annotate test-data/chrY-1-500k.fa.out @ 13:530626b0757c draft

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/repenrich commit df6b9491ad06e8a85e67c663b68db3cce3eb0115

  192  10.4  9.8  2.2  chrY            1     256 (3667096) +  TART_B1        LINE/Jockey            590  864 (9790) 120772
   88  11.5  9.7  3.3  chrY          270     413 (3666939) +  TART_B1        LINE/Jockey            712  864 (9790) 120772
  631  14.8  8.1  4.6  chrY          426    1187 (3666165) +  TART_B1        LINE/Jockey           9741 10528  (126) 120773
  286   3.3  0.0  0.0  chrY         1192    1490 (3665862) +  TART-A         LINE/Jockey           9873 10171 (5405) 120774
  448   7.4  0.0  0.5  chrY         8991    9409 (3657943) +  HETA           LINE/Jockey           5661 6077    (4) 120775
    7  12.2  0.0  0.0  chrY         9408    9448 (3657904) C  DNAREP1_DM     RC/Helitron          (217)  377    337 120776
   38  19.9 15.5  1.8  chrY         9447    9543 (3657809) C  DNAREP1_DM     RC/Helitron          (340)  254    145 120776
   19   5.9  0.0  0.0  chrY         9560    9593 (3657759) C  DNAREP1_DM     RC/Helitron          (551)   43     10 120777
  167  19.0 32.1  0.7  chrY        10936   11253 (3656099) C  DNAREP1_DM     RC/Helitron            (0)  594    178 120778
  523   2.1  0.0  0.0  chrY        11410   11833 (3655519) +  PROTOP_A       DNA/P                    1  424  (681) 120779
  312   2.5  0.0  0.0  chrY        11821   12098 (3655254) C  PROTOP_A       DNA/P                (645)  460    183 120780
   15  18.1  2.6  0.0  chrY        12233   12270 (3655082) +  (GCCTTT)n      Simple_repeat            1   39    (0) 120781
   14  26.9  1.5  4.5  chrY        12814   12881 (3654471) +  A-rich         Low_complexity           1   66    (0) 120782
  229  30.4  3.5  9.6  chrY        13410   14042 (3653310) +  Chouto_I-int   LTR/Gypsy              854 1370 (4345) 120783
   15  18.1  2.6  0.0  chrY        14385   14422 (3652930) +  (GCCTTT)n      Simple_repeat            1   39    (0) 120784
  339   2.7  0.9  0.0  chrY        14819   15147 (3652205) C  TC1-2_DM       DNA/TcMar-Tc1          (0) 1644   1313 120785
  182  25.8  2.3  4.7  chrY        15489   15748 (3651604) +  Chouto_I-int   LTR/Gypsy             1117 1370 (4345) 120786
  316   2.2  0.0  0.0  chrY        16562   16839 (3650513) C  PROTOP_A       DNA/P                (645)  460    183 120787
   15  18.1  2.6  0.0  chrY        16974   17011 (3650341) +  (GCCTTT)n      Simple_repeat            1   39    (0) 120788
   14  28.5  1.5  3.0  chrY        17555   17621 (3649731) +  A-rich         Low_complexity           1   66    (0) 120789
   13  28.9  5.2  1.2  chrY        17622   17627 (3649725) +  (AACACA)n      Simple_repeat            5   80    (0) 120790
  357  26.2  5.4  5.4  chrY        18175   18691 (3648661) +  Chouto_I-int   LTR/Gypsy              854 1370 (4345) 120791
  717  34.9  4.9  4.8  chrY        19620   21544 (3645808) +  GTWIN_I-int    LTR/Gypsy             2720 4645 (1776) 120792
  404   2.8  0.7  0.2  chrY        22648   23056 (3644296) +  (TAATA)n       Simple_repeat            1  411    (0) 120793
  293   8.9  0.0  0.4  chrY        23057   23338 (3644014) C  Baggins1       LINE/LOA              (69) 5384   5104 120794
  855   5.7  5.7  0.0  chrY        23356   24131 (3643221) C  Baggins1       LINE/LOA             (730) 4723   3904 120794
   41  12.2 57.0  0.0  chrY        24134   24240 (3643112) C  Baggins1       LINE/LOA            (1656) 3797   3630 120794
   87  17.3 24.9  0.0  chrY        25318   25490 (3641862) +  DOC3_DM        LINE/Jockey           4195 4410  (330) 120795
   14  14.5  3.2  0.0  chrY        25604   25634 (3641718) +  (TTC)n         Simple_repeat            1   32    (0) 120796
  232  12.5 34.0  0.9  chrY        25758   26095 (3641257) C  DNAREP1_DM     RC/Helitron          (134)  460     12 120797
   34  14.3  0.0  0.0  chrY        29452   29507 (3637845) C  DNAREP1_DM     RC/Helitron            (0)  594    539 120798
   39  14.7  0.0  0.0  chrY        29529   29596 (3637756) C  DNAREP1_DM     RC/Helitron          (176)  418    351 120798
   76  23.2  5.8 14.7  chrY        29598   29804 (3637548) C  Gypsy8_LTR     LTR/Gypsy            (113)  191      1 120799
   58  22.3  4.9  1.6  chrY        29805   29918 (3637434) C  DNAREP1_DM     RC/Helitron          (236)  358    241 120798
 1970   2.5  4.1  0.1  chrY        30007   31675 (3635677) +  S_DM           DNA/TcMar-Tc1            1 1736    (0) 120800
   37  18.0  0.0  0.0  chrY        31701   31761 (3635591) C  DNAREP1_DM     RC/Helitron          (427)  167    107 120798
  148  13.6 21.6  0.2  chrY        31786   32131 (3635221) +  DNAREP1_DM     RC/Helitron            276  592    (2) 120801
   48  25.7  8.3  0.7  chrY        32132   32264 (3635088) +  PROTOP_B       DNA/P                  846  988  (165) 120802
   52  20.7 33.9  0.7  chrY        32428   32539 (3634813) +  Gypsy8_LTR     LTR/Gypsy                2  150  (154) 120803
   19  22.2  0.0 12.6  chrY        32733   32830 (3634522) +  R1_DM          LINE/R1               2449 2535 (2821) 120804
   19  18.9  0.0  0.0  chrY        32829   32881 (3634471) +  R1_DM          LINE/R1               3024 3076 (2280) 120804
 1006   9.8 15.8  0.0  chrY        32895   34029 (3633323) +  DMRT1A         LINE/R1               1550 2863 (2320) 120805
  389   5.3  5.3  0.0  chrY        34025   34383 (3632969) C  ROOA_LTR       LTR/Pao                (8)  378      1 120806
  955   8.4  7.5  0.4  chrY        34387   35386 (3631966) C  ROOA_I-int     LTR/Pao             (2141) 6115   4397 120807
 1198   4.8 14.0  0.0  chrY        35395   36531 (3630821) C  ROOA_I-int     LTR/Pao             (2763) 4086   2791 120807
    1   0.0  3.0  0.0  chrY        36530   36562 (3630790) C  ROOA_I-int     LTR/Pao             (6814)   35      2 120807
   26   5.0  0.0  0.0  chrY        36564   36603 (3630749) C  ROOA_LTR       LTR/Pao                (0)  386    347 120807
   13  12.8  5.6  2.7  chrY        36636   36671 (3630681) +  (TTTGA)n       Simple_repeat            1   37    (0) 120808
  151  14.3 36.2  3.5  chrY        36861   37119 (3630233) C  MDG1_LTR       LTR/Gypsy             (29)  413     71 120809
  252   3.6  0.0  0.0  chrY        37122   37377 (3629975) +  (TTA)n         Simple_repeat            1  256    (0) 120810
   27   7.2  1.8  1.8  chrY        37392   37455 (3629897) C  MDG1_I-int     LTR/Gypsy              (0) 6596   6543 120811
  265  12.2  1.7  6.7  chrY        37454   37751 (3629601) +  Gypsy6A_LTR    LTR/Gypsy               20  303  (117) 120812
   13  14.6  4.8  2.3  chrY        37757   37798 (3629554) +  Gypsy3_LTR     LTR/Gypsy              353  395    (3) 120813
 6456  14.1  2.6  1.5  chrY        37869   44315 (3623037) +  Gypsy6_I-int   LTR/Gypsy              404 7011    (1) 120814
  287  12.1  1.6  6.3  chrY        44319   44635 (3622717) +  Gypsy6A_LTR    LTR/Gypsy                1  303  (117) 120814
   13  14.6  4.8  2.3  chrY        44641   44682 (3622670) +  Gypsy3_LTR     LTR/Gypsy              353  395    (3) 120815
   50   5.1  6.0  1.1  chrY        44688   44770 (3622582) +  (TA)n          Simple_repeat            1   87    (0) 120816
   14  17.1  0.0  4.9  chrY        44771   44845 (3622507) C  MDG1_I-int     LTR/Gypsy             (57) 6539   6469 120817
   35  15.9  5.1  1.2  chrY        44854   44932 (3622420) +  (AT)n          Simple_repeat            1   82    (0) 120818
  326   5.5 39.0  0.5  chrY        44935   45411 (3621941) C  MDG1_I-int     LTR/Gypsy             (57) 6539   5880 120817
  500   4.8  7.5  0.1  chrY        45411   46080 (3621272) C  MDG1_I-int     LTR/Gypsy            (942) 5654   4936 120817
