 X_100000_Hum1.bam @HWI-16245213/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
361 CTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGA - 78414 0 X_100000_Hum1.bam @HWI-2954969/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
362 ACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAAC - 78288 0 X_100000_Hum1.bam @HWI-463451/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
363 ACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCATAAAATGTACC - 78551 0 X_100000_Hum1.bam @HWI-39961997/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
364 AAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCA - 78441 0 X_100000_Hum1.bam @HWI-41051007/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
365 ACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACT - 78351 0 X_100000_Hum1.bam @HWI-26786605/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
366 GCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCA + 77621 0 X_100000_Hum1.bam @HWI-13668439/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
367 AGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCC + 77771 0 X_100000_Hum1.bam @HWI-842663/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
368 CTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAAC + 77727 0 X_100000_Hum1.bam @HWI-39610965/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
369 CTGACGTCACGCACGAAAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTGACGACTTC + 77719 0 X_100000_Hum1.bam @HWI-21845915/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
370 CCATCCCGCTGACGTCACGCACGAAAATCCTTTCTCCAAGAGCGCAAAAACTGAAAAAAGAAACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAAT TGCCAAATTG + 77762 0 X_100000_Hum1.bam @HWI-653774/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
371 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
372 43 D 1 NT 0 "" ChrID X BP 78127 78129 BP_range 78127 78129 Supports 2 2 + 2 2 - 0 0 S1 3 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 9 9 2 2 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
373 ACAAATAAGAATGCGACTCAAAATTAAGAAATAACACACAAAAAATAACAAACCTGACAGGCAAACTAGCAGATGCTAATTTGCAACACCATCATGCTGACGTCACGCACGAAAATCCTTTCTCCtAAGACCGCAAAAGCTGAAAAAGGAAACACAAGCTAATACTGGGAAATATATATTTTTAACAAAATACTTATCTAAACTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
374 ACACCATCCTGCTGACGTCACGCACGAAAATCCTCTCTCC AAGACCGCAGAAACTGAAAAAGGAAACACAAGCTAATACTGG + 77955 0 X_100000_Hum1.bam @HWI-34835809/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
375 ACACCATCCTGCTGACGTCACGCACGAAAATCCTCTCTCC AAGACCGCAGAAACTGAAAAAGGAAACACAAGCTAATACTGGGAA + 78041 0 X_100000_Hum1.bam @HWI-7685870/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
376 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
377 44 D 1 NT 0 "" ChrID X BP 78353 78355 BP_range 78353 78360 Supports 4 4 + 0 0 - 4 4 S1 5 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 36 36 0 0 4 4
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
378 TGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCCCCAGATTAGCTATTACCTGAAAAACaAAAAATTAATGCAACTATATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTAC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
379 AAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCTGCAGATTAGCTATTGCCTGAAAAAC AAAAGTTAATGCAACTATATAAACAAATAAAAACAAATAT - 78410 0 X_100000_Hum1.bam @HWI-21995749/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
380 CAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCTGCAGATTAGCTATTGCCTGAAAAAC AAAAGTTAATGCAACTATATAAACAA - 78661 0 X_100000_Hum1.bam @HWI-40053860/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
381 TCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCTGCAGATTAGCTATTGCCTGAAAAAC AAAAGTTAATGCAACTATATAAAC - 78419 0 X_100000_Hum1.bam @HWI-30550473/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
382 TCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCTGCAGATTAGCTATTGCCTGAAAAAC AAAAGTTAATGCAACTATATAAAC - 78419 0 X_100000_Hum1.bam @HWI-6472539/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
383 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
384 45 D 1 NT 0 "" ChrID X BP 78371 78373 BP_range 78371 78373 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 41 41 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
385 ACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAAAACAAATATAATACTTACCCCCAGATTAGCTATTACCTGAAAAACAAAAAATTAATGCAACTAtATAAACAAATAAAAACAAATATACTTACCATCAAACTATCCATCACATTGTACCTGAAAACAAAAACAAATGCAATCATAAAAAACAATCCTAATGCAATACTTACCTATCTCTAACTTTACAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
386 AAAAACAAAAAATTAATGCAACTA ATAAACAAATAAAAAC + 78192 0 X_100000_Hum1.bam @HWI-24131739/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
387 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
388 46 D 1 NT 0 "" ChrID X BP 79188 79190 BP_range 79188 79190 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 5 1 NumSupSamples 1 1 X_100000_Hum1.bam 3 3 0 0 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
389 TTCTATAAAATCATTTCAATTGTAAATTGTAAACATACCATACAATATGATAATGTTACCTGTCCTAATTACTGTCAAAAGCCTAAGTCTACAAAATACTAACTACTTTTACATTATTACTAACTaTGTCCAACCCCCAAACTCACCACATGTAATGTTACATTCAAAAATGCAAATTATTGTACCTATATATTACAAACTCTGTAATCAAAGGCAAAATAAATTGTGGATGCGGAACAGAATTTATTCT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
390 CTACAAAATACTAACTACTTTTATATTAATACTAACT TGTCCAACCCCCAAACTCACCACATGTAATGCTATATTCAAAAATGCAAAT - 79489 5 X_100000_Hum1.bam @HWI-44861908/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
391 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
392 47 D 3 NT 0 "" ChrID X BP 79431 79435 BP_range 79431 79435 Supports 6 6 + 6 6 - 0 0 S1 7 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 6 6 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
393 TTATTCTGTCTCCGTACCTCCACCAGCAAAGTTAAATCTCCGTACCTCCACCAGCAAAGTTAAAAAAAATAAATTGTGGATGCGGAACAGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGTtaaAAAAAACCAGCAAAGTTAAAAACTCCACCAGCAAAGTTAAAAAAAGTTAAAAAAAACAAAGTTAAAATAAACAAAATAAAATAAATTAAACAATTAAATTAAATAAAATAAATTAAACAAAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
394 AACAGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGT AAAAAACCAGCAAAGTTAAAAA + 79391 0 X_100000_Hum1.bam @HWI-30064472/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
395 AACAGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGT AAAAAACCAGCAAAGTTAAAAA + 79391 0 X_100000_Hum1.bam @HWI-18608667/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
396 AACAGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGT AAAAAACCAGCAAAGTTAAAAA + 79391 0 X_100000_Hum1.bam @HWI-12954838/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
397 AACAGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGT AAAAAACCAGCAAAGTTAAAAA + 79391 0 X_100000_Hum1.bam @HWI-8393873/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
398 AACAGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGT AAAAAACCAGCAAAGTTAAAAA + 79391 0 X_100000_Hum1.bam @HWI-1887220/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
399 ATCGTGGATGCGGAACAGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGT AAAAAACCAGCAAAGTTAAAAA + 79378 0 X_100000_Hum1.bam @HWI-20499038/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
400 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
401 48 D 22 NT 0 "" ChrID X BP 81361 81384 BP_range 81361 81385 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 12 15 1 1 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
402 CTTCCTTACGCTCTTCTGCTCAGGTTGATTCAAATTTAAATCCCAACACTAGCGCCATGCCCACTGTGGGGAATTTACCAGCAGCCCGCACACTTAGCCGGCCTGCTGCAAAGCGGGATTTATTTaattc<12>cccaaACGAGCATCCTATGAGTTTTTCGGAAGTGGTAGCTGGAACAGGTCCAGTTTCTGTGGCACCCTCTAATCCGGCACCACTGACGAAAACTCCAGGCAAGAGGACAAATGGCG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
403 CTTAGCCGACCTGCTGCAAAGCGGGATTTATTT ACGAGCACCCTATGAGTTTTTCGGAAGTGGTAGCTGGAGCAGGTCCAGTTTCTGTGGCACCCTCTAACCCGGCACCACTGACGAAAACTCCA + 81328 0 X_100000_Hum1.bam @HWI-46562622/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
404 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
405 49 D 6328 NT 0 "" ChrID X BP 82600 88929 BP_range 82600 88979 Supports 2 2 + 2 2 - 0 0 S1 3 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 20 7 2 2 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
406 ACAAAATAAGAACATTCAAGGACGCAACAAATAACTATTATAGACGTCAAGGCCCCCCTCCACACAATAACACCCCTCGGCTGCCACATAGCTCAGCAATCCTGAGCAAATCAATCGCTGCAGCTcgcca<6318>cagcgCGCCAGGAGGCCGCCAGAAAGTCGATGCTAAATCCTTATTGGCAAAACTCGAACGACAGAAAGCCACGCTTCTCCTCCCATGACATGGCCATTCAGAAAAGACTGAATA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
407 CAATAACACCCCTAGGATGCCACATAGCTCAGCAATCCTGAGCAAATCAATCGCTGCAGCT CGCCAGGAGGCCGCCAGAAAGTCGATGCTAAATCCTTATTGGCAAAACTCGAACGACAGAAAGC + 82487 0 X_100000_Hum1.bam @HWI-7835488/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
408 AACATTCAAGGACGCAACAAATAACTATTATGGACGTCAAGGCCCCCCTCCACACAATAACACCCCTAGGATGCCACATAGCTCAGCAATCCTGAGCAAATCAATCGCTGCAGCT CGCCAGGAGG + 82365 0 X_100000_Hum1.bam @HWI-37376097/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
409 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
410 50 D 6328 NT 0 "" ChrID X BP 82859 89188 BP_range 82859 89634 Supports 8 8 + 8 8 - 0 0 S1 9 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 7 7 8 8 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
411 ACCCAAAAAGGGTAGGATAGCTTCAAAGGACAACGCAAAGCCACGACCGGTATCCAAGACAAGCAACCCAGCGCAAAAACATCTGGAAAACTACCAGGACATGCTCCAAAAAGAAAGGAGTGAATtaaat<6318>tgaacTAAATGACCAGGAACCTAAAAAAGGTACCACAAATCCCATGCGAGTCGGCAAAGATAGCCCTCCGACCACTAGCAGAGCCGCCAGAGCTAGCTTCAAGCCAAGAATCAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
