Mercurial > repos > artbio > probecoverage

diff test-data/coverage.tab @ 6:7c4feda2d9c7 draft

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"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/probecoverage commit 62a8b073b9ac98b0231641e5266768e7f8b80b89"
author artbio
date Tue, 07 Jan 2020 06:08:56 -0500
parents dbeb4a0abfc6
children
line wrap: on
line diff
--- a/test-data/coverage.tab	Sat Jun 02 07:10:17 2018 -0400
+++ b/test-data/coverage.tab	Tue Jan 07 06:08:56 2020 -0500
@@ -674,39 +674,39 @@
 chr16	20361937	20362204	uc002dgz.3_exon_9_0_chr16_20361972_r;uc002dha.3_exon_9_0_chr16_20361972_r;uc002dhb.3_exon_10_0_chr16_20361972_r	0	0	0
 chr16	20363947	20364103	uc002dgz.3_exon_10_0_chr16_20364011_r;uc002dha.3_exon_10_0_chr16_20364011_r;uc002dhb.3_exon_11_0_chr16_20364011_r	0	0	0
 chr19	3094375	3094805	uc002lxd.3_exon_0_0_chr19_3094408_f	16	0	0
-chr19	3110125	3110366	uc002lxd.3_exon_1_0_chr19_3110147_f	309	0	0
+chr19	3110125	3110366	uc002lxd.3_exon_1_0_chr19_3110147_f	311	0	0
 chr19	3113305	3113513	uc002lxd.3_exon_2_0_chr19_3113328_f	163	0	0
 chr19	3114915	3115090	uc002lxd.3_exon_3_0_chr19_3114942_f	37	0	0
 chr19	3118900	3119070	uc002lxd.3_exon_4_0_chr19_3118922_f	390	0	0
-chr19	3119175	3119384	uc002lxd.3_exon_5_0_chr19_3119204_f	957	0	0
+chr19	3119175	3119384	uc002lxd.3_exon_5_0_chr19_3119204_f	958	0	0
 chr19	3120965	3121304	uc002lxd.3_exon_6_0_chr19_3120987_f	1112	0	0
-chr19	3121310	3121447	uc002lxd.3_exon_6_0_chr19_3120987_f	1461	0	0
+chr19	3121310	3121447	uc002lxd.3_exon_6_0_chr19_3120987_f	1462	0	0
 chr19	47341397	47341813	uc002pft.1_exon_0_0_chr19_47341423_r;uc002pfu.1_exon_0_0_chr19_47341423_r	1325	0	0
 chr19	47341952	47342086	uc002pft.1_exon_1_0_chr19_47341997_r;uc002pfu.1_exon_1_0_chr19_47341997_r	1462	0	0
-chr19	47342697	47342876	uc002pft.1_exon_2_0_chr19_47342722_r	1655	0	0
+chr19	47342697	47342876	uc002pft.1_exon_2_0_chr19_47342722_r	1664	0	0
 chr19	47349227	47349441	uc002pft.1_exon_3_0_chr19_47349250_r;uc002pfu.1_exon_2_0_chr19_47349250_r	1173	0	0
-chr19	47353997	47354239	uc002pft.1_exon_4_0_chr19_47354021_r;uc002pfu.1_exon_3_0_chr19_47354021_r	1571	0	0
-chr20	52769992	52770580	uc002xwu.1_exon_0_0_chr20_52769988_r;uc002xwv.2_exon_0_0_chr20_52769988_r;uc002xww.2_exon_0_0_chr20_52769988_r	0	6777	0
-chr20	52770622	52770705	uc002xwu.1_exon_0_0_chr20_52769988_r;uc002xwv.2_exon_0_0_chr20_52769988_r;uc002xww.2_exon_0_0_chr20_52769988_r	0	2069	0
-chr20	52770707	52771336	uc002xwu.1_exon_0_0_chr20_52769988_r;uc002xwv.2_exon_0_0_chr20_52769988_r;uc002xww.2_exon_0_0_chr20_52769988_r	0	8386	0
-chr20	52773678	52773860	uc002xwu.1_exon_1_0_chr20_52773708_r;uc002xwv.2_exon_1_0_chr20_52773708_r;uc002xww.2_exon_1_0_chr20_52773708_r	0	3269	0