  802  11.8 10.3  0.8  chrY        46078   48270 (3619082) C  MDG1_I-int     LTR/Gypsy           (2450) 4146   1651 120817
 1597   3.4  7.3  0.1  chrY        48267   49596 (3617756) C  DMCR1A         LINE/CR1            (2779) 1691    267 120819
   15  27.8  2.5  3.9  chrY        50287   50330 (3617022) +  A-rich         Low_complexity           1   76    (0) 120820
   21  13.2  0.0  0.0  chrY        50331   50363 (3616989) +  (A)n           Simple_repeat            1   33    (0) 120821
  348  28.7  4.3  5.7  chrY        50819   51425 (3615927) +  GTWIN_I-int    LTR/Gypsy              650 1373 (4342) 120822
  902  27.7  4.1  3.2  chrY        52615   54140 (3613212) +  GTWIN_I-int    LTR/Gypsy             2319 3859 (1856) 120822
  796   5.4 17.4  0.6  chrY        54268   55834 (3611518) C  MDG1_I-int     LTR/Gypsy           (3117) 3479   1651 120823
 1627   3.4  5.9  0.3  chrY        55831   57180 (3610172) C  DMCR1A         LINE/CR1            (2779) 1691    267 120824
   15  23.7  0.0  0.0  chrY        58915   58954 (3608398) +  A-rich         Low_complexity           1   40    (0) 120825
 1008  32.6  6.9  4.6  chrY        58976   61222 (3606130) +  GTWIN_I-int    LTR/Gypsy             2319 4614 (1807) 120826
    2  40.4  0.0  0.0  chrY        61878   61971 (3605381) +  GTWIN_I-int    LTR/Gypsy             5384 5477  (811) 120826
   15  18.1  2.6  0.0  chrY        62844   62881 (3604471) +  (GCCTTT)n      Simple_repeat            1   39    (0) 120827
  114   2.2  0.0  3.6  chrY        63275   63416 (3603936) C  DMCR1A         LINE/CR1            (4191)  279    143 120828
    4  18.9  0.0  0.0  chrY        63412   63464 (3603888) C  MDG1_I-int     LTR/Gypsy           (5014) 1582   1530 120829
   11  14.3  0.0  0.0  chrY        63466   63500 (3603852) C  MDG1_I-int     LTR/Gypsy           (5968)  628    594 120829
  219  14.0 10.6  0.8  chrY        63510   63739 (3603613) C  MDG1_LTR       LTR/Gypsy            (103)  339     87 120830
  119   5.5  1.3  1.3  chrY        63740   63894 (3603458) +  (TTA)n         Simple_repeat            1  155    (0) 120831
  299   3.9  4.1  2.6  chrY        63901   64161 (3603191) C  BATUMI_LTR     LTR/Pao                (0)  272      2 120832
   83   3.6  0.0  0.0  chrY        64162   64247 (3603105) +  (ATT)n         Simple_repeat            1   86    (0) 120833
 1807  12.4  8.8  1.5  chrY        64256   66725 (3600627) C  Stalker2_I-int LTR/Gypsy           (2036) 5360   2603 120834
   75   6.2  0.0  0.0  chrY        66734   66813 (3600539) +  DM1731_LTR     LTR/Copia               29  108  (228) 120835
  302   4.0  0.0  0.0  chrY        66811   67062 (3600290) +  DM1731_LTR     LTR/Copia               85  336    (0) 120835
   76   7.4  3.7  0.0  chrY        67063   67143 (3600209) C  Invader1_LTR   LTR/Gypsy              (4)  419    336 120836
  155   5.3  1.9  6.5  chrY        67141   67302 (3600050) C  Invader1_LTR   LTR/Gypsy            (259)  164     10 120836
  423   7.3  6.2  0.4  chrY        67303   67741 (3599611) C  Invader1_I-int LTR/Gypsy              (0) 3186   2723 120836
   15   6.3  2.4 10.5  chrY        67757   67800 (3599552) +  (TTA)n         Simple_repeat            1   40    (0) 120837
 1962  26.2  5.1  5.6  chrY        68051   71412 (3595940) C  MICROPIA_I-int LTR/Gypsy            (499) 3977    386 120838
   87  24.0  9.6  2.2  chrY        71416   71581 (3595771) C  MICROPIA_I-int LTR/Gypsy           (4273)  203     26 120838
   70  34.3  5.1  0.4  chrY        71587   71884 (3595468) C  Gypsy11_I-int  LTR/Gypsy           (5776)  733    538 120839
   23  18.9  4.9  0.0  chrY        72296   72356 (3594996) +  (TTTTC)n       Simple_repeat            1   64    (0) 120840
   35  12.8  1.3  4.1  chrY        72436   72441 (3594911) +  (TTTTCTT)n     Simple_repeat            1   72    (0) 120841
   29  16.3  0.0  4.6  chrY        72442   72509 (3594843) +  (CTTTT)n       Simple_repeat            1   65    (0) 120842
   13  18.8  4.5  2.2  chrY        72660   72703 (3594649) +  (TTCTT)n       Simple_repeat            1   45    (0) 120843
  609   6.5  3.5  2.6  chrY        74455   75021 (3592331) C  Gypsy11_I-int  LTR/Gypsy           (2059) 1465    894 120839
   27  40.0  7.5  5.9  chrY        75016   75480 (3591872) C  Gypsy11_I-int  LTR/Gypsy           (4596) 1913   1442 120844
   90  38.3 13.1  1.7  chrY        75565   76142 (3591210) C  Gypsy11_I-int  LTR/Gypsy           (5454) 1055    532 120844
   23  18.9  4.9  0.0  chrY        76554   76614 (3590738) +  (TTTTC)n       Simple_repeat            1   64    (0) 120845
   35  12.8  1.3  4.1  chrY        76694   76699 (3590653) +  (TTTTCTT)n     Simple_repeat            1   72    (0) 120846
   29  16.3  0.0  4.6  chrY        76700   76767 (3590585) +  (CTTTT)n       Simple_repeat            1   65    (0) 120847
  609   6.5  3.5  2.6  chrY        78692   79258 (3588094) C  Gypsy11_I-int  LTR/Gypsy           (2059) 1465    894 120844
   27  40.0  7.5  5.9  chrY        79253   79717 (3587635) C  Gypsy5_I-int   LTR/Gypsy           (4596) 1913   1442 120848
   90  38.3 13.1  1.7  chrY        79802   80379 (3586973) C  Gypsy5_I-int   LTR/Gypsy           (5454) 1055    532 120848
   23  18.9  4.9  0.0  chrY        80791   80851 (3586501) +  (TTTTC)n       Simple_repeat            1   64    (0) 120849
   35  12.8  1.3  4.1  chrY        80931   80936 (3586416) +  (TTTTCTT)n     Simple_repeat            1   72    (0) 120850
   29  16.3  0.0  4.6  chrY        80937   81004 (3586348) +  (CTTTT)n       Simple_repeat            1   65    (0) 120851
   15  17.7  0.0  5.0  chrY        81155   81196 (3586156) +  (TTCTT)n       Simple_repeat            1   40    (0) 120852
   47  40.4  1.1  4.5  chrY        87932   88115 (3579237) C  Copia1-I_DM    LTR/Copia           (1481) 2643   2466 120853
   94  10.2 20.4  0.0  chrY        88303   88449 (3578903) C  Mariner2_DM    DNA/TcMar-Tc1         (20)  892    716 120854
  138   9.8  5.9  4.0  chrY        88450   88619 (3578733) C  Mariner2_DM    DNA/TcMar-Tc1        (313)  599    427 120854
  622  10.4 14.1  5.2  chrY        89140   89849 (3577503) C  Gypsy8_I-int   LTR/Gypsy           (1012) 3335   2566 120855
 1332   9.7 12.2  0.0  chrY        89833   91082 (3576270) C  DMRT1B         LINE/R1                (6) 5177   3775 120856
 2920  10.7 12.9  0.0  chrY        91078   93804 (3573548) C  DMRT1B         LINE/R1             (1620) 3563    486 120856
  125  22.6  3.5  3.3  chrY        93803   94127 (3573225) C  DMRT1B         LINE/R1             (4839)  344      1 120856
  227  12.5 11.5  0.6  chrY        94154   94458 (3572894) C  Gypsy8_I-int   LTR/Gypsy           (1749) 2598   2261 120857
  100  14.4 21.9  4.4  chrY        94994   95189 (3572163) C  Gypsy8_I-int   LTR/Gypsy           (4118)  229      1 120857
  150  15.1 11.6  8.8  chrY        95190   95397 (3571955) C  Gypsy8_LTR     LTR/Gypsy             (90)  214      1 120858
    7  28.6  0.0  0.0  chrY        95705   95746 (3571606) C  NOMAD_I-int    LTR/Gypsy            (575) 5997   5956 120859
   97  29.3 24.1  0.0  chrY        96177   96425 (3570927) C  Gypsy4_I-int   LTR/Gypsy           (2878) 3410   3102 120860
   49  14.3 19.8  0.0  chrY        96422   96512 (3570840) C  TLD2           LTR/Gypsy             (99)  119     11 120861
   25  15.8  0.0  0.0  chrY        96613   96654 (3570698) +  (T)n           Simple_repeat            1   42    (0) 120862
   61  35.8  3.1  6.9  chrY        97138   97332 (3570020) C  Chouto_I-int   LTR/Gypsy           (4348) 1367   1180 120863
  168  30.6 20.1  5.7  chrY        97509   97955 (3569397) C  Chouto_I-int   LTR/Gypsy           (4368) 1347    840 120864