412 CTACCAGGACATGCTCCAAAAGGAAAGGAGTGAAT TAAATGACCAGGAACCTAAAAAAGGTACTCCAAATCCCATGCGAGTCGGCAAAGATAGCCCTCCGACCACTAGCAGAGCCGCCAGAGCTA + 82824 0 X_100000_Hum1.bam @HWI-37312683/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
413 CTACCAGGACATGCTCCAAAAGGAAAGGAGTGAAT TAAATGACCAGGAACCTAAAAAAGGTACTCCAAATCCCATGCGAGTCGGCAAAGATAGCCCTCCGACCACTAGCAGAGCCGCCAGAGCTA + 82824 0 X_100000_Hum1.bam @HWI-24262287/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
414 CTACCAGGACATGCTCCAAAAGGAAAGGAGTGAAT TAAATGACCAGGAACCTAAAAAAGGTACTCCAAATCCCATGCGAGTCGGCAAAGATAGCCCTCCGACCACTAGCAGAGCCGCCAGAGCTA + 82824 0 X_100000_Hum1.bam @HWI-2131350/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
415 CAAAAACATCTGGAAAACTACCAGGACATGCTCCAAAAGGAAAGGAGTGAAT TAAATGACCAGGAACCTAAAAAAGGTACTCCAAATCCCATGCGAGTCGGCAAAGATAGCCCTCCGACCACTAG + 82807 0 X_100000_Hum1.bam @HWI-3458143/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
416 AACGCAAAGCCACGACCGGTATGCAAGACAAGCAATCCAGCGCAAAAACATCTGGAAAACTACCAGGACATGCTCCAAAAGGAAAGGAGTGAAT TAAATGACCAGGAACCTAAAAAAGGTAC + 82494 0 X_100000_Hum1.bam @HWI-37755496/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
417 AGGACAACGCAAAGCCACGATCGGTATCCAAGACAAGCAATCCAGCGCAAAAACATCTGGAAAACTACCAGGACATGCTCCAAAAGGAAAGGAGTGAAT TAAATGACCAGGAACCTAAAAAAGGT + 82708 0 X_100000_Hum1.bam @HWI-38785446/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
418 GATAGCTTCAAAGGACAACGCAAAGCCACGATCGGTATCCAAGACAAGCAATCCAGCGCAAAAACATCTGGAAAACTACCAGGACATGCTCCAAAAGGAAAGGAGTGAAT TAAATGACCAGGAAC + 82749 0 X_100000_Hum1.bam @HWI-20101979/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
419 AGGATAGCTTCAAAGGACAACGCAAAGCCACGACCGGTATGCAAGACAAGCAATCCAGCGCAAAAACATCTGGAAAACTACCAGGACATGCTCCAAAAGGAAAGGAGTGAAT TAAATGACCAGGA + 82747 0 X_100000_Hum1.bam @HWI-13493992/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
420 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
421 51 D 6376 NT 0 "" ChrID X BP 84479 90856 BP_range 84479 90856 Supports 15 15 + 10 10 - 5 5 S1 66 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 18 8 10 10 5 5
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
422 AATACTCACCCCAGACTAGCTCCCTCCAAACGTACCTGAAAAACAAAATCAAAATTAAATCAAACATAAAAACAAATAAATAATAAAATAATACTTACCTCAAAACTACCTCTCACCAAATGCACctgaa<6366>aaataACTAATGTAATACTTACCTAATTATAACTTTACATTTATTTCATGCCCGTATCGTTGCGGCGGTCCTTGGCAACAAATCCCGGTCCGGCGGCTCCAAGCTGCCAATCCT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
423 CTCACCAAATGCAC ACTAATGTAATACTTACCTAATTATAACTTTACATTTATTTCATGCCCGTATCGTTGCG + 84379 0 X_100000_Hum1.bam @HWI-3102178/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
424 CTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTATAACTTTACATTTATTTCATGCCCGTATCGTTGCGGCGGTCCTTGGCAACAAATCCCGGTCCGGCGGCTCCAAGCTGCCAATCCT - 90994 0 X_100000_Hum1.bam @HWI-3987797/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
425 AAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTATAACTTTACATTTATTTCATGCCCGTATCGTTGCGGCGGTCCTTGGC - 91015 0 X_100000_Hum1.bam @HWI-37520992/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
426 CTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTATAACTTTACATTTATTTCATGCCCGTATCGTTGCGGCGGTCCTTGGCAACAAATCCCGGTCCGGCGGCTCCAAG + 84527 0 X_100000_Hum1.bam @HWI-34806997/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
427 ATACTTACCTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTATAACTTTACATTTATTTCATGCCCGTATCGTTGCGGCGGTCCTTGGCAACAAATCCCGGTCCGGCG - 91114 0 X_100000_Hum1.bam @HWI-37593252/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
428 ATACTTACCTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTATAACTTTACATTTATTTCATGCCCGTATCGTTGCGGCGGTCCTTGGCAACAAATCCCGGTCCGGCG - 91114 0 X_100000_Hum1.bam @HWI-103189/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
429 ATAATAAAATAATACTTACCTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTATAACTTTACATTTATTTCATGCCCGTATCGTTGCGGCGGTCCTTGGCAACAAATC + 84433 0 X_100000_Hum1.bam @HWI-43015590/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
430 TCAAACATAAAAACAAATAAATAATAAAATAATACTTACCTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTATAACTTTACATTTATTTCATGCCCGTATCGTTGCG + 84379 0 X_100000_Hum1.bam @HWI-27052876/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
431 TCAAACATAAAAACAAATAAATAATAAAATAATACTTACCTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTATAACTTTACATTTATTTCATGCCCGTATCGTTGCG + 84379 0 X_100000_Hum1.bam @HWI-21873573/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
432 TCAAACATAAAAACAAATAAATAATAAAATAATACTTACCTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTATAACTTTACATTTATTTCATGCCCGTATCGTTGCG + 84379 0 X_100000_Hum1.bam @HWI-5331471/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
433 CCAAACGTACCTGAAAAACAAAATCAAAATTAAATCAAACATAAAAACAAATAAATAATAAAATAATACTTACCTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTAT - 90818 0 X_100000_Hum1.bam @HWI-28658481/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
434 CCAAACGTACCTGAAAAACAAAATCAAAATTAAATCAAACATAAAAACAAATAAATAATAAAATAATACTTACCTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTAT + 84379 0 X_100000_Hum1.bam @HWI-3102178/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
435 CCAAACGTACCTGAAAAACAAAATCAAAATTAAATCAAACATAAAAACAAATAAATAATAAAATAATACTTACCTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTAT + 84379 0 X_100000_Hum1.bam @HWI-27052876/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
436 CCAAACGTACCTGAAAAACAAAATCAAAATTAAATCAAACATAAAAACAAATAAATAATAAAATAATACTTACCTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTAT + 84379 0 X_100000_Hum1.bam @HWI-21873573/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
437 CCAAACGTACCTGAAAAACAAAATCAAAATTAAATCAAACATAAAAACAAATAAATAATAAAATAATACTTACCTCAAAACTACCTCTCACCAAATGCAC ACTAATGTAATACTTACCTAATTAT + 84379 0 X_100000_Hum1.bam @HWI-5331471/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
438 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
439 52 D 6 NT 0 "" ChrID X BP 85915 85922 BP_range 85915 85925 Supports 3 3 + 0 0 - 3 3 S1 4 SUM_MS 120 1 NumSupSamples 1 1 X_100000_Hum1.bam 1 0 0 0 3 3
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
440 ACCCCACGCAATGTACTCTCAAAAATTTAAATTATTGTACCTACATATTGCATACTATGTAATCAAAGGCAAAATAAATTGTGGATGCGGAACAGAACTCATTCTGTCTCCGTACCTCCACCAGCaaagttAAAATTAACCAGCAAAGTTAAAAACGCGCAAATATAATTTAAATCGCCTTTTCATTTTGACAAATTAAAAGTTTAAATATTGTCTTCCGGCCGCAAAGTTAATACCGCGACAATAAAAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
441 CACCAGC AAAATTAACCAGCAAAGTTAAAAACGCGCAAATATAATTTAAATCGCCTTTTCATTTTGACAAATTAAAAGTTTAAATATTGTCTTCCGGCCGCAAAGTTAATACCGCGACAATAAAA - 86124 40 X_100000_Hum1.bam @HWI-32908418/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
442 CACCAGC AAAATTAACCAGCAAAGTTAAAAACGCGCAAATATAATTTAAATCGCCTTTTCATTTTGACAAATTAAAAGTTTAAATATTGTCTTCCGGTCGCAAAGTTAATACCGCGACAATAAAA - 86124 40 X_100000_Hum1.bam @HWI-18632060/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
443 CACCAGC AAAATTAACCAGCAAAGTTAAAAACGCGCAAATATAATTTAAATCGCCTTTTCATTTTGACAAATTAAAAGTTTAAATATTGTCTTCCGGCCGCAAAGTTAATACCGCGACAATAAAA - 86124 40 X_100000_Hum1.bam @HWI-14761093/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
444 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
445 53 D 22 NT 0 "" ChrID X BP 87689 87712 BP_range 87689 87713 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 4 5 1 1 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
446 CTTCCTTACGCTCTTCTGCTCAGGTTGATTCAAATTTAAATCCCAACACTAGCGCCATGCCCACTGTGGGGAATTTACCAGCAGCCCGCACACTTAGCCGGCCTGCTGCAAAGCGGGATTTATTTaattc<12>cccaaACGAGCATCCTATGAGTTTTTCGGAAGTGGTAGCTGGAACAGGTCCAGTTTCTGTGGCACCCTCTAATCCGGCACCACTGACGAAAACTCCAGGCAAGAGGACAAATGGCG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
447 CTTAGCCGACCTGCTGCAAAGCGGGATTTATTT ACGAGCACCCTATGAGTTTTTCGGAAGTGGTAGCTGGAGCAGGTCCAGTTTCTGTGGCACCCTCTAACCCGGCACCACTGACGAAAACTCCA + 87656 0 X_100000_Hum1.bam @HWI-25913708/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
448 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
449 54 D 1 NT 0 "" ChrID X BP 87894 87896 BP_range 87894 87900 Supports 2 2 + 1 1 - 1 1 S1 4 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 16 16 1 1 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
450 ACCCTCTAATCCGGCACCACTGACGAAAACTCCAGGCAAGAGGACAAATGGCGAACTGGACTCCTCCAGCTTTAAGACTCCCAACAAACGACTATGCGCTACATCAAACTTTAAAACTCCCAGCAtTTTTCCTCCTCTTATCACACCTGTTTTTAAAAGCAAGGCAGCTCAATCTGTTTATGAGGAATCAAAAGCCAGAAATGGACCCCCCCGCCAGCCGTTACCCTGCAGCACCAATGCCTCTGCTCGC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
451 CCCAGCA TTTTCCTCCTCTTATCACACCTGTTTTTAAAAGCAAGGCAGCTCAATCTGTTTATGAGGAATCAAAAGCCAGAAATGGACCCCCCCGCCAGCCGTTACCCTGCAGCACCAATGCCTCT + 87867 0 X_100000_Hum1.bam @HWI-42659987/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
452 CTACATCAAACTTTAAAACTCCCAGCA TTTTCCTCCTCTTATCACACCTGTTTTTAAAAGCAAGGCAGCTCAATCTGTTTATGAGGAATCAAAAGCCAGAAATGGACCCCCCCGCCAGCCGTTAC - 88011 0 X_100000_Hum1.bam @HWI-42659987/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
453 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
454 55 D 3 NT 0 "" ChrID X BP 93955 93959 BP_range 93955 93960 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 25 22 0 0 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
455 AATATGTGACTCCATCCTGCTGACGACACACAAGTAAATCCTTCAACGCAACCGACAACAGGAAACGGGCCTTGCAAAAGCAAAACAAAATCGCCAAATTTTGCGATTATAAACACAAAAAATTGacaATTTTACAATGCCGCCTGCACCTCCTGTTGCCACTGCATCAATAAGGATCAGTAGCGCGGAGCTGATGCCACTTTAAAAAGCTGAAAAATCCGTCCACAAAATGTATACTCTTCCTCAGTAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
456 AATTTTGCGATTATAAACACAAAAAATTG ATTTTACAATGCCGCCTCCACCTCCTGTTGCCACTGCATCAATAAGGATCACTAGCGCGGAGCTGATGCCACTTTAAAAAGCTGAAAAATCCGTCC - 94090 0 X_100000_Hum1.bam @HWI-1245579/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