-chr20	52773898	52774150	uc002xwu.1_exon_2_0_chr20_52773927_r;uc002xwv.2_exon_2_0_chr20_52773927_r	0	4042	0
-chr20	52774593	52774726	uc002xwu.1_exon_3_0_chr20_52774625_r;uc002xwv.2_exon_3_0_chr20_52774625_r;uc002xww.2_exon_2_0_chr20_52774625_r	0	2012	0
-chr20	52775473	52775682	uc002xwu.1_exon_4_0_chr20_52775496_r;uc002xwv.2_exon_4_0_chr20_52775496_r;uc002xww.2_exon_3_0_chr20_52775496_r	0	3586	0
-chr20	52779223	52779439	uc002xwu.1_exon_5_0_chr20_52779256_r;uc002xwv.2_exon_5_0_chr20_52779256_r;uc002xww.2_exon_4_0_chr20_52779256_r	0	3229	0
-chr20	52780968	52781144	uc002xwu.1_exon_6_0_chr20_52780991_r;uc002xwv.2_exon_6_0_chr20_52780991_r;uc002xww.2_exon_5_0_chr20_52780991_r	0	2534	0
-chr20	52782253	52782397	uc002xwu.1_exon_7_0_chr20_52782281_r;uc002xwv.2_exon_7_0_chr20_52782281_r;uc002xww.2_exon_6_0_chr20_52782281_r	0	2232	0
-chr20	52786108	52786244	uc002xwu.1_exon_8_0_chr20_52786131_r;uc002xwv.2_exon_8_0_chr20_52786131_r;uc002xww.2_exon_7_0_chr20_52786131_r	0	2378	0
-chr20	52788093	52788504	uc002xwu.1_exon_9_0_chr20_52788116_r;uc002xwv.2_exon_9_0_chr20_52788116_r;uc002xww.2_exon_8_0_chr20_52788116_r	0	5400	0
+chr19	47353997	47354239	uc002pft.1_exon_4_0_chr19_47354021_r;uc002pfu.1_exon_3_0_chr19_47354021_r	1574	0	0
+chr20	52769992	52770580	uc002xwu.1_exon_0_0_chr20_52769988_r;uc002xwv.2_exon_0_0_chr20_52769988_r;uc002xww.2_exon_0_0_chr20_52769988_r	0	6783	0
+chr20	52770622	52770705	uc002xwu.1_exon_0_0_chr20_52769988_r;uc002xwv.2_exon_0_0_chr20_52769988_r;uc002xww.2_exon_0_0_chr20_52769988_r	0	2070	0
+chr20	52770707	52771336	uc002xwu.1_exon_0_0_chr20_52769988_r;uc002xwv.2_exon_0_0_chr20_52769988_r;uc002xww.2_exon_0_0_chr20_52769988_r	0	8394	0
+chr20	52773678	52773860	uc002xwu.1_exon_1_0_chr20_52773708_r;uc002xwv.2_exon_1_0_chr20_52773708_r;uc002xww.2_exon_1_0_chr20_52773708_r	0	3272	0
+chr20	52773898	52774150	uc002xwu.1_exon_2_0_chr20_52773927_r;uc002xwv.2_exon_2_0_chr20_52773927_r	0	4046	0
+chr20	52774593	52774726	uc002xwu.1_exon_3_0_chr20_52774625_r;uc002xwv.2_exon_3_0_chr20_52774625_r;uc002xww.2_exon_2_0_chr20_52774625_r	0	2017	0
+chr20	52775473	52775682	uc002xwu.1_exon_4_0_chr20_52775496_r;uc002xwv.2_exon_4_0_chr20_52775496_r;uc002xww.2_exon_3_0_chr20_52775496_r	0	3590	0
+chr20	52779223	52779439	uc002xwu.1_exon_5_0_chr20_52779256_r;uc002xwv.2_exon_5_0_chr20_52779256_r;uc002xww.2_exon_4_0_chr20_52779256_r	0	3232	0
+chr20	52780968	52781144	uc002xwu.1_exon_6_0_chr20_52780991_r;uc002xwv.2_exon_6_0_chr20_52780991_r;uc002xww.2_exon_5_0_chr20_52780991_r	0	2537	0