   92   9.9  0.9  0.0  chrY       104060  104170 (3563182) +  DNAREP1_DM     RC/Helitron            483  594    (0) 120865
  237  13.6 24.3  2.1  chrY       104327  104680 (3562672) +  DNAREP1_DM     RC/Helitron             91  521   (73) 120866
  130  14.3  5.3  2.6  chrY       104882  105039 (3562313) C  DM176_I-int    LTR/Gypsy           (2049) 4371   4209 120867
    7  24.4  0.0  0.0  chrY       105040  105080 (3562272) +  DNAREP1_DM     RC/Helitron              1   41  (553) 120868
  475  11.2 13.5  2.0  chrY       105569  106153 (3561199) +  Gypsy6_I-int   LTR/Gypsy             6359 7009    (3) 120869
  451   7.3  2.9  0.0  chrY       106159  106566 (3560786) +  Gypsy6A_LTR    LTR/Gypsy                1  420    (0) 120869
 1317   4.2  5.4  0.7  chrY       106701  108611 (3558741) +  DMRT1B         LINE/R1               3182 5183    (0) 120870
  305   3.3  5.9  0.0  chrY       108617  108920 (3558432) C  Invader4_I-int LTR/Gypsy            (838) 1575   1254 120871
 1148   5.9  5.5  0.4  chrY       108913  109884 (3557468) C  Invader4_I-int LTR/Gypsy           (1392) 1021      1 120871
  117   7.0  0.0  0.0  chrY       109885  109998 (3557354) C  Invader4_LTR   LTR/Gypsy              (0)  346    233 120871
   12   4.3  8.3  0.0  chrY       110509  110532 (3556820) +  (TGTTG)n       Simple_repeat            1   26    (0) 120872
  190  32.4  3.8  3.8  chrY       111034  111688 (3555664) C  HMSBEAGLE_I-int LTR/Gypsy            (755) 5774   5120 120873
  227  36.6  2.6  1.4  chrY       111733  112660 (3554692) C  HMSBEAGLE_I-int LTR/Gypsy           (1577) 4952   4014 120873
  638  33.0  4.6  5.2  chrY       112665  114714 (3552638) C  HMSBEAGLE_I-int LTR/Gypsy           (2734) 3795   1759 120873
  116   8.1  0.0  0.0  chrY       115377  115495 (3551857) C  STALKER4_LTR   LTR/Gypsy            (236)  166     48 120874
  595   4.2 16.6  1.0  chrY       115496  116098 (3551254) +  PROTOP_B       DNA/P                    1  696  (457) 120875
  108  36.6  4.9  2.2  chrY       116324  117145 (3550207) C  Gypsy2-I_DM    LTR/Gypsy            (507) 6038   5196 120876
  197  32.4  3.8  3.2  chrY       117344  117994 (3549358) C  HMSBEAGLE_I-int LTR/Gypsy            (755) 5774   5120 120877
  236  36.7  2.6  1.3  chrY       118039  118965 (3548387) C  HMSBEAGLE_I-int LTR/Gypsy           (1577) 4952   4014 120877
  616  33.5  5.2  6.7  chrY       118970  121035 (3546317) C  HMSBEAGLE_I-int LTR/Gypsy           (2734) 3795   1759 120877
   16  26.6  1.4  4.5  chrY       121317  121385 (3545967) +  (TTATAT)n      Simple_repeat            1   67    (0) 120878
   30  19.5  0.0  8.1  chrY       121529  121552 (3545800) C  STALKER4_LTR   LTR/Gypsy            (297)  105     87 120879
   34   0.0  6.5  2.1  chrY       121553  121598 (3545754) +  (TTA)n         Simple_repeat            1   48    (0) 120880
   30  19.5  0.0  8.1  chrY       121599  121636 (3545716) C  STALKER4_LTR   LTR/Gypsy            (316)   86     49 120879
  598   4.0 16.6  1.0  chrY       121637  122239 (3545113) +  PROTOP_B       DNA/P                    1  696  (457) 120881
  110  36.5  4.9  2.2  chrY       122465  123286 (3544066) C  Gypsy2-I_DM    LTR/Gypsy            (507) 6038   5196 120882
  189  31.6  4.4  1.6  chrY       123484  124048 (3543304) C  HMSBEAGLE_I-int LTR/Gypsy            (755) 5774   5194 120883
  404   5.1  1.7  0.2  chrY       124210  124742 (3542610) +  (GAGAA)n       Simple_repeat            1  541    (0) 120884
  111  32.7  0.0  1.0  chrY       124751  125056 (3542296) C  DM1731_I-int   LTR/Copia           (2220) 1756   1454 120885
   36  37.3  4.4  1.6  chrY       125115  125362 (3541990) C  DM1731_I-int   LTR/Copia           (2880) 1096    842 120885
    8  43.6  0.0  0.0  chrY       125497  125622 (3541730) C  DM1731_I-int   LTR/Copia           (3522)  602    477 120885
   50   7.8  3.9  0.0  chrY       125637  125738 (3541614) C  S2_DM          DNA/TcMar-Tc1        (105) 1630   1525 120886
   99   3.1  3.0  1.5  chrY       125735  125866 (3541486) C  S2_DM          DNA/TcMar-Tc1       (1601)  134      1 120887
   13  10.5  6.5  0.0  chrY       126117  126147 (3541205) +  (ATTTTT)n      Simple_repeat            1   33    (0) 120888
  199  29.5 34.3  0.6  chrY       129235  130063 (3537289) +  IDEFIX_I-int   LTR/Gypsy               19 1124 (4504) 120889
  315  15.3  8.4 18.6  chrY       130163  130804 (3536548) +  Invader2_I-int LTR/Gypsy               37  623 (3969) 120890
   15  13.5  3.0  0.0  chrY       131495  131527 (3535825) +  A-rich         Low_complexity           1   34    (0) 120891
  208  36.7 17.1  3.1  chrY       131716  132452 (3534900) +  ACCORD_I-int   LTR/Gypsy             3885 5013 (1275) 120892
  198   0.6  0.0  0.0  chrY       132454  132628 (3534724) +  (AGAGAAG)n     Simple_repeat            1  175    (0) 120893
  528   0.2  0.0  0.5  chrY       132629  133054 (3534298) +  Stalker2_LTR   LTR/Gypsy                1  424    (0) 120894
 1367   6.0  0.4  0.1  chrY       133061  134201 (3533151) +  Stalker2_I-int LTR/Gypsy                1 1145 (6251) 120894
  571   0.9  0.0  0.4  chrY       134424  134886 (3532466) +  Stalker2_I-int LTR/Gypsy             1126 1586 (5810) 120894
 1898   0.1  0.5  0.0  chrY       135086  136526 (3530826) +  Stalker2_I-int LTR/Gypsy             1568 3015 (4381) 120894
  890   2.4  0.1  0.0  chrY       136542  137254 (3530098) +  Stalker2_I-int LTR/Gypsy             3356 4069 (3327) 120894
   81  31.3 19.9  1.3  chrY       137692  137953 (3529399) +  Copia_I-int    LTR/Copia             1161 1470 (3123) 120895
  404  20.4  7.2  1.1  chrY       137969  138508 (3528844) +  Copia_I-int    LTR/Copia             1707 2279 (2314) 120895
   55   9.1  0.4  0.0  chrY       148991  149078 (3518274) +  QUASIMODO_I-int LTR/Gypsy             5986 6060    (0) 120896
  820   0.9  0.3  0.5  chrY       149066  149724 (3517628) +  QUASIMODO_LTR  LTR/Gypsy                1  658    (0) 120896
  918   3.6  1.5  2.8  chrY       149736  150614 (3516738) C  IDEFIX_I-int   LTR/Gypsy           (1472) 4156   3289 120897
 1432   4.1  6.0  0.7  chrY       150613  151903 (3515449) C  IDEFIX_I-int   LTR/Gypsy           (2485) 3143   1785 120897
   71  12.0  0.0  0.0  chrY       151911  152010 (3515342) C  MICROPIA_I-int LTR/Gypsy           (2404) 2072   1973 120898
  205   1.6  1.4 16.8  chrY       152011  152230 (3515122) C  MICROPIA_LTR   LTR/Gypsy            (203)  273     83 120899
  574  10.9  0.1  0.1  chrY       152221  152911 (3514441) +  QUASIMODO_I-int LTR/Gypsy             5384 6060    (0) 120900
  830   1.1  0.3  0.0  chrY       152899  153554 (3513798) +  QUASIMODO_LTR  LTR/Gypsy                1  658    (0) 120900
  929   3.4  1.5  2.6  chrY       153566  154443 (3512909) C  IDEFIX_I-int   LTR/Gypsy           (1472) 4156   3289 120901
 3401   3.8  4.9  0.2  chrY       154442  157446 (3509906) C  IDEFIX_I-int   LTR/Gypsy           (2485) 3143      1 120901
  615   3.1  5.3  0.2  chrY       157899  158444 (3508908) C  IDEFIX_LTR     LTR/Gypsy              (0)  594     21 120902
   84  10.2  3.3  1.9  chrY       158454  158606 (3508746) +  (ATAAT)n       Simple_repeat            1  155    (0) 120903
  825   0.8  0.6  0.1  chrY       159752  160406 (3506946) +  QUASIMODO_LTR  LTR/Gypsy                1  658    (0) 120904
  314   2.5  0.0  0.4  chrY       160407  160648 (3506704) +  QUASIMODO_I-int LTR/Gypsy                1  241 (5819) 120904
 1759   6.8  0.6  0.4  chrY       160659  162286 (3505066) +  QUASIMODO_I-int LTR/Gypsy             1075 2705 (3355) 120904
 2912   7.1  2.9  0.0  chrY       162284  165326 (3502026) +  QUASIMODO_I-int LTR/Gypsy             2859 5988   (72) 120904