457 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
458 56 D 5 NT 0 "" ChrID X BP 94014 94020 BP_range 94014 94022 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 24 25 0 0 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
459 AGGAAACGGGCCTTGCAAAAGCAAAACAAAATCGCCAAATTTTGCGATTATAAACACAAAAAATTGACAATTTTACAATGCCGCCTGCACCTCCTGTTGCCACTGCATCAATAAGGATCAGTAGCgcggaGCTGATGCCACTTTAAAAAGCTGAAAAATCCGTCCACAAAATGTATACTCTTCCTCAGTATCATACTGTCAACGAACTTCCACTAACCTGCAATGAAAGGAAAATAAATAAGTATATGAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
460 ACCTCCTGTTGCCACTGCATCAATAAGGATCACTAGC GCTGATGCCACTTTAAAAAGCTGAAAAATCCGTCCACAAAATGTATACTCTTCCTCAGTATCATACTGTCAACGAACTTCCACTAACC - 94204 0 X_100000_Hum1.bam @HWI-22468619/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
461 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
462 57 D 61 NT 0 "" ChrID X BP 94069 94131 BP_range 94069 94131 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 26 30 1 1 0 0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
463 ACAAAAAATTGACAATTTTACAATGCCGCCTGCACCTCCTGTTGCCACTGCATCAATAAGGATCAGTAGCGCGGAGCTGATGCCACTTTAAAAAGCTGAAAAATCCGTCCACAAAATGTATACTCttcct<51>aataaGTATATGATACAAAACAAACAAAGGACAATCTAAAATTAGCAAACCAGACAGGCATACAGGCATACTAGCAGATGCTAATATGCAACTCCATCCTGCTGACGACAACCACG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
464 AATGCCGCCTCCACCTCCTGTTGCCACTGCATCAATAAGGATCACTAGCGCGGAGCTGATGCCACTTTAAAAAGCTGAAAAATCCGTCCACAAAATGTATACTC GTATATGACACAAAACAAACA + 93926 0 X_100000_Hum1.bam @HWI-1245579/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
465 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
466 58 D 1 NT 0 "" ChrID X BP 94593 94595 BP_range 94593 94602 Supports 5 5 + 0 0 - 5 5 S1 6 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 15 15 0 0 5 5
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
467 CACCTTCAGATTAGCTTCCACCTAATGTACCTGAAATACAAAAACAATAATTAACGCAATTAATAAATCAATTAAATACAAGTATAACACTTACCTCCAAGCTAATGTACCTGAAAAACAAAAACaAAAAAAATTAATTCAATAAATAAATCAAATAAATACAAATATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTAAAAAACAAAAAATTTAATACAATCTTAAAAGCAAATAACAAAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
468 ACTTACCTCCAAGCTAATGTACCTGAAAAACAAAAAC AAAAAAATTAATTCAATAAATAAATCAAATAAATACAAATATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTAAAAAACA - 95097 0 X_100000_Hum1.bam @HWI-20075430/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
469 ACCTGAAATACAAAAACAATAATTAACGCAATTAATAAATCAATTAAATACAAGTATAACACTTACCTCCAAGCTAATGTACCTGAAAAACAAAAAC AAAAAAATTAATTCAATAAATAAATCAA - 94724 0 X_100000_Hum1.bam @HWI-34448436/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
470 ACCTGAAATACAAAAACAATAATTAACGCAATTAATAAATCAATTAAATACAAGTATAACACTTACCTCCAAGCTAATGTACCTGAAAAACAAAAAC AAAAAAATTAATTCAATAAATAAATCAA - 94724 0 X_100000_Hum1.bam @HWI-15512287/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
471 ACCTGAAATACAAAAACAATAATTAACGCAATTAATAAATCAATTAAATACAAGTATAACACTTACCTCCAAGCTAATGTACCTGAAAAACAAAAAC AAAAAAATTAATTCAATAAATAAATCAA - 94724 0 X_100000_Hum1.bam @HWI-34232282/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
472 ACCTGAAATACAAAAACAATAATTAACGCAATTAATAAATCAATTAAATACAAGTATAACACTTACCTCCAAGCTAATGTACCTGAAAAACAAAAAC AAAAAAATTAATTCAATAAATAAATCAA - 94724 0 X_100000_Hum1.bam @HWI-24154913/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
473 ####################################################################################################
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
474 59 D 1 NT 0 "" ChrID X BP 95525 95527 BP_range 95525 95527 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 11 11 0 0 1 1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
475 ATTATAAACTAACTCACCACGCCCAACCCCCAAACTCACCCCATGCAATGTTAAACCTATAAATTCAAATAATTGTACCTATATATTGCACATACTGTAATCAAAGGCAAAATAAATCGTGGATGcGGAACAGAATTTACTCTGTCTCCGTACCTCCACCAGCAAAGTTAAAAAAGCAGCGCTGGCCGGACATGCATGTTGCGACGCGCATTCAGCGTCCACAACAAGCCCCAGCCAGAATACAACAAAC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
476 ATAATTGTACCTATATATTGCACATACTGTAATCAAAGGCAAAATAAATCGTGGATG GGAACAGAATTTACTCTGTCTCCGTACCTCCACCAGCAAAG - 95565 0 X_100000_Hum1.bam @HWI-20124521/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
477 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
478 60 D 7 NT 0 "" ChrID X BP 96781 96789 BP_range 96781 96789 Supports 30 30 + 19 19 - 11 11 S1 240 SUM_MS 1062 1 NumSupSamples 1 1 X_100000_Hum1.bam 26 26 19 19 11 11
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
479 CACAAATTAAAAGCCAGGGTATTTATACCAACAAGTATCAAACTTTTATACATTAAGAATCAGCAAACACCATGTCCAACAACCTATTTACTGATTCCTCTTCTGACGACGAGGTACATTTATCGgccatgtCCCACGGATCAGACAATTCTCTGCTTAATAATATCATTATTAATCAAAAGAAATTGCCCTCAAAGACAAATAAAAGTTCAAAAAACTCTTCTGGCGCTGCCATAAAAATTGTTAATTC
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
480 ATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTCTGGTGCTGCCATAAAAATTGTTAATT + 96788 6 X_100000_Hum1.bam @HWI-1728530/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
481 ACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTCTGGTGCTGCCATAAAAATTGTTAA + 96750 43 X_100000_Hum1.bam @HWI-28971924/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
482 GAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTCTGGTGCTGCCATAAAAATT + 96738 43 X_100000_Hum1.bam @HWI-40350610/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
483 GAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTCTGGTGCTGCCATAAAAATT + 96738 43 X_100000_Hum1.bam @HWI-37646907/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
484 GAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTCTGGTGCTGCCATAAAAATT + 96738 43 X_100000_Hum1.bam @HWI-25711382/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
485 GAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTCTGGTGCTGCCATAAAAATT + 96738 43 X_100000_Hum1.bam @HWI-20017185/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
486 GAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTCTGGTGCTGCCATAAAAATT + 96738 43 X_100000_Hum1.bam @HWI-4796567/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
487 GAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTCTGGTGCTGCCATAAAAATT + 96738 43 X_100000_Hum1.bam @HWI-1069628/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
488 GACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTCTGGTGCTGCCATAAAA - 97015 24 X_100000_Hum1.bam @HWI-27641226/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
489 TTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTCTGG - 96889 44 X_100000_Hum1.bam @HWI-28971924/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
490 TGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTC + 96634 24 X_100000_Hum1.bam @HWI-41796236/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
491 TGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTC + 96634 24 X_100000_Hum1.bam @HWI-12440898/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
492 TGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAAAAACTCTTC + 96634 24 X_100000_Hum1.bam @HWI-5878730/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
493 CCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAA - 96884 44 X_100000_Hum1.bam @HWI-40350610/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
494 CCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAA - 96884 44 X_100000_Hum1.bam @HWI-37646907/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
495 CCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAA - 96884 44 X_100000_Hum1.bam @HWI-25711382/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
496 CCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAA - 96884 44 X_100000_Hum1.bam @HWI-20017185/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
497 CCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAA - 96884 44 X_100000_Hum1.bam @HWI-4796567/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
498 CCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAGCCAAATAAAAGTTCAAA - 96884 44 X_100000_Hum1.bam @HWI-1069628/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
499 AACACCATGTCCAACAACCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAG + 96692 40 X_100000_Hum1.bam @HWI-27876204/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
500 AACACCATGTCCAACAACCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAG + 96692 40 X_100000_Hum1.bam @HWI-22209972/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
501 AACACCATGTCCAACAACCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAATCAAAAGAAATTGCCCTCAAAG + 96692 40 X_100000_Hum1.bam @HWI-1569561/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
502 TTTATACATTAAGAATCATTAAACACCATGTCCAACAACCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAAT + 96552 35 X_100000_Hum1.bam @HWI-35296873/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
503 TTTATACATTAAGAATCATTAAACACCATGTCCAACAACCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAAT + 96552 35 X_100000_Hum1.bam @HWI-10065612/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
504 TTTATACATTAAGAATCATTAAACACCATGTCCAACAACCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCATTATTAAT + 96552 35 X_100000_Hum1.bam @HWI-295785/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
505 ATCAAACTTTTATACATTAAGAATCATTAAACACCATGTCCAACAACCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCA - 96839 42 X_100000_Hum1.bam @HWI-27876204/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
506 ATCAAACTTTTATACATTAAGAATCATTAAACACCATGTCCAACAACCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCA - 96839 42 X_100000_Hum1.bam @HWI-22209972/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