+chr20	52782253	52782397	uc002xwu.1_exon_7_0_chr20_52782281_r;uc002xwv.2_exon_7_0_chr20_52782281_r;uc002xww.2_exon_6_0_chr20_52782281_r	0	2233	0
+chr20	52786108	52786244	uc002xwu.1_exon_8_0_chr20_52786131_r;uc002xwv.2_exon_8_0_chr20_52786131_r;uc002xww.2_exon_7_0_chr20_52786131_r	0	2379	0
+chr20	52788093	52788504	uc002xwu.1_exon_9_0_chr20_52788116_r;uc002xwv.2_exon_9_0_chr20_52788116_r;uc002xww.2_exon_8_0_chr20_52788116_r	0	5404	0
 chr20	52789423	52789663	uc002xwv.2_exon_10_0_chr20_52789448_r;uc002xww.2_exon_9_0_chr20_52789448_r	0	517	0
-chr20	52789828	52790550	uc002xwv.2_exon_11_0_chr20_52789861_r;uc002xww.2_exon_10_0_chr20_52789861_r	0	1557	0
+chr20	52789828	52790550	uc002xwv.2_exon_11_0_chr20_52789861_r;uc002xww.2_exon_10_0_chr20_52789861_r	0	1559	0
 chr21	37832893	37833027	uc002yvk.2_exon_0_0_chr21_37832920_r;uc002yvl.1_exon_0_0_chr21_37832920_r;uc002yvm.1_exon_0_0_chr21_37832920_r;uc002yvn.2_exon_0_0_chr21_37832920_r;uc002yvo.1_exon_0_0_chr21_37832920_r;uc021wja.1_exon_0_0_chr21_37833274_r	0	0	2296
-chr21	37833063	37834107	uc002yvk.2_exon_0_0_chr21_37832920_r;uc002yvl.1_exon_0_0_chr21_37832920_r;uc002yvm.1_exon_0_0_chr21_37832920_r;uc002yvn.2_exon_0_0_chr21_37832920_r;uc002yvo.1_exon_0_0_chr21_37832920_r;uc021wja.1_exon_0_0_chr21_37833274_r	0	0	2903
-chr21	37849648	37849906	uc002yvl.1_exon_1_0_chr21_37849672_r	0	0	3388
-chr21	37851763	37852430	uc002yvl.1_exon_2_0_chr21_37851793_r;uc002yvm.1_exon_1_0_chr21_37851793_r	0	0	5073
-chr21	37882628	37882821	uc002yvn.2_exon_1_0_chr21_37882661_r;uc002yvo.1_exon_1_0_chr21_37882661_r	0	0	3018
+chr21	37833063	37834107	uc002yvk.2_exon_0_0_chr21_37832920_r;uc002yvl.1_exon_0_0_chr21_37832920_r;uc002yvm.1_exon_0_0_chr21_37832920_r;uc002yvn.2_exon_0_0_chr21_37832920_r;uc002yvo.1_exon_0_0_chr21_37832920_r;uc021wja.1_exon_0_0_chr21_37833274_r	0	0	2905
+chr21	37849648	37849906	uc002yvl.1_exon_1_0_chr21_37849672_r	0	0	3389
+chr21	37851763	37852430	uc002yvl.1_exon_2_0_chr21_37851793_r;uc002yvm.1_exon_1_0_chr21_37851793_r	0	0	5082
+chr21	37882628	37882821	uc002yvn.2_exon_1_0_chr21_37882661_r;uc002yvo.1_exon_1_0_chr21_37882661_r	0	0	3019
 chr21	37914828	37915151	uc002yvn.2_exon_2_0_chr21_37914863_r	0	0	323
-chr21	37948678	37948900	uc002yvo.1_exon_2_0_chr21_37948709_r	0	0	1946
+chr21	37948678	37948900	uc002yvo.1_exon_2_0_chr21_37948709_r	0	0	1948
 chrX	22050889	22051274	uc004dah.3_exon_0_0_chrX_22050921_f;uc011mjr.2_exon_0_0_chrX_22050921_f	0	0	0
 chrX	22056139	22056214	uc004dah.3_exon_1_0_chrX_22056587_f;uc011mjr.2_exon_1_0_chrX_22056587_f;uc011mjs.2_exon_0_0_chrX_22056171_f	0	0	0
 chrX	22056229	22056691	uc004dah.3_exon_1_0_chrX_22056587_f;uc011mjr.2_exon_1_0_chrX_22056587_f;uc011mjs.2_exon_0_0_chrX_22056171_f	0	0	0