  475   2.8  4.1  0.0  chrY       165321  165712 (3501640) +  QUASIMODO_LTR  LTR/Gypsy              153  560   (98) 120905
 1035  21.9  5.3  1.4  chrY       165914  167258 (3500094) C  QUASIMODO_I-int LTR/Gypsy              (0) 6060   4665 120906
 1073  28.1  4.6  1.1  chrY       167301  169209 (3498143) C  QUASIMODO_I-int LTR/Gypsy           (1051) 4449   1779 120906
   11  34.1  1.2 10.7  chrY       169494  169575 (3497777) C  QUASIMODO_I-int LTR/Gypsy           (4306) 1754   1680 120906
  186  26.4  2.2  4.5  chrY       169586  169859 (3497493) C  QUASIMODO_I-int LTR/Gypsy           (4504) 1556   1289 120906
  391  29.4  3.3  2.1  chrY       169858  170372 (3496980) C  QUASIMODO_I-int LTR/Gypsy           (5161)  899    379 120906
  265   7.3  0.0  1.9  chrY       170583  170847 (3496505) +  QUASIMODO_LTR  LTR/Gypsy                1  260  (398) 120907
  100  23.0  2.4  4.6  chrY       170850  171095 (3496257) +  QUASIMODO_LTR  LTR/Gypsy              410  650    (8) 120907
   54   1.5  0.0  0.0  chrY       171112  171178 (3496174) +  IDEFIX_LTR     LTR/Gypsy                1   67  (527) 120908
  636   2.9  0.9  0.2  chrY       171175  171722 (3495630) +  IDEFIX_LTR     LTR/Gypsy               43  594    (0) 120908
   11  24.6  0.0  2.6  chrY       172005  172044 (3495308) +  A-rich         Low_complexity           1   39    (0) 120909
  687  11.0  1.8  2.8  chrY       172223  173067 (3494285) +  IDEFIX_I-int   LTR/Gypsy                1 1367 (4693) 120910
  642   8.2  1.5  1.9  chrY       173083  173745 (3493607) +  IDEFIX_I-int   LTR/Gypsy             1181 2133 (3927) 120910
 1083   3.9  5.8  0.3  chrY       173745  174723 (3492629) +  IDEFIX_I-int   LTR/Gypsy             2111 3143 (2485) 120910
  921   3.4  1.5  1.7  chrY       174722  175591 (3491761) +  IDEFIX_I-int   LTR/Gypsy             3289 4156 (1472) 120910
  815   0.3  1.5  0.3  chrY       175603  176252 (3491100) C  QUASIMODO_LTR  LTR/Gypsy              (0)  658      1 120911
 2089   8.2  0.2  0.0  chrY       176240  178393 (3488959) C  QUASIMODO_I-int LTR/Gypsy              (0) 6060   3917 120911
  670   5.4  0.0  0.0  chrY       178404  179068 (3488284) C  QUASIMODO_I-int LTR/Gypsy           (2546) 3514   2850 120911
 1848   6.3  0.1  0.5  chrY       179069  180750 (3486602) C  QUASIMODO_I-int LTR/Gypsy           (3320) 2740   1066 120911
 2403   7.5  1.5  0.0  chrY       180747  183281 (3484071) +  QUASIMODO_I-int LTR/Gypsy             3500 6060    (0) 120912
  496   0.7  2.7  0.0  chrY       183271  183681 (3483671) +  QUASIMODO_LTR  LTR/Gypsy                1  422  (236) 120913
   40   0.0  0.0  1.8  chrY       183690  183747 (3483605) +  QUASIMODO_LTR  LTR/Gypsy              601  657    (1) 120913
  446   3.8  2.7  0.0  chrY       183762  184208 (3483144) +  IDEFIX_I-int   LTR/Gypsy             4442 4900  (728) 120914
  351   2.9 13.5  0.2  chrY       184228  184604 (3482748) +  IDEFIX_I-int   LTR/Gypsy             5202 5628    (0) 120914
  628   2.7  5.9  0.2  chrY       184605  185166 (3482186) +  IDEFIX_LTR     LTR/Gypsy                1  594    (0) 120914
   16  33.8 13.0  1.5  chrY       185376  185498 (3481854) C  Gypsy3_LTR     LTR/Gypsy            (110)  288    152 120915
   57  31.5 14.8  0.0  chrY       185507  185668 (3481684) C  Gypsy6_I-int   LTR/Gypsy           (2500) 4512   4327 120916
   61  34.9 17.9  5.1  chrY       185662  186129 (3481223) C  NINJA_I-int    LTR/Pao             (2877) 3134   2610 120917
  167  10.8  0.3 37.9  chrY       186452  186734 (3480618) +  Gypsy8_LTR     LTR/Gypsy                1  206   (98) 120918
  384   7.4  6.1  0.2  chrY       186746  187109 (3480243) C  DMCR1A         LINE/CR1               (0) 4470   4084 120919
  167  10.8  0.3 37.9  chrY       187110  187392 (3479960) +  Gypsy8_LTR     LTR/Gypsy                1  206   (98) 120920
  587   3.6  8.3  0.0  chrY       187404  187930 (3479422) C  DMCR1A         LINE/CR1               (0) 4470   3900 120921
  104  32.3  9.7  0.8  chrY       188311  188672 (3478680) C  NINJA_I-int    LTR/Pao             (4483) 1528   1135 120917
 1262  10.0  4.4  1.3  chrY       188717  190094 (3477258) +  TC1_DM         DNA/TcMar-Tc1            1 2559 (1530) 120922
  222  15.9 21.3  0.0  chrY       192219  192551 (3474801) C  DNAREP1_DM     RC/Helitron           (77)  517    114 120923
  115  19.8 18.9  4.4  chrY       192545  192803 (3474549) +  DMCR1A         LINE/CR1              2092 2386 (2084) 120924
   87  18.2  2.0  2.0  chrY       192841  192986 (3474366) +  DNAREP1_DM     RC/Helitron            328  473  (121) 120925
   19  22.9  3.3  0.0  chrY       192986  193046 (3474306) +  DNAREP1_DM     RC/Helitron            384  446  (148) 120926
   58  20.6 17.4  0.7  chrY       193025  193156 (3474196) +  DMCR1A         LINE/CR1              2708 2861 (1609) 120924
   10  17.8  0.0  0.0  chrY       193409  193453 (3473899) C  Gypsy_I-int    LTR/Gypsy           (1308) 5199   5155 120927
  228  16.4  0.0  0.0  chrY       193455  193692 (3473660) C  Gypsy_I-int    LTR/Gypsy           (1702) 4805   4568 120927
 1427  11.7 12.9  0.9  chrY       193689  195144 (3472208) C  Gypsy_I-int    LTR/Gypsy           (1842) 4665   3037 120927
 1043  15.2 10.7  0.8  chrY       195144  196286 (3471066) C  Gypsy_I-int    LTR/Gypsy           (3665) 2842   1588 120927
   55  20.7 39.8  0.9  chrY       196278  196427 (3470925) C  Gypsy_I-int    LTR/Gypsy           (5306) 1201    967 120927
  135  17.4  6.0  0.0  chrY       196422  196605 (3470747) C  Gypsy_I-int    LTR/Gypsy           (5718)  789    595 120927
  773  25.3  6.5  2.1  chrY       196602  197636 (3469716) C  G_DM           LINE/Jockey            (1) 4345   3267 120928
  674  25.9 19.2  0.4  chrY       197681  198714 (3468638) C  G_DM           LINE/Jockey         (1587) 2759   1543 120929
  309  17.3  3.2  0.9  chrY       198713  199194 (3468158) +  HELENA_RT      LINE/Jockey           1023 1317    (0) 120930
  703  14.0  3.2  0.0  chrY       199195  199857 (3467495) +  Gypsy_I-int    LTR/Gypsy              567 1250 (5257) 120931
  514  10.8 14.5  0.0  chrY       199854  200391 (3466961) +  Gypsy_I-int    LTR/Gypsy             1664 2279 (4228) 120931
   52  39.9  0.0  0.5  chrY       200394  200607 (3466745) C  BS             LINE/Jockey         (1518) 3608   3396 120932
   97   1.7 13.3  0.5  chrY       200695  200875 (3466477) +  GA-rich        Low_complexity           1  204    (0) 120933
  357   0.0  0.0  0.0  chrY       203438  203742 (3463610) +  (AGAGA)n       Simple_repeat            1  305    (0) 120934
   35  33.6  5.5  4.0  chrY       203784  204003 (3463349) C  BS             LINE/Jockey         (4560)  566    344 120932
   32  22.9  1.2  1.2  chrY       204114  204197 (3463155) C  BS2            LINE/Jockey         (4473)  248    165 120935
  330  18.8  7.3  1.6  chrY       204226  204652 (3462700) C  Gypsy_LTR      LTR/Gypsy             (31)  451      1 120936
  930  10.9  7.2  0.4  chrY       204653  205526 (3461826) C  Gypsy_I-int    LTR/Gypsy            (421) 6086   5154 120937
 1098  11.9  7.6  0.0  chrY       205522  206524 (3460828) C  Gypsy_I-int    LTR/Gypsy           (2534) 3973   2895 120937
  237  15.4 12.8  1.6  chrY       206524  206835 (3460517) C  Gypsy_I-int    LTR/Gypsy           (3715) 2792   2476 120937
   70  32.9 20.7  0.0  chrY       206824  206987 (3460365) +  BS             LINE/Jockey           3263 3460 (1666) 120938
  594  11.2  5.5  0.0  chrY       206988  207533 (3459819) C  Gypsy_I-int    LTR/Gypsy           (3037) 3470   2895 120939