507 ATCAAACTTTTATACATTAAGAATCATTAAACACCATGTCCAACAACCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTATCA - 96839 42 X_100000_Hum1.bam @HWI-1569561/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
508 AGTATCAAACTTTTATACATTAAGAATCATTAAACACCATGTCCAACAACCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTA + 96689 0 X_100000_Hum1.bam @HWI-36827803/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
509 AGTATCAAACTTTTATACATTAAGAATCATTAAACACCATGTCCAACAACCTATTTACTGATTCTTCTTCTGACGACGAGGTACATTTATCG CCCACGGATCAGACAATTCTCTGCTTAATACTA + 96689 0 X_100000_Hum1.bam @HWI-26536829/2
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
510 ####################################################################################################
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
511 61 D 1 NT 0 "" ChrID X BP 97934 97936 BP_range 97934 97940 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 19 19 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
512 ACCCCCTAATCCGGCACCACTGACGAAAACCCCAGGAAAGCGGACAAACGACGATCTGGATTGCTCAAATTTTAAGACGCCCAATAAAAAATTATGCGCGACATCCAATTTTGTAACTCCCTGCAtTTTTCCCCCGCTCATCACACCAGTTTTCAAAAGCAAGGCAGCTCAATCTGTTTATGAGGAATCAAAAGCCAGAAACGGACCCACCCGCCAGCCGTTACCCTGTAGCATCAATGTCTCTGCTTGC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
513 TCTGGATTGCTCAAATTTTAAGACGCCCAATAAAAAATTATGCGCGACATCCAATTTTGTAACTCCCTGCA TTTTCCCCCGCTCATCACACCAGTTTTCAAAAGCAAGGCAGCTCAATCTGTTTA + 97714 0 X_100000_Hum1.bam @HWI-18507559/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
514 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
515 62 D 3 NT 2 "TC" ChrID X BP 484 488 BP_range 484 488 Supports 9 9 + 5 5 - 4 4 S1 30 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 19 19 5 5 4 4
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
516 ACTACTGAAACGACTGTATGACATTGACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAGCTGGCCAGGGTGACCCAATTTATTCTAAAAG TTGATGAAAAAGATGTCTGTTCTGCCACATTCCTTGACATTACGGAAGCCTTTGACCGAGTATGGCACGACGGCTTGCTATATAAACTATCCAGACTCATCCCCAGATACCTATTCGACCTACTT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
517 CCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCT + 260 0 X_100000_Hum1.bam @HWI-17867420/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
518 TCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCTGTTCTGCC + 387 0 X_100000_Hum1.bam @HWI-23965898/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
519 TCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCTGTTCTGCC - 736 0 X_100000_Hum1.bam @HWI-2029754/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
520 ACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCTGTTCTG + 385 0 X_100000_Hum1.bam @HWI-38328527/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
521 ACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCTGTTCTG - 539 0 X_100000_Hum1.bam @HWI-38328527/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
522 CATTGACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCTG + 380 0 X_100000_Hum1.bam @HWI-12031808/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
523 CATTGACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCTG - 540 0 X_100000_Hum1.bam @HWI-12031808/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
524 ACATTGACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCT - 623 0 X_100000_Hum1.bam @HWI-43669573/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
525 ACATTGACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCT + 379 0 X_100000_Hum1.bam @HWI-43669573/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
526 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
527 63 D 47 NT 47 "ATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAAT" ChrID X BP 3915 3963 BP_range 3915 3963 Supports 11 11 + 6 6 - 5 5 S1 42 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 6 6 5 5
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
528 CTATTTTTCCTCCCGAAAAACATACCTGGAAAACAAAAACAAGGCAACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAAAAA TTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAAATAGCAAACCTGACAGG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
529 TATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCC + 3896 0 X_100000_Hum1.bam @HWI-9381498/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
530 TATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCC - 4063 0 X_100000_Hum1.bam @HWI-9381498/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
531 AATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAA + 3892 0 X_100000_Hum1.bam @HWI-22544107/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
532 AATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAA - 4193 0 X_100000_Hum1.bam @HWI-22544107/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
533 CCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAA + 3889 0 X_100000_Hum1.bam @HWI-23086971/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
534 CCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTC + 3786 0 X_100000_Hum1.bam @HWI-8544935/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
535 CCACCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAG + 3813 0 X_100000_Hum1.bam @HWI-45525114/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
536 CATTCCACCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCC + 3882 0 X_100000_Hum1.bam @HWI-29236202/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
537 CATTCCACCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCC - 4053 0 X_100000_Hum1.bam @HWI-29236202/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
538 AATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGC - 4108 0 X_100000_Hum1.bam @HWI-24131917/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
539 CAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATT - 4146 0 X_100000_Hum1.bam @HWI-30014670/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
540 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
541 64 D 33 NT 32 "TAAGTAAATAACAAATGTTATACTTACTTAAT" ChrID X BP 3929 3963 BP_range 3929 3963 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
542 GAAAAACATACCTGGAAAACAAAAACAAGGCAACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAAAAATTAGAGAAATCACA TTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAAATAGCAAACCTGACAGG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
543 AAAATTAGAAAAATCACATAAGTAAATAACAAATGTTATACTTACTTAATTTTAATATTACAT - 4179 0 X_100000_Hum1.bam @HWI-15529215/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
544 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
545 65 D 2 NT 1 "T" ChrID X BP 3960 3963 BP_range 3960 3963 Supports 9 9 + 7 7 - 2 2 S1 24 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 7 7 2 2
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
546 AACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAA TTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAAATAGCAAACCTGACAGG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
547 TTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAAATAGCAAA + 3952 0 X_100000_Hum1.bam @HWI-42402525/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
548 GGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAA + 3944 0 X_100000_Hum1.bam @HWI-14862151/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
549 GGTTATACTTACCTAATTTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAA - 4154 0 X_100000_Hum1.bam @HWI-39849104/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
550 AAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAA + 3929 0 X_100000_Hum1.bam @HWI-28996201/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
551 ACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAA + 3926 0 X_100000_Hum1.bam @HWI-27317211/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
552 AGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAA + 3919 0 X_100000_Hum1.bam @HWI-18202504/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
553 ATACAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAAC + 3906 0 X_100000_Hum1.bam @HWI-8715007/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
554 TGTATCTGAGAAATACAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAGATC + 3894 0 X_100000_Hum1.bam @HWI-3468445/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
555 CCTAATGTATCTGAGAAATACAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCATG - 3984 0 X_100000_Hum1.bam @HWI-24912759/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
556 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
557 66 D 3 NT 4 "CTTC" ChrID X BP 4531 4535 BP_range 4531 4535 Supports 5 5 + 5 5 - 0 0 S1 6 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 11 12 5 5 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
558 CTGACAGGCAAACTAGCAGATGCTAATTTGCAACACCATCATGCTGACGTCACGCACGAAAATCCTTTCTCCTAAGACCGCAAAAGCTGAAAAAGGAAACACAAGCTAATACTGGGAAATATATA TTAACAAAATACTTATCTAAACTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
559 CTGGGAAATAAATACTTCTTAACAAAATACTTATCTAAATTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGA + 4517 0 X_100000_Hum1.bam @HWI-22276267/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
560 ACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAG + 4477 0 X_100000_Hum1.bam @HWI-24539072/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
561 GCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAA + 4510 0 X_100000_Hum1.bam @HWI-39075505/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
562 CACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTAC + 4505 0 X_100000_Hum1.bam @HWI-508558/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