  237  15.4 12.8  1.6  chrY       207533  207844 (3459508) C  Gypsy_I-int    LTR/Gypsy           (3715) 2792   2476 120939
  233  23.6 10.5  0.2  chrY       207835  208430 (3458922) +  HELENA_RT      LINE/Jockey              4  316 (1001) 120940
   69   9.9 15.8  0.0  chrY       208442  208542 (3458810) +  HELENA_RT      LINE/Jockey            427  543  (774) 120940
  724  21.2 11.9  0.5  chrY       208625  209667 (3457685) +  G6_DM          LINE/Jockey            748 1872 (2474) 120941
  251  18.0 26.0  0.0  chrY       209913  210317 (3457035) +  DMCR1A         LINE/CR1              2112 2624 (1846) 120942
   15   6.7  0.0  0.0  chrY       210318  210347 (3457005) +  DNAREP1_DM     RC/Helitron              1   30  (564) 120943
   97  20.8  7.4  1.6  chrY       210385  210560 (3456792) +  DNAREP1_DM     RC/Helitron            262  447  (147) 120944
   55  20.7 19.0  0.0  chrY       210549  210669 (3456683) +  DMCR1A         LINE/CR1              2718 2861 (1609) 120942
  221  33.1 34.3  2.4  chrY       211873  212982 (3454370) +  Copia1-I_DM    LTR/Copia             1340 2797 (1327) 120945
  162  37.1 12.6  3.0  chrY       213055  213752 (3453600) +  BS             LINE/Jockey             75  837 (4289) 120946
  473   5.9  7.8  8.7  chrY       213915  214412 (3452940) +  Gypsy2-I_DM    LTR/Gypsy              150  643 (5902) 120947
 1078   5.6 12.8  0.9  chrY       214413  215561 (3451791) +  Gypsy2-I_DM    LTR/Gypsy              976 2261 (4284) 120947
   46   9.4  0.0  0.0  chrY       215564  215627 (3451725) +  Gypsy2-I_DM    LTR/Gypsy             2852 2915 (3630) 120947
  191   9.2  0.3  0.0  chrY       215619  215923 (3451429) +  Gypsy2-I_DM    LTR/Gypsy             3926 4102 (2443) 120947
  375   4.3  4.2  2.5  chrY       215927  216287 (3451065) +  ROVER-LTR_DM   LTR/Gypsy                1  367    (0) 120948
   47   7.6  1.5  0.0  chrY       216288  216353 (3450999) +  ROVER-I_DM     LTR/Gypsy                1   67 (6517) 120948
  516  26.1 20.0  0.7  chrY       216339  217129 (3450223) +  G_DM           LINE/Jockey            930 1871 (2475) 120949
  250  18.0 26.0  0.0  chrY       217376  217780 (3449572) +  DMCR1A         LINE/CR1              2112 2624 (1846) 120950
   15   6.7  0.0  0.0  chrY       217781  217810 (3449542) +  DNAREP1_DM     RC/Helitron              1   30  (564) 120951
   93  20.6  7.7  1.7  chrY       217852  218019 (3449333) +  DNAREP1_DM     RC/Helitron            266  443  (151) 120952
   58  19.8 19.0  0.0  chrY       218012  218132 (3449220) +  DMCR1A         LINE/CR1              2718 2861 (1609) 120950
   46  33.1 38.1  0.0  chrY       219321  219640 (3447712) +  Copia1-I_DM    LTR/Copia             1340 1781 (2343) 120953
   97  39.9  8.6  3.0  chrY       219652  219966 (3447386) +  Copia1-I_DM    LTR/Copia             2466 2797 (1327) 120953
  157  36.9 13.4  3.0  chrY       220039  220731 (3446621) +  BS             LINE/Jockey             75  837 (4289) 120954
  475   5.9  7.8  8.5  chrY       220894  221390 (3445962) +  Gypsy2-I_DM    LTR/Gypsy              150  643 (5902) 120955
 1077   5.4 12.9  0.9  chrY       221391  222538 (3444814) +  Gypsy2-I_DM    LTR/Gypsy              976 2260 (4285) 120955
   46   9.4  0.0  0.0  chrY       222542  222605 (3444747) +  Gypsy2-I_DM    LTR/Gypsy             2852 2915 (3630) 120955
  191   9.2  0.3  0.0  chrY       222597  222901 (3444451) +  Gypsy2-I_DM    LTR/Gypsy             3926 4102 (2443) 120955
  378   4.0  4.2  2.5  chrY       222905  223265 (3444087) +  ROVER-LTR_DM   LTR/Gypsy                1  367    (0) 120956
  345  19.7 13.3 11.2  chrY       223266  223950 (3443402) +  ROVER-I_DM     LTR/Gypsy                1  698 (5886) 120956
  507  28.0  9.8  4.0  chrY       223950  224883 (3442469) +  ROVER-I_DM     LTR/Gypsy              264 1250 (5334) 120957
 4025   9.1  0.9  0.9  chrY       224885  228689 (3438663) +  ROVER-I_DM     LTR/Gypsy             1511 5314 (1270) 120957
  594   9.3  4.5  0.8  chrY       228719  229327 (3438025) +  ROVER-I_DM     LTR/Gypsy             5990 6584    (0) 120957
  378   4.0  4.2  2.5  chrY       229296  229656 (3437696) +  ROVER-LTR_DM   LTR/Gypsy                1  367    (0) 120957
   47   7.6  1.5  0.0  chrY       229657  229722 (3437630) +  ROVER-I_DM     LTR/Gypsy                1   67 (6517) 120957
  516  26.1 18.6  0.8  chrY       229708  230490 (3436862) +  G_DM           LINE/Jockey            930 1851 (2495) 120958
  250  18.0 26.0  0.0  chrY       230744  231148 (3436204) +  DMCR1A         LINE/CR1              2112 2624 (1846) 120959
   14   0.0  0.0  0.0  chrY       231149  231174 (3436178) +  DNAREP1_DM     RC/Helitron              1   26  (568) 120960
   97  20.8  7.4  1.6  chrY       231216  231391 (3435961) +  DNAREP1_DM     RC/Helitron            262  447  (147) 120961
   55  20.7 19.0  0.0  chrY       231380  231500 (3435852) +  DMCR1A         LINE/CR1              2718 2861 (1609) 120959
  220  33.1 34.3  2.4  chrY       232700  233808 (3433544) +  Copia1-I_DM    LTR/Copia             1341 2797 (1327) 120962
  155  35.7 14.9  3.6  chrY       233876  234451 (3432901) +  BS             LINE/Jockey             75  713 (4413) 120963
  421   5.9  7.4  9.6  chrY       234521  234967 (3432385) +  Gypsy2-I_DM    LTR/Gypsy              206  643 (5902) 120964
  556   5.5 20.1  1.0  chrY       234968  235703 (3431649) +  Gypsy2-I_DM    LTR/Gypsy              976 1851 (4694) 120964
  416   5.1  0.3  0.0  chrY       235701  236056 (3431296) +  Gypsy2-I_DM    LTR/Gypsy             6100 6456   (89) 120964
  122  17.9  2.0  0.0  chrY       236035  236185 (3431167) +  Gypsy2-LTR_DM  LTR/Gypsy              182  335    (3) 120964
   48  26.7 18.5  0.0  chrY       236186  236313 (3431039) +  BS             LINE/Jockey            980 1132 (3994) 120963
  258  27.8  4.4  0.3  chrY       236320  236658 (3430694) +  BS             LINE/Jockey           1329 1681 (3445) 120963
   80  31.9  0.7  0.0  chrY       236903  237046 (3430306) +  BS             LINE/Jockey           1961 2105 (3021) 120963
  104  26.1 29.3  1.9  chrY       237169  237414 (3429938) +  BS             LINE/Jockey           2015 2326 (2800) 120963
 1299   8.8  1.8  1.0  chrY       237276  238658 (3428694) +  Gypsy2-I_DM    LTR/Gypsy             3088 4573 (1972) 120965
  108   8.0  0.0  0.0  chrY       238658  238770 (3428582) +  Gypsy2-I_DM    LTR/Gypsy             3990 4102 (2443) 120966
  626   1.6  0.0  0.4  chrY       238777  239284 (3428068) C  QUASIMODO_LTR  LTR/Gypsy              (0)  658    153 120967
  974  11.2  0.6  0.0  chrY       239258  240350 (3427002) C  QUASIMODO_I-int LTR/Gypsy             (47) 6013   4914 120968
  202   6.0  0.0  0.7  chrY       240865  241071 (3426281) +  Gypsy2-I_DM    LTR/Gypsy             3088 3352 (3193) 120969
 1306   5.7  2.0  0.0  chrY       241048  242121 (3425231) +  Gypsy2-I_DM    LTR/Gypsy             3488 4583 (1962) 120969
  814   9.4 11.6  3.3  chrY       242640  244041 (3423311) +  Gypsy2-I_DM    LTR/Gypsy             5107 6456   (89) 120969
  122  17.9  2.0  0.0  chrY       244020  244170 (3423182) +  Gypsy2-LTR_DM  LTR/Gypsy              182  335    (3) 120969
   42  27.3 19.5  0.0  chrY       244171  244291 (3423061) +  BS             LINE/Jockey            980 1125 (4001) 120970
  258  28.0  4.4  0.3  chrY       244303  244642 (3422710) +  BS             LINE/Jockey           1328 1681 (3445) 120970
   81  29.9  0.7  0.0  chrY       244887  245030 (3422322) +  BS             LINE/Jockey           1961 2105 (3021) 120970
   61  26.8  7.1  3.8  chrY       245153  245307 (3422045) +  BS             LINE/Jockey           2015 2174 (2952) 120970
  192   8.6  0.0  0.7  chrY       245335  245541 (3421811) +  Gypsy2-I_DM    LTR/Gypsy             3069 3352 (3193) 120971
  711   5.4  4.1  0.0  chrY       245519  246109 (3421243) +  Gypsy2-I_DM    LTR/Gypsy             3488 4102 (2443) 120971
 1506   7.7 11.0  2.9  chrY       246119  248126 (3419226) +  Gypsy2-I_DM    LTR/Gypsy             4450 6456   (89) 120971
   24  15.6 11.1  0.0  chrY       248104  248148 (3419204) +  Gypsy2-LTR_DM  LTR/Gypsy              181  230  (108) 120971
  793  33.6 10.4  4.5  chrY       248527  250729 (3416623) C  GTWIN_I-int    LTR/Gypsy           (1774) 4647   2319 120972
  337  27.3  6.1  5.5  chrY       251772  252282 (3415070) C  GTWIN_I-int    LTR/Gypsy           (4348) 1367    854 120972
  239  12.7  6.0  1.3  chrY       253172  253473 (3413879) +  ACCORD2_I-int  LTR/Gypsy              456  771 (6441) 120973
  284  15.6 37.6  1.2  chrY       253441  253882 (3413470) +  ACCORD2_I-int  LTR/Gypsy              965 1565 (5647) 120973
  622   5.5  4.1  6.6  chrY       253883  254490 (3412862) +  IDEFIX_LTR     LTR/Gypsy                1  594    (0) 120974
  674   7.8  0.2  0.3  chrY       254938  255604 (3411748) +  IDEFIX_I-int   LTR/Gypsy                1  944 (5116) 120975
   39   6.5  0.0  0.0  chrY       255605  255666 (3411686) +  IDEFIX_I-int   LTR/Gypsy              717  778 (4850) 120975
  563   5.5  0.0  0.0  chrY       255660  256185 (3411167) C  DM412          LTR/Gypsy            (598) 5879   5354 120976
  260   5.9  3.2  0.0  chrY       256212  256464 (3410888) +  IDEFIX_I-int   LTR/Gypsy              560  820 (4808) 120977
  763   5.8  9.6  1.1  chrY       256472  257857 (3409495) +  IDEFIX_I-int   LTR/Gypsy              959 2461 (3167) 120977
  330  16.5  2.6  0.9  chrY       257828  258256 (3409096) C  DM412B_LTR     LTR/Gypsy            (105)  466     31 120978
 1939   6.4  5.7  0.8  chrY       258277  260151 (3407201) C  DM412          LTR/Gypsy             (63) 6414   4449 120979
 2705   6.7  0.0  0.0  chrY       260252  262642 (3404710) C  Copia_I-int    LTR/Copia           (2201) 2392      1 120980
  314   1.4  0.0  0.0  chrY       262643  262918 (3404434) C  Copia_LTR      LTR/Copia              (0)  276      1 120980
  528  33.6  1.6  0.3  chrY       262919  264200 (3403152) +  HMSBEAGLE_I-int LTR/Gypsy             3822 5120 (1409) 120981
  121  34.9  6.2  6.9  chrY       264210  265084 (3402268) +  Gypsy2-I_DM    LTR/Gypsy             4917 5785  (760) 120982
  195   0.6  0.0  0.0  chrY       265085  265248 (3402104) +  Bica_LTR       LTR/Gypsy                1  164    (0) 120983
 3571   0.9  0.5  0.4  chrY       265249  268076 (3399276) +  Bica_I-int     LTR/Gypsy                1 2967 (1811) 120983
  193   0.6  0.0  0.0  chrY       268068  268232 (3399120) +  Bica_I-int     LTR/Gypsy             4613 4777    (1) 120983
  195   0.6  0.0  0.0  chrY       268233  268396 (3398956) +  Bica_LTR       LTR/Gypsy                1  164    (0) 120983
  988   1.0  0.6  0.0  chrY       268397  269273 (3398079) +  Bica_I-int     LTR/Gypsy                1 1018 (3760) 120983
   20   0.0  0.0  0.0  chrY       269303  269342 (3398010) C  BARI1          DNA/TcMar-Tc1       (1649)   40      1 120984
  567   2.8 11.9  1.0  chrY       269311  269846 (3397506) +  IDEFIX_LTR     LTR/Gypsy                1  594    (0) 120985
   13  21.8  0.0  4.5  chrY       270118  270163 (3397189) +  A-rich         Low_complexity           1   44    (0) 120986
  839   6.8  3.1  0.5  chrY       270294  271105 (3396247) +  IDEFIX_I-int   LTR/Gypsy                1  994 (5066) 120987
  563   5.5  0.0  0.0  chrY       271099  271624 (3395728) C  DM412          LTR/Gypsy            (598) 5879   5354 120988
  261   5.9  3.2  0.0  chrY       271651  271903 (3395449) +  IDEFIX_I-int   LTR/Gypsy              560  820 (4808) 120989
  769   5.8  9.5  1.1  chrY       271911  273297 (3394055) +  IDEFIX_I-int   LTR/Gypsy              959 2461 (3167) 120989
  330  16.5  2.6  0.9  chrY       273268  273696 (3393656) C  DM412B_LTR     LTR/Gypsy            (105)  466     31 120990
 3118   6.2  3.7  1.0  chrY       273717  276635 (3390717) C  DM412          LTR/Gypsy             (63) 6414   3419 120991
  563   3.0 11.9  1.0  chrY       276648  277183 (3390169) +  IDEFIX_LTR     LTR/Gypsy                1  594    (0) 120992
   13  21.8  0.0  4.5  chrY       277432  277477 (3389875) +  A-rich         Low_complexity           1   44    (0) 120993
  591  13.0  3.5  1.3  chrY       277606  278524 (3388828) +  IDEFIX_I-int   LTR/Gypsy                1 1485 (4575) 120994
    2  41.4  3.0  1.0  chrY       279311  279410 (3387942) C  Gypsy_I-int    LTR/Gypsy            (834) 4152   4051 120995
  226   0.0  0.0  0.0  chrY       279506  279697 (3387655) C  CIRCE          LTR/Gypsy           (1376) 4980   4789 120996
  489   1.7 19.3  0.6  chrY       279696  280325 (3387027) C  CIRCE          LTR/Gypsy           (2094) 4262   3515 120996
  102  46.5 12.7  2.5  chrY       281002  282064 (3385288) C  Gypsy_I-int    LTR/Gypsy           (2134) 4154   2268 120995
   17  16.1  0.0  0.0  chrY       283774  283808 (3383544) +  (TTTA)n        Simple_repeat            1   35    (0) 120997
  379   4.0  3.9  2.7  chrY       284309  284671 (3382681) +  ROVER-LTR_DM   LTR/Gypsy                1  367    (0) 120998
  285  13.0  5.5 18.3  chrY       284672  285124 (3382228) +  ROVER-I_DM     LTR/Gypsy                1  404 (6180) 120998
 2053  13.0  0.9  0.8  chrY       285228  287234 (3380118) C  Gypsy_I-int    LTR/Gypsy           (4385) 2122      1 120995
  526  10.2  0.4  0.2  chrY       287235  287715 (3379637) C  Gypsy_LTR      LTR/Gypsy              (0)  482      1 120995
  356   2.0  0.3  6.8  chrY       287716  288029 (3379323) C  MAX_I-int      LTR/Pao             (7619)  295      1 120999
  347   2.7  7.4  0.0  chrY       288030  288328 (3379024) C  MAX_LTR        LTR/Pao                (0)  321      1 120999
 2765   1.7  3.9  1.3  chrY       288338  291150 (3376202) C  MAX_I-int      LTR/Pao                (2) 7912   5025 120999
  700   2.7  0.0  0.0  chrY       291152  291748 (3375604) C  MAX_I-int      LTR/Pao             (3028) 4886   4290 120999
 1141   1.4  4.7  0.0  chrY       291746  292644 (3374708) C  MAX_I-int      LTR/Pao             (4095) 3819   2879 120999
    3  43.0  0.0  0.0  chrY       292669  292768 (3374584) C  QUASIMODO_I-int LTR/Gypsy           (3352) 2148   2049 121000
   99  44.4  5.1  1.0  chrY       293129  293617 (3373735) C  QUASIMODO_I-int LTR/Gypsy           (5101)  959    451 121000
   14  18.3  2.7  0.0  chrY       293638  293674 (3373678) +  (TTTTAG)n      Simple_repeat            1   38    (0) 121001
  181   7.9  7.9  0.0  chrY       295204  295381 (3371971) C  DIVER2_I-int   LTR/Pao             (3955)  192      1 121002
  488   1.6  0.0  0.0  chrY       295382  295766 (3371586) C  DIVER2_LTR     LTR/Pao                (0)  385      1 121002
  115  15.2  6.5 14.9  chrY       296142  296373 (3370979) C  ACCORD2_LTR    LTR/Gypsy              (0)  215      1 121003
  169  38.5 18.8  5.2  chrY       296410  298100 (3369252) C  QUASIMODO_I-int LTR/Gypsy           (3751) 2309    452 121004
  178   8.4  7.9  0.0  chrY       299640  299817 (3367535) C  DIVER2_I-int   LTR/Pao             (3955)  192      1 121005
  488   1.6  0.0  0.0  chrY       299818  300202 (3367150) C  DIVER2_LTR     LTR/Pao                (0)  385      1 121005
  115  15.2  6.5 14.9  chrY       300578  300809 (3366543) C  ACCORD2_LTR    LTR/Gypsy              (0)  215      1 121006
   12  32.8  0.0 10.4  chrY       300823  300907 (3366445) C  QUASIMODO_I-int LTR/Gypsy           (3881) 2179   2103 121007