563 ACACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTA + 4504 0 X_100000_Hum1.bam @HWI-17057283/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
564 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
565 67 D 48 NT 15 "CGGCAAAGACAAAAG" ChrID X BP 8377 8426 BP_range 8377 8426 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 36 33 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
566 CTTCACCATTCCACACCATGTTCGTGGATAGTTGAGGAACTGCTGAAGCTCGGATTCCATGCGCGCTTCGTCAGAAATATGACGAATCCGGCCACAGGTGGCCCCATGAGAATGTTTGAAGTGGA ACAAATCGGTGGGCAAAGGGTTGATATAGAAAGGAAAAATAGGACACGTGAGCCGGTCCAGTGCTACAGATGCCAGGGCTTCAGGCATTCAAAAAACTCTTGCATGAGGCCGCCAAAATGCATGA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
567 GATAGTTGAGGAACTGCTGAAGCTCGGATTCCATGCGCGCTTCGTCAGAAATATGACGAATTCGGCAACAGGTGGCCCCATGAGAATGTTTGAAGTGGACGGCAAAGACAAAAGACAAATCGGTG + 8278 0 X_100000_Hum1.bam @HWI-44418692/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
568 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
569 68 D 80 NT 69 "TGTTGAAGACGCGGGACTGCCGCGCAATCGTTCTTTCCAACCGGGGGTTCTTTGCGCCTGCGGTCTTTC" ChrID X BP 13406 13487 BP_range 13406 13487 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 1 4 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
570 GGCGAGGCGTCGGAAATCCGATAGCCGGAAGAGAGGCCGGAGCAGCATGTTGGGCATTTTCGCCCCAGTAGCAGCTGCTGGGGCAGCAAGGGCAGAGGTAGCAGTGTCAGCGCTCCTGGTAAACC TGCTTCAGCGGCTCCATCTGCTGTTGCATCTGGCGCTTCTCCAACTTTCCTCCCTGAAAGAAGAGAATATTAGTAGGAGCATGAGACCAACAACAGCCCTAGCTTACCACGTCAGCGGAAACAGC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
571 GTCAGCGCTCCTGGCAAACCTGTTGAAGACGCGGGACTGCCGCGCAATCGTTCTTTCCAACCGGGGGTTCTTTGCGCCTGCGGTCTTTCTGCTTCAGCGGCTCCATCTGCTGTTGCATCTGGCGC + 13386 0 X_100000_Hum1.bam @HWI-5145995/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
572 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
573 69 D 71 NT 70 "CTGTTGAAGACGCGGGACTGCCGCGCAATCGTTCTTTCCAACCGGAGGTTCTTTGCGCCTGCGGTCTTTC" ChrID X BP 13415 13487 BP_range 13415 13487 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 1 4 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
574 TCGGAAATCCGATAGCCGGAAGAGAGGCCGGAGCAGCATGTTGGGCATTTTCGCCCCAGTAGCAGCTGCTGGGGCAGCAAGGGCAGAGGTAGCAGTGTCAGCGCTCCTGGTAAACCGGCCTTTTC TGCTTCAGCGGCTCCATCTGCTGTTGCATCTGGCGCTTCTCCAACTTTCCTCCCTGAAAGAAGAGAATATTAGTAGGAGCATGAGACCAACAACAGCCCTAGCTTACCACGTCAGCGGAAACAGC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
575 CGGCTTTTTCCTGTTGAAGACGCGGGACTGCCGCGCAATCGTTCTTTCCAACCGGAGGTTCTTTGCGCCTGCGGTCTTTCTGCTTCAGCGGCTCCATCTGCTGTTGCATCTGG + 13405 0 X_100000_Hum1.bam @HWI-33589454/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
576 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
577 70 D 3 NT 6 "GCGATT" ChrID X BP 15481 15485 BP_range 15481 15485 Supports 2 2 + 1 1 - 1 1 S1 4 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 1 1 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
578 GCTTGCTGCATACCGGCATCTCCGCATCAGCGACGTTACAAGCACCACTAAAATTAGAAAGAGGCTTACTATAGGCAAAGCGCAGAAAAACAAATATTACAATAAGAAATAGCACGCGATTTTTC TTCGTTTCCGCTTGGTACAAGTGAGACCATTCTCCCTATATGCCATTCTAGTATATTTGCCCGATAAGCGATATGCTGGCGGCAAAAAAAAAAAAAAAGATAATAGCCGATAAGCCCGCCAAAAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
579 AGAGGCTTACTATAGGCAAAGCGCAGAAAAACAAATATTACAATAAGAAATAGCACGCGATTTTTCGCGATTTTCGTTTCCGCTTGGTACAAGTGAGACCATTCTCCCTATATGCCATTCTAGTA + 15415 0 X_100000_Hum1.bam @HWI-9766224/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
580 AGAGGCTTACTATAGGCAAAGCGCAGAAAAACAAATATTACAATAAGAAATAGCACGCGATTTTTCGCGATTTTCGTTTCCGCTTGGTACAAGTGAGACCATTCTCCCTATATGCCATTCTAGTA - 15592 0 X_100000_Hum1.bam @HWI-9766224/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
581 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
582 71 D 5 NT 6 "AGCTGA" ChrID X BP 15869 15875 BP_range 15869 15875 Supports 2 2 + 1 1 - 1 1 S1 4 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 11 12 1 1 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
583 ACAGAGGCGCGCGCGCAACAGTAGCTAAAAGTGAAGCCAGCAGCAACAACAACAACTAATGGACGGCCAGAACGTGAACCAAAGCGGAGGATGGGCATCGGTTTTATCCATCTCATCGGACGATG TGCTCATCCTCGCCGCCATCAGCTATAGTCTCATCGCTGGATACCACGCCAACGTCAAATGAAACCACCATAGTAAGAAGAAGCCTATATCAAACAAATGCCGACATGAAATCTTACGATTTTGA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
584 AACAACAACTAATGGACGGACAGAACGTGAGCCAAAGCGGAGGATGGGCATCGGTTTTATCCATCTCATCGGACGATGAGCTGATGCTCATCCTCGCCGCCATCAGCTATAGTCTCATCGCTGGA + 15791 0 X_100000_Hum1.bam @HWI-45099876/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
585 AACAACAACTAATGGACGGACAGAACGTGAGCCAAAGCGGAGGATGGGCATCGGTTTTATCCATCTCATCGGACGATGAGCTGATGCTCATCCTCGCCGCCATCAGCTATAGTCTCATCGCTGGA - 16008 0 X_100000_Hum1.bam @HWI-45099876/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
586 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
587 72 D 80 NT 69 "TGTTGAAGACGCGGGACTGCCGCGCAATCGTTCTTTCCAACCGGGGGTTCTTTGCGCCTGCGGTCTTTC" ChrID X BP 24553 24634 BP_range 24553 24634 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 3 2 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
588 GGCGAGGCGTCGGAAATCCGATAGCCGGAAGAGAGGCCGGAGCAGCATGTTGGGCATTTTCGCCCCAGTAGCAGCTGCTGGGGCAGCAAGGGCAGAGGTAGCAGTGTCAGCGCTCCTGGTAAACC TGCTTCAGCGGCTCCATCTGCTGTTGCATCTGGCGCTTCTCCAACTTTCCTCCCTGAAAGAAGAGAATATTAGTAGGAGCATGAGACCAACAACAGCCCTAGCTTACCACGTCAGCGGAAACAGC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
589 GTCAGCGCTCCTGGCAAACCTGTTGAAGACGCGGGACTGCCGCGCAATCGTTCTTTCCAACCGGGGGTTCTTTGCGCCTGCGGTCTTTCTGCTTCAGCGGCTCCATCTGCTGTTGCATCTGGCGC + 24533 0 X_100000_Hum1.bam @HWI-6049780/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
590 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
591 73 D 3 NT 6 "GCGATT" ChrID X BP 38134 38138 BP_range 38134 38138 Supports 2 2 + 1 1 - 1 1 S1 4 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 1 1 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
592 GCTTGCTGCATACCGGCATCTCCGCATCAGCGACGTTACAAGCACCACTAAAATTAGAAAGAGGCTTACTATAGGCAAAGCGCAGAAAAACAAATATTACAATAAGAAATAGCACGCGATTTTTC TTCGTTTCCGCTTGGTACAAGTGAGACCATTCTCCCTATATGCCATTCTAGTATATTTGCCCGATAAGCGATATGCTGGCGGCAAAAAAAAAAAAAAAGATAATAGCCGATAAGCCCGCCAAAAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
593 AGAGGCTTACTATAGGCAAAGCGCAGAAAAACAAATATTACAATAAGAAATAGCACGCGATTTTTCGCGATTTTCGTTTCCGCTTGGTACAAGTGAGACCATTCTCCCTATATGCCATTCTAGTA + 38068 0 X_100000_Hum1.bam @HWI-24428995/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
594 AGAGGCTTACTATAGGCAAAGCGCAGAAAAACAAATATTACAATAAGAAATAGCACGCGATTTTTCGCGATTTTCGTTTCCGCTTGGTACAAGTGAGACCATTCTCCCTATATGCCATTCTAGTA - 38251 0 X_100000_Hum1.bam @HWI-24428995/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
595 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
596 74 D 5 NT 6 "AGCTGA" ChrID X BP 39046 39052 BP_range 39046 39052 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 3 3 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
597 AAATATTTAAAAAAAAAAAAAAAAAAAAAAGTGAAGCCAGCAGCAACAACAACAACTAATGGACGGCCAGAACGTGAACCAAAGCGGAGGATGGGCATCGGTTTTATCCATCTCATCGGACGATG TGCTCATCCTCGCCGCCATCAGCTATAGTCTCATCGCTGGATACCACGCCAACGTCAAATGAAACCACCATAGTAAGAAGAAGCCTATATCAAACAAATGCCGACATGAAATCTTACGATTTTGA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
598 GAAGCCAGCAGCAACAACAACAACTAATGGACGGACAGAACGTGAGCCAAAGCGGAGGATGGGCATCGGTTTTATCCATCTCATCGGACGATGAGCTGATGCTCATCCTCGCCGCCATCAGCTAT - 39076 0 X_100000_Hum1.bam @HWI-39320331/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
599 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
600 75 D 19 NT 11 "TAGATGAAGGA" ChrID X BP 43112 43132 BP_range 43112 43132 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 4 4 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
601 CAAAGCTAAACTAAAAGCAGCTGAAAATCGACTAAAAAAAGCGGTAAAGATCTTGAGAGAAAAGAGAATTAATAAACAAATTGAAGGAATAGACACGAAAAACCCGGACAGAATGAGGAAAATGT AAAAAAGACAAACCAACCGAACTTTCCCCTCAAACTGGAAACCAAAAGAGGCCCCAAATGGACAAAAACGATAAAGGAGACAACAGAAGCATTTGTTTCCCACTTAGAAGGAAGATTTAAGCCAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
602 GGACAGAATGAGGAAAATGTTAGATGAAGGAAAAAAAGACA - 43124 0 X_100000_Hum1.bam @HWI-45616874/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
603 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
604 76 D 80 NT 69 "TGTTGAAGACGCGGGACTGCCGCGCAATCGTTCTTTCCAACCGGGGGTTCTTTGCGCCTGCGGTCTTTC" ChrID X BP 47730 47811 BP_range 47730 47811 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 3 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
605 GGCGAGGCGTCGGAAATCCGATAGCCGGAAGAGAGGCCGGAGCAGCATGTTGGGCATTTTCGCCCCAGTAGCAGCTGCTGGGGCAGCAAGGGCAGAGGTAGCAGTGTCAGCGCTCCTGGTAAACC TGCTTCAGCGGCTCCATCTGCTGTTGCATCTGGCGCTTCTCCAACTTTCCTCCCTGAAAGAAGAGAATATTAGTAGGAGCATGAGACCAACAACAGCCCTAGCTTACCACGTCAGCGGAAACAGC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
606 GTCAGCGCTCCTGGCAAACCTGTTGAAGACGCGGGACTGCCGCGCAATCGTTCTTTCCAACCGGGGGTTCTTTGCGCCTGCGGTCTTTCTGCTTCAGCGGCTCCATCTGCTGTTGCATCTGGCGC - 47861 0 X_100000_Hum1.bam @HWI-5145995/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
607 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
608 77 D 92 NT 92 "TCCTCTTATCACACCTGTTTTTAAAAGCAAGGCAGCTCAATCTGTTTATGAGGAATCAAAAGCCAGAAATGGACCCCCCCGCCAGCCGTTAC" ChrID X BP 50934 51027 BP_range 50934 51027 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 24 21 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
609 GTCCCGGCACCTTTAACGAAAACTCCAGGCAAGCGGACAAACGACGATCTGGACTGCTCCAACTTTAAGACGCCCAATAAAAAATTATGCGCGACTTCCAACTTTGTAACTCCCAGCATTTTTCC CCTGCAGCATCAATGCCTCTGCTCGCAGCGCAGCGGCGCCACCCGGGATCGCCCCCCTACCCCCTCATAATACAGATGCAGAGCTGCCTCCATGGAAAATCGTGCCCCAGAGCCGTAGAGCACCT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
610 AACTCCCAGCATTTTTCCTCCTCTTATCACACCTGTTTTTAAAAGCAAGGCAGCTCAATCTGTTTATGAGGAATCAAAAGCCAGAAATGGACCCCCCCGCCAGCCGTTACCCTGCAGCATCAATG + 50815 0 X_100000_Hum1.bam @HWI-41091610/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