   13  15.9  2.7  2.7  chrY       300917  300953 (3366399) +  (TATCATG)n     Simple_repeat            1   37    (0) 121008
   12  40.5 11.6  5.2  chrY       300954  301414 (3365938) C  QUASIMODO_I-int LTR/Gypsy           (4571) 1489   1392 121009
   98  44.4  5.1  1.0  chrY       301775  302263 (3365089) C  QUASIMODO_I-int LTR/Gypsy           (5101)  959    451 121009
   14  18.3  2.7  0.0  chrY       302284  302320 (3365032) +  (TTTTAG)n      Simple_repeat            1   38    (0) 121010
   75   6.7  4.4  2.1  chrY       303831  303921 (3363431) C  DNAREP1_DM     RC/Helitron          (499)   95      3 121011
  877  13.5 10.7  0.4  chrY       303932  304910 (3362442) C  IDEFIX_I-int   LTR/Gypsy            (371) 5257   4178 121012
   12  18.2  0.0  0.0  chrY       304917  304971 (3362381) C  IDEFIX_I-int   LTR/Gypsy           (2273) 3355   3301 121012
  114  12.8  0.0  0.0  chrY       304968  305108 (3362244) C  IDEFIX_I-int   LTR/Gypsy           (2583) 3045   2905 121012
 1466   7.5  7.5  0.4  chrY       305108  306452 (3360900) C  DMRT1C         LINE/R1                (2) 5441   4002 121013
   98  10.1  0.0  1.7  chrY       306446  306572 (3360780) C  DMRT1C         LINE/R1             (1702) 3741   3628 121013
   46   1.5 13.4  0.0  chrY       306565  306631 (3360721) C  DMRT1C         LINE/R1             (3195) 2248   2173 121014
  233   7.9  4.2  0.0  chrY       306629  306844 (3360508) C  DMRT1C         LINE/R1             (3207) 2236   2012 121015
  159   8.0  0.0  0.0  chrY       306866  307027 (3360325) C  DMRT1C         LINE/R1             (4365) 1078    917 121015
  239  14.6 20.0  0.0  chrY       307025  307319 (3360033) C  IDEFIX_I-int   LTR/Gypsy           (4224) 1404   1051 121016
  490   9.7  8.4  4.4  chrY       307486  308056 (3359296) C  IDEFIX_LTR     LTR/Gypsy              (0)  594      2 121017
   23  29.8  2.4  1.2  chrY       308145  308229 (3359123) +  Copia_I-int    LTR/Copia             4427 4512   (81) 121018
  199  20.6 14.9  0.0  chrY       309338  309619 (3357733) +  MICROPIA_I-int LTR/Gypsy              241  564 (3912) 121019
  256  25.4  8.2  0.3  chrY       309627  310271 (3357081) +  MICROPIA_I-int LTR/Gypsy              909 2108 (2368) 121019
  455  20.3 23.8  0.8  chrY       310269  310983 (3356369) +  MICROPIA_I-int LTR/Gypsy             2546 3345 (1131) 121019
   15  21.8  1.4  4.3  chrY       311062  311133 (3356219) +  G5_DM          LINE/Jockey            406  475 (4381) 121020
   15  19.8  2.0  4.1  chrY       311911  311969 (3355383) +  (TAATAT)n      Simple_repeat            1   57    (0) 121021
   12  18.9  7.1  0.0  chrY       312197  312238 (3355114) +  (TTATAT)n      Simple_repeat            1   45    (0) 121022
 1723  32.3  6.6  3.0  chrY       312395  315665 (3351687) C  ZAM_I-int      LTR/Gypsy           (1612) 5878   2496 121023
   21   6.8  3.2  0.0  chrY       315966  315996 (3351356) +  (AT)n          Simple_repeat            1   32    (0) 121024
  490   1.5  0.5  0.0  chrY       316467  316857 (3350495) +  Invader6_LTR   LTR/Gypsy                1  393    (0) 121025
   20  20.5  0.0  0.0  chrY       316864  316902 (3350450) +  (T)n           Simple_repeat            1   39    (0) 121026
   13  20.8  0.0  0.0  chrY       317353  317385 (3349967) +  (TTTAT)n       Simple_repeat            1   33    (0) 121027
  256   0.9  8.0  0.0  chrY       317494  317718 (3349634) +  Invader6_LTR   LTR/Gypsy                1  243  (150) 121028
 1420  32.2  3.3  3.2  chrY       317715  320886 (3346466) C  ZAM_I-int      LTR/Gypsy            (730) 6482   2496 121029
   16   4.5  4.3  0.0  chrY       321187  321209 (3346143) +  (AT)n          Simple_repeat            1   24    (0) 121030
   16  23.3  0.0  0.0  chrY       321657  321691 (3345661) +  (T)n           Simple_repeat            1   35    (0) 121031
   13  15.9  0.0  0.0  chrY       322143  322170 (3345182) +  (TTTAT)n       Simple_repeat            1   28    (0) 121032
  246   0.5  8.4  0.0  chrY       322284  322498 (3344854) +  Invader6_LTR   LTR/Gypsy                1  233  (160) 121033
 1063   1.9  0.3  8.8  chrY       322521  324141 (3343211) +  (ACAATAG)n     Simple_repeat            1 1495    (0) 121034
  322  23.3 14.5  0.0  chrY       324193  324320 (3343032) +  G5_DM          LINE/Jockey           1079 1215 (3641) 121035
   28   0.0  5.9  0.0  chrY       324321  324354 (3342998) +  (TATAAAA)n     Simple_repeat            1   36    (0) 121036
  322  23.3 14.5  0.0  chrY       324355  324762 (3342590) +  G5_DM          LINE/Jockey           1216 1692 (3164) 121035
  495   3.4 15.3  0.0  chrY       324771  325536 (3341816) +  G5A_DM         LINE/Jockey            227 1109 (1691) 121037
 1659   4.9  3.0  1.5  chrY       325538  326975 (3340377) +  G5A_DM         LINE/Jockey           1262 2720   (80) 121037
  310  12.9 14.5  0.2  chrY       326973  327338 (3340014) C  IDEFIX_I-int   LTR/Gypsy           (1015) 4613   4196 121038
  812  13.9 19.6  0.2  chrY       327339  329073 (3338279) C  IDEFIX_I-int   LTR/Gypsy           (2633) 2995    688 121038
  603  20.1  4.4  2.4  chrY       329071  329836 (3337516) C  IDEFIX_I-int   LTR/Gypsy           (4846)  782      2 121038
  341  14.2  9.8  9.6  chrY       330135  330646 (3336706) C  IDEFIX_LTR     LTR/Gypsy              (7)  587     75 121038
 1934  10.9 14.6  0.0  chrY       330642  332788 (3334564) C  DMRT1B         LINE/R1                (0) 5183   2725 121039
 1014  11.8 14.3  0.1  chrY       332807  334682 (3332670) C  DMRT1B         LINE/R1             (2607) 2576    434 121039
   30  19.7 11.1  1.3  chrY       334687  334758 (3332594) C  DMRT1B         LINE/R1             (4965)  218    140 121039
   20  24.7 59.1  0.0  chrY       334886  335071 (3332281) +  DMCR1A         LINE/CR1              4173 4468    (2) 121040
   17  20.3  2.4  2.4  chrY       335247  335288 (3332064) +  (AT)n          Simple_repeat            1   42    (0) 121041
   23  29.3  1.0  3.2  chrY       336063  336159 (3331193) +  A-rich         Low_complexity           1   95    (0) 121042
  308   3.0  0.3  9.0  chrY       337588  337877 (3329475) C  MDG3_LTR       LTR/Gypsy              (0)  267      1 121043
 5821   2.7  1.7  0.2  chrY       337878  342790 (3324562) C  MDG3_I-int     LTR/Gypsy              (0) 4986      1 121043
   72  14.4  1.0  0.0  chrY       342790  342886 (3324466) C  MDG3_LTR       LTR/Gypsy              (0)  267    170 121043
 1243  11.3 12.3  0.1  chrY       342862  344052 (3323300) C  DMRT1B         LINE/R1              (308) 4875   3539 121044
   25  10.0  0.0  0.0  chrY       344062  344111 (3323241) C  DMRT1B         LINE/R1             (1844) 3339   3290 121044
  965  14.5 12.6  0.2  chrY       344108  345917 (3321435) C  DMRT1B         LINE/R1             (2672) 2511    434 121044
   26  19.1 11.6  1.3  chrY       345926  345994 (3321358) C  DMRT1B         LINE/R1             (4969)  214    139 121044
   29  24.5 58.0  0.0  chrY       346120  346307 (3321045) +  DMCR1A         LINE/CR1              4172 4468    (2) 121045
   17  20.3  2.4  2.4  chrY       346481  346522 (3320830) +  (AT)n          Simple_repeat            1   42    (0) 121046
   23  31.0  0.0  3.2  chrY       347297  347393 (3319959) +  A-rich         Low_complexity           1   94    (0) 121047
  308   3.0  0.3  9.0  chrY       348822  349111 (3318241) C  MDG3_LTR       LTR/Gypsy              (0)  267      1 121048
  510   3.3 12.9  0.2  chrY       349112  349629 (3317723) C  MDG3_I-int     LTR/Gypsy              (0) 4986   4403 121048
  474   1.2  1.6  2.0  chrY       349630  350133 (3317219) +  (TTATATA)n     Simple_repeat            1  502    (0) 121049
  506   0.4  0.7  0.4  chrY       352784  353242 (3314110) +  (ATATTAT)n     Simple_repeat            1  460    (0) 121050