611 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
612 78 D 47 NT 47 "ATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAAT" ChrID X BP 55886 55934 BP_range 55886 55934 Supports 8 8 + 3 3 - 5 5 S1 24 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 1 0 3 3 5 5
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
613 CTATTTTTCCTCCCGAAAAACATACCTGGAAAACAAAAACAAGGCAACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAAAAA TTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAAATAGCAAACCTGACAGG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
614 TCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAAT + 55769 0 X_100000_Hum1.bam @HWI-19871417/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
615 ATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAAT - 55988 0 X_100000_Hum1.bam @HWI-37632218/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
616 AATGTATCTGAGAAATACAAAAAATTAGAGAAATCTCAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAA + 55863 0 X_100000_Hum1.bam @HWI-167684/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
617 AATGTATCTGAGAAATACAAAAAATTAGAGAAATCTCAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAA - 56164 0 X_100000_Hum1.bam @HWI-167684/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
618 CCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTC + 55757 0 X_100000_Hum1.bam @HWI-34234489/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
619 CTACATTCCACCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGG - 56048 0 X_100000_Hum1.bam @HWI-36622386/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
620 CATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGT - 56151 0 X_100000_Hum1.bam @HWI-17390279/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
621 AATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGC - 56079 0 X_100000_Hum1.bam @HWI-46241246/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
622 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
623 79 D 2 NT 1 "T" ChrID X BP 55931 55934 BP_range 55931 55934 Supports 4 4 + 4 4 - 0 0 S1 5 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 4 4 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
624 AACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAA TTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAAATAGCAAACCTGACAGG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
625 TACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAAATAGC + 55920 0 X_100000_Hum1.bam @HWI-24687226/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
626 AACAAAGGTTATACTTACCTAATTTTAATATTACATCCGTTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACA + 55909 0 X_100000_Hum1.bam @HWI-17662060/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
627 AGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAA + 55890 0 X_100000_Hum1.bam @HWI-20297375/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
628 ATACAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAAC + 55877 0 X_100000_Hum1.bam @HWI-27539376/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
629 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
630 80 D 3 NT 4 "CTTC" ChrID X BP 56502 56506 BP_range 56502 56506 Supports 3 3 + 3 3 - 0 0 S1 4 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 10 10 3 3 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
631 CTGACAGGCAAACTAGCAGATGCTAATTTGCAACACCATCATGCTGACGTCACGCACGAAAATCCTTTCTCCTAAGACCGCAAAAGCTGAAAAAGGAAACACAAGCTAATACTGGGAAATATATA TTAACAAAATACTTATCTAAACTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
632 CTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGA + 56488 0 X_100000_Hum1.bam @HWI-45325275/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
633 GCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAA + 56481 0 X_100000_Hum1.bam @HWI-1144677/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
634 ACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACC + 56477 0 X_100000_Hum1.bam @HWI-11843196/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
635 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
636 81 D 56 NT 70 "AAAACTCTTGCATGAAGCCACCAAGATGCATGAAATGCGCTGGCGATCACCTATCATCCTGTTGCACCAA" ChrID X BP 60333 60390 BP_range 60333 60390 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 39 27 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
637 CCATGCGAATGTTTGAAGTGGAGATCGTCATGGCCAAAGACGGCAGTCATGACAAAATACTCTCACTCAAACAAATCGGTGGGCAAAGGGTGGACATTGAAAGGAAAAACAGGACACGGGAGCCA GCCAAGATGCATGAAATGCGCTGGCGAACACCTGTCTTCCTGTTGCACCAAACCAAGAACCACCCCCGCCACCTGCGTAAATTGCTCTGGGCAGCATATTAGCGCGTACAAAGGATGCCCTGCAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
638 GTGGGCAAAGGGTGGATATTGAAAGGAAAAACAGGACACGGGAGCCAAAAACTCTTGCATGAAGCCACCAAGATGCATGAAATGCGCTGGCGATCACCTATCATCCTGTTGCACCAAGCCAAGAT - 60333 0 X_100000_Hum1.bam @HWI-42598949/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
639 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
640 82 D 93 NT 94 "CTATCTTAACAATAAATATATCCGATGAAAAGCGTAGTCTGTCTGCTTCCAAATTCCTGCATGTCATCACCTTCCTCGACGGAGCCTAATTTAT" ChrID X BP 61248 61342 BP_range 61248 61342 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 95 75 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
641 CAAGCTTAGCTAATAGAGTCGACAATTTAGAAAAGAAAATTGACATTTTAATGGCCTTAATCATACAAGGAAGAAATAACAATCTTGACATGGATACATCCAATTAATCTTACAACTACTTATAT TTGGAAAAATAAATCAATTATATGTTGGCACAAAAATGTAAACACACACTCACCTAAACGCACCCGGACGAACAAGCCTATGACAACGCACTCCAGCTGATCTGTAAGAAACAAAAAATATGAAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
642 CAACTAATTATATCTATCTTAACAATAAATATATCCGATGAAAAGCGTAGTCTGTCTGCTTCCAAATTCCTGCATGTCATCACCTTCCTCGACGGAGCCTAATTTATTTGGAAAAATAAATCAAT - 61684 0 X_100000_Hum1.bam @HWI-350764/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
643 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
644 83 D 97 NT 5 "AAACC" ChrID X BP 62738 62836 BP_range 62738 62836 Supports 2 2 + 2 2 - 0 0 S1 3 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 47 4 2 2 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
645 TATTTATTTAAACAAAAATACTTATCTAATTGCCAATTCGACGACTCCAAATCCGCGGCACACCGGCGGCGATGGCCCATAAATAAAGGGCCTCCCAATTAATTACAAAATGTACCTGAAAAACA AAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGTACCTGAAAAACATAATCTAATACAATCTCAAAAACAAATAACAAATG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
646 TACCTGAAAAACAAAACCAAAAAAAAATTAATGCAATAAATAAATCAAATAAATACAAACATAATACTTACCTCCAATTTACCTCCCAGCCAATGT + 62486 0 X_100000_Hum1.bam @HWI-29058890/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
647 GTACCTGAAAAACAAAACCAAAAAAAAATTAATGCAATAAATAAATCA + 62544 0 X_100000_Hum1.bam @HWI-36318467/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
648 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
649 84 D 69 NT 69 "TGGCGAACAACGATCTACAATTCCATGACGACTCCTCTGTCACGACGAGACAGAAGACACCACCATAAT" ChrID X BP 63103 63173 BP_range 63103 63173 Supports 2 2 + 1 1 - 1 1 S1 4 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 27 32 1 1 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
650 AATTTTGTATTCATTTCCATGACCCCAACGCTGCAACTGTCCTCGGCAACAATTCCTGTTCCGGCGGCTCCATGCTGCCAATCCTGACGCACTGGCCACAAGACGCGGCGCTGCTGGCAATCTCT GCCAGCAGCTCCAAAACAATACAACGACGGCCGCGCGGAACCCATCTTCAGAATTCCCTCTTCCTGACGACCGGCGAAGCAGTTCTGGAATAAACAATGTATTAATTGCAAACATCTACCGATGA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
651 CTGGCAATCTCTTGGCGAACAACGATCTACAATTCCATGACGACTCCTCTGTCACGACGAGACAGAAGACACCACCATAATGCCAGCAGCTCCAAAGCAATACAACGACGGCCGCGCGGAACCCA + 63091 0 X_100000_Hum1.bam @HWI-35558188/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
652 CTGGCAATCTCTTGGCGAACAACGATCTACAATTCCATGACGACTCCTCTGTCACGACGAGACAGAAGACACCACCATAATGCCAGCAGCTCCAAAGCAATACAACGACGGCCGCGCGGAACCCA - 63256 0 X_100000_Hum1.bam @HWI-35558188/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
653 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
654 85 D 32 NT 9 "TAAAAAAAA" ChrID X BP 63808 63841 BP_range 63808 63841 Supports 2 2 + 1 1 - 1 1 S1 4 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 1 1 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
655 TGCAATGTTAAACCTATAAATTCAAATAATTGTACCTATATATTGCACATACTGTAATCAAAGGCAAAATAAATCGTGGATGCGGAACAGAATTTACTCTGTCTCCGTACCTCCACCAGCAAAGT CAATCTACATACATTGATGCAGCGCAAAAGACGGTCAACCATGTCGTCTCCGAGTCGATCAGGACACCTTGCTGCTCTCAAAAACCTCCAGCCTGACGAGCGCCAACAGCGAGTTGACGCTAAAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
656 CTGTCTCCGTACCTCCACCAGCAAAGTTAAAAAAAACAATCTACATACATTGATGCAGCGCAAAAGACGGTCAACCATGTCGTCTCCGAGTCGATCAGGACACCTTGCTGCTCTCAAAAACCTCC - 63965 0 X_100000_Hum1.bam @HWI-44544144/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
657 GGAACAGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGTTAAAAAAAACAATCTACATACATTGATGCAGCGCAAAAGACGGTCAACCATGTCGTCTCCGAGTCGATCAGGACACCTTGCTG + 63766 0 X_100000_Hum1.bam @HWI-16139812/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
658 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
659 86 D 77 NT 8 "TAAAAAAA" ChrID X BP 63808 63886 BP_range 63808 63886 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 2 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
660 TGCAATGTTAAACCTATAAATTCAAATAATTGTACCTATATATTGCACATACTGTAATCAAAGGCAAAATAAATCGTGGATGCGGAACAGAATTTACTCTGTCTCCGTACCTCCACCAGCAAAGT GTCTCCGAGTCGATCAGGACACCTTGCTGCTCTCAAAAACCTCCAGCCTGACGAGCGCCAACAGCGAGTTGACGCTAAAACCTAAAAACAAACAACAACAAATTAAATACAAACAAATAAAATCA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
661 GTACCTCCACCAGCAAAGTTAAAAAAAGTCTCCGAGTCGATCAGGACACCTTGCTGCTCTCAAAAACCTCCAGCCTGACGAGCGCCAACAGCGAGTTGACGCTAAAACCTAAAA + 63885 0 X_100000_Hum1.bam @HWI-8364547/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
662 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
663 87 D 76 NT 29 "ATTGTTCTTAATATTGCATAGGCACATAC" ChrID X BP 65441 65518 BP_range 65441 65518 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 15 9 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
664 GCAACGTCTCCTGAAGCTTCCTGCGACTCGGTGCTTCCGTCCTTCTGGCGGGGGTACCTGAAAAGAAACAAATTAAGCAATGTTAGTCTTAAATGTCAATGTTTTTTGTAAAATAATTTTATTTA TACTAGCTACTTTAACATTAACATTAACTATGTCCAACCCCCAAACTCACCACATGCAATGTTAAAATCTAAAAATCGAAATTATTGTACCTATATATTACAAAAACTGTAATCAAAGGCAAAAT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
665 ATTTTATTTAATTGTTCTTAATATTGCATAGGCACATACTACAAGCTACTTTAACATTAACATTAACTATGTCCAACCCCCAAACTCACCACATGCAATGTTAAAATCTAAAAATCGAAATTATT - 65646 0 X_100000_Hum1.bam @HWI-34622816/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
666 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
667 88 D 6 NT 6 "CAAAGT" ChrID X BP 65791 65798 BP_range 65791 65798 Supports 2 2 + 1 1 - 1 1 S1 4 SUM_MS 81 1 NumSupSamples 1 1 X_100000_Hum1.bam 1 6 1 1 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
668 TTATTCTGTCTCCGTACCTCCACCAGCAAAGTTAAAAAGGCAAAATAAATTGTGGATGCGGAACAGAATTCATTCTGTCTCCGTACCTCCACCAGCAAAGTTAAAAACCACCAGCAAAGTTAAAA TAAATAAAATAAAATTAAATAATTTAAACAAATAATAACAAATAATAAATAAATAATAAATTAAATAAATATTTAATAAAATAATCCGCGCTTTCCCTTGCTAAATATTCTGACGCGCAAATATA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
669 AAACCACCAGCAAAGTTTAAACAAAGTTAAATAAAATAAAATTAAATAATTTAAACAAATAATAACAAATAATAAATAAATAATAAATTAAATAAATATTTAATAAAATAATCCGCGCTTTCACT + 65770 41 X_100000_Hum1.bam @HWI-5907661/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
670 AAACCACCAGCAAAGTTTAAACAAAGTTAAATAAAATAAAATTAAATAATTTAAACAAATAATAACAAATAATAAATAAATAATAAATTAAATAAATATTTAATAAAATAATCCGCGCTTTCACT - 65938 40 X_100000_Hum1.bam @HWI-5907661/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
671 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
672 89 D 1 NT 15 "ACTAAGGTTAGTTAA" ChrID X BP 73286 73288 BP_range 73286 73288 Supports 16 16 + 9 9 - 7 7 S1 80 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 28 28 9 9 7 7
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
673 TCAATAACATAAAATCCGCAGCCAATGAAGCCACCCCACCTAATCGCCCCCAAAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTAAAAGGTTACTT AGGAGAAAAAGGAGCTAAATCGAATCTTTAGAGCAGTAGGAACTGACGAAGCCCGAAGATGGTTTAAGAACGTGCAAAATAGACTGTCTAAAGAAATCAGAAAGCTCAAACAAAAACTACTCAAC
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
674 AACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATCTTTAGAGCAGTAGGAACTGACGAAGCCCGAAGATGGTTTAAGAACGTGCAAAATAGACTGTCTAAAGA - 73412 0 X_100000_Hum1.bam @HWI-35879412/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
675 CAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATCTTTAGAGCAGTAGGAACTGACGAAGCCCGAAGATGGTTTAAGAACG + 73208 0 X_100000_Hum1.bam @HWI-2406974/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
676 TCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATCTTTAGAGCAGTAGGAACTGACGAAGCCCGAAGATGGTTTAAG + 73194 0 X_100000_Hum1.bam @HWI-5557433/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
677 ACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATCTTTAGAGCAGTAGGAACTGACGAAG + 73042 0 X_100000_Hum1.bam @HWI-36079962/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
678 CCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATCTTTAGAGCAGTAGGAACTGACG + 73189 0 X_100000_Hum1.bam @HWI-43401778/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
679 AAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATCTTTAGAGCAGT + 73213 0 X_100000_Hum1.bam @HWI-38095603/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
680 AAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATCTTTAGAGCAGT - 73439 0 X_100000_Hum1.bam @HWI-38095603/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
681 CCCAAAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATCTTTAGAG - 73412 0 X_100000_Hum1.bam @HWI-6204284/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
682 CCCAAAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATCTTTAGAG + 73209 0 X_100000_Hum1.bam @HWI-32942618/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
683 CCCCAAAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATCTTTAGA - 73373 0 X_100000_Hum1.bam @HWI-2406974/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
684 AATCGCCCCCAAAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATC - 73412 0 X_100000_Hum1.bam @HWI-4990057/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
685 AATCGCCCCCAAAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAAACCGAATC + 73202 0 X_100000_Hum1.bam @HWI-4990057/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
686 CCCCATCTAATCGCCCCCAAAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAA - 73369 0 X_100000_Hum1.bam @HWI-5557433/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
687 CCCCATCTAATCGCCCCCAAAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGAGCTAA + 73194 0 X_100000_Hum1.bam @HWI-5557433/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
688 AGCCACCCCATCTAATCGCCCCCAAAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGA + 73189 0 X_100000_Hum1.bam @HWI-43401778/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
689 AGCCACCCCATCTAATCGCCCCCAAAATAACCGCACCTACAATTCTTCAAGAAGATCCACAAACCTAAGGCTAGATGAAGCAACTTAAAGGTTACTTACTAAGGTTAGTTAAAGGAGAAAAAGGA - 73349 0 X_100000_Hum1.bam @HWI-43401778/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
690 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
691 90 D 3 NT 2 "TC" ChrID X BP 74133 74137 BP_range 74133 74137 Supports 8 8 + 6 6 - 2 2 S1 21 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 29 28 6 6 2 2
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
692 ACTACTGAAACGACTGTATGACATTGACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAGCTGGCCAGGGTGACCCAATTTATTCTAAAAG TTGATGAAAAAGATGTCTGTTCTGCCACATTCCTTGACATTACGGAAGCCTTTGACCGAGTATGGCACGACGGCTTGCTATATAAACTATCCAGACTCATCCCCAGATACCTATTCGACCTACTT
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
693 TCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCTGTTCTGCC + 74036 0 X_100000_Hum1.bam @HWI-12488803/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
694 ACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCTGTTCTG + 74034 0 X_100000_Hum1.bam @HWI-27349460/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
695 ACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCTGTTCTG - 74188 0 X_100000_Hum1.bam @HWI-27349460/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
696 GACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCTGTTCT + 73987 0 X_100000_Hum1.bam @HWI-38522017/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
697 GACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCTGTTCT - 74157 0 X_100000_Hum1.bam @HWI-20424712/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
698 ACATTGACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGATGTCT + 74028 0 X_100000_Hum1.bam @HWI-13716353/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
699 GTATGACATTGACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAGA + 74023 0 X_100000_Hum1.bam @HWI-220659/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
700 TGTATGACATTGACTCTTTTGCCAAAGCAATCCCTTCCCATCAATTTGGTTTCAGAAAGGATCATGGAGCGGAACATCAACTGGCCAGGGTGACCCAATTTATTTTAAAAGTCTTGATGAAAAAG + 73966 0 X_100000_Hum1.bam @HWI-13683091/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
701 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
702 91 D 47 NT 47 "ATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAAT" ChrID X BP 77564 77612 BP_range 77564 77612 Supports 7 7 + 4 4 - 3 3 S1 20 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 5 2 4 4 3 3
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
703 CTATTTTTCCTCCCGAAAAACATACCTGGAAAACAAAAACAAGGCAACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAAAAA TTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAAATAGCAAACCTGACAGG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
704 TATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCC + 77545 0 X_100000_Hum1.bam @HWI-32552961/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
705 TATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCC - 77712 0 X_100000_Hum1.bam @HWI-32552961/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
706 ATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAAT + 77447 0 X_100000_Hum1.bam @HWI-11566427/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
707 CCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTC + 77435 0 X_100000_Hum1.bam @HWI-32787632/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
708 CCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCA - 77639 0 X_100000_Hum1.bam @HWI-46102035/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
709 CATTCCACCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCC - 77723 0 X_100000_Hum1.bam @HWI-1239853/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
710 CATTCCACCTAATGTATCTGAGAAATACAAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCC + 77531 0 X_100000_Hum1.bam @HWI-1239853/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
711 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
712 92 D 2 NT 1 "T" ChrID X BP 77609 77612 BP_range 77609 77612 Supports 10 10 + 8 8 - 2 2 S1 27 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 2 2 8 8 2 2
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
713 AACTATATAAACAAATAAATACATATATAATACTTACATCCAAACTACATTCCACCTAATGTATCTGAGAAATACAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAA TTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAAATAGCAAACCTGACAGG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
714 GGTTATACTTACCTAATTTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAA + 77593 0 X_100000_Hum1.bam @HWI-45647343/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
715 GGTTATACTTACCTAATTTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACATAAA - 77803 0 X_100000_Hum1.bam @HWI-45647343/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
716 CAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACACA + 77589 0 X_100000_Hum1.bam @HWI-39142891/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
717 AACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAAAGGCAAATAAAATAACACA + 77587 0 X_100000_Hum1.bam @HWI-25178253/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
718 ACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCG + 77575 0 X_100000_Hum1.bam @HWI-20247962/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
719 AGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATAAA + 77568 0 X_100000_Hum1.bam @HWI-44043927/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
720 AGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAATA + 77566 0 X_100000_Hum1.bam @HWI-3015096/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
721 TTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCACGGCCCAATCGTTGCGGCGGTCCTCAGCAACAATTCCTGACCCGGAACATCCTAAAA + 77564 0 X_100000_Hum1.bam @HWI-27716821/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
722 TGTATCTGAGAAATACAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCATGGCCCAATCGTTGCGGCGGTCCTCAGCAACAGATC + 77543 0 X_100000_Hum1.bam @HWI-34434529/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
723 CCTAATGTATCTGAGAAATACAAAAATTAGAGAAATCACAAAAATAAATAACAAAGGTTATACTTACCTAATTTTAATATTACATCCATTCCCATG - 77633 0 X_100000_Hum1.bam @HWI-43182070/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
724 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
725 93 D 3 NT 4 "CTTC" ChrID X BP 78180 78184 BP_range 78180 78184 Supports 3 3 + 3 3 - 0 0 S1 4 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 12 13 3 3 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
726 CTGACAGGCAAACTAGCAGATGCTAATTTGCAACACCATCATGCTGACGTCACGCACGAAAATCCTTTCTCCTAAGACCGCAAAAGCTGAAAAAGGAAACACAAGCTAATACTGGGAAATATATA TTAACAAAATACTTATCTAAACTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGAAACTAATGAAATCATAAA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
727 CTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAGA + 78166 0 X_100000_Hum1.bam @HWI-2954969/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
728 ACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACCTGAAAAACAG + 78126 0 X_100000_Hum1.bam @HWI-45023120/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
729 ACAAGCTAACACTGGGAAATATATACTTCTTAACAAAATACTTATCTAAATTGCCAAATTGACGACTTCAAAGCTGCGGCATCATAACTACAACGACCTCCAAAATAACTTTCAAAAAATGTACC + 78155 0 X_100000_Hum1.bam @HWI-33234321/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
730 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
731 94 D 58 NT 55 "TACCTCCACCAGCAAAGTTAAAAAATAAAAACCGTACCTCCACCAGCAAAGTTAA" ChrID X BP 79439 79498 BP_range 79439 79498 Supports 2 2 + 1 1 - 1 1 S1 4 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 0 1 1 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
732 TCTCCGTACCTCCACCAGCAAAGTTAAATCTCCGTACCTCCACCAGCAAAGTTAAAAAAAATAAATTGTGGATGCGGAACAGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGTTAAAAAAA AAAATAAACAAAATAAAATAAATTAAACAATTAAATTAAATAAAATAAATTAAACAAATAATTAAACTAAACTTATTTAACAACATAATCCGCGCTTCCACCTGCAAAATTTTTTCTGACGCGCA
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
733 AGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGTTAAAAAAATACCTCCACCAGCAAAGTTAAAAAATAAAAACCGTACCTCCACCAGCAAAGTTAAAAAATAAACAAAATAAAATAAATTA + 79394 0 X_100000_Hum1.bam @HWI-9511017/1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
734 AGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGTTAAAAAAATACCTCCACCAGCAAAGTTAAAAAATAAAAACCGTACCTCCACCAGCAAAGTTAAAAAATAAACAAAATAAAATAAATTA - 79674 0 X_100000_Hum1.bam @HWI-9511017/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
735 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
736 95 D 62 NT 22 "GATAAGCCTCCACCAGCAAAGT" ChrID X BP 79439 79502 BP_range 79439 79502 Supports 2 2 + 1 1 - 1 1 S1 4 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 0 1 1 1 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
737 TCTCCGTACCTCCACCAGCAAAGTTAAATCTCCGTACCTCCACCAGCAAAGTTAAAAAAAATAAATTGTGGATGCGGAACAGAATTTATTCTGTCTCCGTACCTCCACCAGCAAAGTTAAAAAAA TAAACAAAATAAAATAAATTAAACAATTAAATTAAATAAAATAAATTAAACAAATAATTAAACTAAACTTATTTAACAACATAATCCGCGCTTCCACCTGCAAAATTTTTTCTGACGCGCAAATA
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
738 TTATACTGTCTCCGTACCTCCACCAGCAAAGTTAAAAAAAGATAAGCCTCCACCAGCAAAGTTAAACAAAATAAAATAAATTAAACAATTAAATTAAATAAAACAAATTAAACAAATAATTAAAC - 79784 0 X_100000_Hum1.bam @HWI-3777251/1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
739 GCGGAACAGAATTTATACTGTCTCCGTACCTCCACCAGCAAAGTTAAAAAAAGATAAGCCTCCACCAGCAAAGTTAAACAAAATAAAATAAATTAAACAATTAAATTAAATAAAACAAATTAAAC + 79387 0 X_100000_Hum1.bam @HWI-5494287/1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
740 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
741 96 D 80 NT 90 "TAGTACATGGATAATTAATCACATGACAACGCACACCAGCTGATCCTGACGAAGCGACACGAAGAAGTACAACACCAAGACATGGAAGAT" ChrID X BP 83324 83405 BP_range 83324 83405 Supports 5 5 + 3 3 - 2 2 S1 12 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 22 13 3 3 2 2
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
742 CACTTTCGCCTACTCCCAAATACATTCATCGACACCACCTTCCTCCATGCAAAGCCTAAAACAAATAAATGGAAAAATAAATTAATTAGACGGAAGGCATAAAAACACAAACACTACTCTCACCT GAATCGGAAGATCGATATAAATAAGATTAGTGCGGCAAAAGCAGGATGAGTATAAGGCGACTCGCTGCAGCAATATATGCACAACGTCACTTACCTGAATTTTCTTGCCGCACTGTCTTCTGAAG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
743 ACTCTCACCTTAGTACATGGATAATTAATCACATGACAACGCACACCAGCTGATCCTGACGAAGCGACACGAAGAAGTACAACACCAAGACATGGAAGATGAATCGGAAGATCGATATAAATAAG + 83128 0 X_100000_Hum1.bam @HWI-40846192/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
744 CACTACTCTCACCTTAGTACATGGATAATTAATCACATGACAACGCACACCAGCTGATCCTGACGAAGCGACACGAAGAAGTACAACACCAAGACATGGAAGATGAATCGGAAGATCGATATAAA + 83310 0 X_100000_Hum1.bam @HWI-35688750/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
745 CACTACTCTCACCTTAGTACATGGATAATTAATCACATGACAACGCACACCAGCTGATCCTGACGAAGCGACACGAAGAAGTACAACACCAAGACATGGAAGATGAATCGGAAGATCGATATAAA - 83529 0 X_100000_Hum1.bam @HWI-12470768/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
746 AAAACACAAACACTACTCTCACCTTAGTACCTGGATAATTAATCACATGACAACGCACACCAGCTGATCCTGACGAAGCGATACGAAGAAGTACAACACCAAGACATGGAAGATGAATCGGAAGA + 83113 0 X_100000_Hum1.bam @HWI-21895065/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
747 ATAAAAACACAAACACTACTCTCACCTTAGTACCTGGATAATTAATCACATGACAACGCACACCAGCTGATCCTGACGAAGCGATACGAAGAAGTACAACACCAAGACATGGAAGATGAATCGGA - 83543 0 X_100000_Hum1.bam @HWI-11201763/2
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
748 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
749 97 D 52 NT 3 "CCG" ChrID X BP 83807 83860 BP_range 83807 83860 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 18 20 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
750 TAAAAACAAACAAATCATTAAATACAAACAAATAAAATAAAATTAAAACAAACTACCTACCTCAACGACCGCAGCAAATTGCTGACCCACATCCAACGCAACAGACAACAGGAGACGGGCTCCGC TCTTACGACGCCGTCTCCATCTCCTGATGCCACTGCGTTAATAAGGATCATTAGCGCGAAGCTGACGTCACATTAACAAGCTGCAAAAATCATCCTCAAAATCTATACTTCTCGTCAATACCGTA
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
751 AAATACAAACAAATAAAATAAAATTAAAACAAACTACCTACCTCAACGACCGCAGCAAATTGCTGACCCACATCCAACGCAACAGACAACAGGAGACGGGCTCCGCCCGTCTTACGACGCCGTCT + 83613 0 X_100000_Hum1.bam @HWI-3696962/1
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
752 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
753 98 D 52 NT 3 "CCG" ChrID X BP 90135 90188 BP_range 90135 90188 Supports 1 1 + 1 1 - 0 0 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 26 20 1 1 0 0
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
754 TAAAAACAAACAAATCATTAAATACAAACAAATAAAATAAAATTAAAACAAACTACCTACCTCAACGACCGCAGCAAATTGCTGACCCACATCCAACGCAACAGACAACAGGAGACGGGCTCCGC TCTTACGACGCCGTCTCCATCTCCTGATGCCACTGCCTTAATAAGGATCATTAGCGCGAAGCTGACGTCACATTAACAAGCTGCAAAAATCATCCTCAAAATCTATACTTCTCGTCAATACCGTA
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
755 AAATACAAACAAATAAAATAAAATTAAAACAAACTACCTACCTCAACGACCGCAGCAAATTGCTGACCCACATCCAACGCAACAGACAACAGGAGACGGGCTCCGCCCGTCTTACGACGCCGTCT + 89941 0 X_100000_Hum1.bam @HWI-7603711/2
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
756 ####################################################################################################
1
078c6ab38858 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 90fe127eb55d6ec4f99a37f7049527b6898e66a4
artbio
parents: 0
diff changeset
757 99 D 77 NT 12 "GTATATGACACA" ChrID X BP 94069 94147 BP_range 94069 94147 Supports 1 1 + 0 0 - 1 1 S1 2 SUM_MS 0 1 NumSupSamples 1 1 X_100000_Hum1.bam 26 24 0 0 1 1
0
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
758 ACAAAAAATTGACAATTTTACAATGCCGCCTGCACCTCCTGTTGCCACTGCATCAATAAGGATCAGTAGCGCGGAGCTGATGCCACTTTAAAAAGCTGAAAAATCCGTCCACAAAATGTATACTC AAACAAAGGACAATCTAAAATTAGCAAACCAGACAGGCATACAGGCATACTAGCAGATGCTAATATGCAACTCCATCCTGCTGACGACAACCACGCAACTCCTTTCTCCAAGACCGCAAATACTG
decc6b5631dc "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/pindel commit 9bae2cc35b71dabcb73cd586eb1bdc458132548c"
artbio
parents:
diff changeset
759 ACTGCATCAATAAGGATCACTAGCGCGGAGCTGATGCCACTTTAAAAAGCTGAAAAATCCGTCCACAAAATGTATACTCGTATATGACACAAAACAAAGGACAATCCAAAATTAGCAAACCAGAC - 94115 0 X_100000_Hum1.bam @HWI-11608458/1