  400   0.0  0.6  0.0  chrY       353343  353690 (3313662) +  (ATATATT)n     Simple_repeat            1  350    (0) 121051
 3281   1.9  0.0  0.0  chrY       353691  356121 (3311231) +  BS2            LINE/Jockey           2291 4721    (0) 121052
   24   3.5  0.0  0.0  chrY       356128  356156 (3311196) +  (A)n           Simple_repeat            1   29    (0) 121053
   22  30.7 26.8  0.0  chrY       356166  356318 (3311034) +  DNAREP1_DM     RC/Helitron            208  401  (193) 121054
   97  12.8  0.0  0.8  chrY       357104  357229 (3310123) C  DNAREP1_DM     RC/Helitron           (32)  562    438 121055
   88  23.7 21.9  0.3  chrY       357231  357463 (3309889) C  DNAREP1_DM     RC/Helitron          (110)  484    202 121056
   13  17.2  4.9  2.4  chrY       357728  357768 (3309584) +  (TTATA)n       Simple_repeat            1   42    (0) 121057
  685  18.3  1.0  0.4  chrY       358103  358817 (3308535) +  Copia_I-int    LTR/Copia             1561 2279 (2314) 121058
  986   3.6  0.0  0.2  chrY       359065  359919 (3307433) +  TRANSIB2       DNA/CMC-Transib          1  853 (1991) 121059
  754   0.8  0.5  1.0  chrY       359919  360532 (3306820) +  TRANSIB2       DNA/CMC-Transib       2234 2844    (0) 121060
  389  31.6  5.2  0.9  chrY       360533  361144 (3306208) +  Copia_I-int    LTR/Copia             2726 3363 (1230) 121058
  366  18.4 13.6  2.5  chrY       361145  361717 (3305635) C  QUASIMODO_LTR  LTR/Gypsy             (19)  639      5 121061
    3  20.8  3.8  0.0  chrY       361707  361759 (3305593) +  Copia_I-int    LTR/Copia             3362 3416 (1177) 121058
   67  26.0 19.0  0.0  chrY       361784  361961 (3305391) +  Invader6_I-int LTR/Gypsy              874 1127 (2059) 121062
   80  34.5 14.8  0.0  chrY       361976  362198 (3305154) +  Invader6_I-int LTR/Gypsy             1368 1623 (2476) 121062
   14  14.0  0.0  4.7  chrY       362216  362260 (3305092) +  Invader6_I-int LTR/Gypsy             1981 2023 (1311) 121062
  736  11.8 23.4 13.2  chrY       362261  363240 (3304112) +  Invader5_I-int LTR/Gypsy             1788 2855  (479) 121063
   61  17.0 45.0 10.1  chrY       363245  363426 (3303926) +  Invader5_I-int LTR/Gypsy             2800 3046  (288) 121063
   97  17.8  1.3  2.7  chrY       363437  363586 (3303766) +  Invader5_LTR   LTR/Gypsy               85  232  (120) 121064
  135  24.9 16.7  0.7  chrY       363626  363876 (3303476) +  Invader5_I-int LTR/Gypsy             3201 3491 (2569) 121063
   86  21.4  4.1  2.3  chrY       363904  364075 (3303277) C  R1_DM          LINE/R1              (607) 4749   4575 121065
  659  12.7 27.3  1.4  chrY       364120  364968 (3302384) C  R1_DM          LINE/R1             (1418) 3938   2873 121065
   25   8.8  0.0  0.0  chrY       364970  365037 (3302315) C  R1_DM          LINE/R1             (3354) 2002   1935 121065
  219  19.1 33.9  0.1  chrY       365048  365646 (3301706) C  R1_DM          LINE/R1             (3536) 1820   1020 121065
   71  14.0 22.4  1.4  chrY       365655  365770 (3301582) C  DNAREP1_DM     RC/Helitron          (426)  168     29 121066
   57  27.0  9.2  0.0  chrY       365769  365920 (3301432) +  QUASIMODO_I-int LTR/Gypsy             3326 3491 (2569) 121067
  245  15.0 33.2  5.4  chrY       365955  366762 (3300590) +  PROTOP_B       DNA/P                   10  962  (191) 121068
  121   4.3  0.0  0.0  chrY       366766  366881 (3300471) +  PROTOP_B       DNA/P                 1038 1153    (0) 121069
  210  33.3  6.3  4.8  chrY       366901  367373 (3299979) +  Chouto_I-int   LTR/Gypsy              894 1373 (4342) 121070
   15   7.8  0.0  6.9  chrY       367456  367486 (3299866) +  (AAT)n         Simple_repeat            1   29    (0) 121071
  178  20.0  8.9  0.9  chrY       367817  368109 (3299243) C  R1_DM          LINE/R1              (466) 4890   4575 121072
  336   9.3  4.7  1.9  chrY       368154  368514 (3298838) C  R1_DM          LINE/R1             (1418) 3938   3568 121073
  155  20.0 38.2  0.1  chrY       368518  369007 (3298345) C  R1_DM          LINE/R1             (3661) 1695   1020 121072
   71  14.0 22.4  1.4  chrY       369016  369131 (3298221) C  DNAREP1_DM     RC/Helitron          (426)  168     29 121074
   57  27.0  9.2  0.0  chrY       369130  369281 (3298071) +  QUASIMODO_I-int LTR/Gypsy             3326 3491 (2569) 121075
  245  15.0 33.2  5.4  chrY       369316  370123 (3297229) +  PROTOP_B       DNA/P                   10  962  (191) 121076
  121   4.3  0.0  0.0  chrY       370127  370242 (3297110) +  PROTOP_B       DNA/P                 1038 1153    (0) 121077
  208  33.6  6.4  4.8  chrY       370262  370733 (3296619) +  Chouto_I-int   LTR/Gypsy              894 1372 (4343) 121078
   15   7.8  0.0  6.9  chrY       370817  370847 (3296505) +  (AAT)n         Simple_repeat            1   29    (0) 121079
  178  20.0  8.9  0.9  chrY       371178  371470 (3295882) C  R1_DM          LINE/R1              (466) 4890   4575 121080
  663  13.2 25.7  1.0  chrY       371515  372371 (3294981) C  R1_DM          LINE/R1             (1418) 3938   2873 121080
   25   8.8  0.0  0.0  chrY       372373  372440 (3294912) C  R1_DM          LINE/R1             (3354) 2002   1935 121080
  216  19.5 33.8  0.1  chrY       372451  373050 (3294302) C  R1_DM          LINE/R1             (3536) 1820   1019 121080
   68  14.9 22.4  1.4  chrY       373058  373173 (3294179) C  DNAREP1_DM     RC/Helitron          (426)  168     29 121081
   57  27.0  9.2  0.0  chrY       373172  373323 (3294029) +  QUASIMODO_I-int LTR/Gypsy             3326 3491 (2569) 121082
  245  15.1 33.2  5.4  chrY       373358  374165 (3293187) +  PROTOP_B       DNA/P                   10  962  (191) 121083
  121   4.3  0.0  0.0  chrY       374169  374284 (3293068) +  PROTOP_B       DNA/P                 1038 1153    (0) 121084
  213  33.3  7.1  4.2  chrY       374304  374770 (3292582) +  Chouto_I-int   LTR/Gypsy              894 1373 (4342) 121085
   15   7.8  0.0  6.9  chrY       374853  374883 (3292469) +  (AAT)n         Simple_repeat            1   29    (0) 121086
   15  32.4  1.3  2.7  chrY       374994  375069 (3292283) +  (AAT)n         Simple_repeat            1   75    (0) 121087
  177  20.3  8.9  0.9  chrY       375214  375506 (3291846) C  R1_DM          LINE/R1              (466) 4890   4575 121088
  662  13.2 25.7  1.0  chrY       375551  376407 (3290945) C  R1_DM          LINE/R1             (1418) 3938   2873 121088
   25   9.0  0.0  0.0  chrY       376410  376476 (3290876) C  R1_DM          LINE/R1             (3355) 2001   1935 121088
  217  19.4 33.8  0.1  chrY       376487  377086 (3290266) C  R1_DM          LINE/R1             (3536) 1820   1019 121088
  279  13.1 28.8  0.9  chrY       377107  377207 (3290145) +  Gypsy11_LTR    LTR/Gypsy               10  171  (281) 121089
   29   0.0  3.2  0.0  chrY       377208  377238 (3290114) +  (CATA)n        Simple_repeat            1   32    (0) 121090
  279  13.1 28.8  0.9  chrY       377239  377483 (3289869) +  Gypsy11_LTR    LTR/Gypsy              172  451    (1) 121089
 1162  10.2 10.0  6.6  chrY       377486  378645 (3288707) +  Gypsy11_I-int  LTR/Gypsy                9 1205 (2319) 121089
  119  14.9  0.5  0.5  chrY       378633  378889 (3288463) +  STALKER4_I-int LTR/Gypsy             5358 5843  (687) 121091
   15  18.1  2.6  0.0  chrY       378952  378989 (3288363) +  (GCCTTT)n      Simple_repeat            1   39    (0) 121092
   18  25.8  2.7  2.7  chrY       379633  379670 (3287682) +  A-rich         Low_complexity           1   69    (0) 121093
   19  14.2  0.0  0.0  chrY       379671  379701 (3287651) +  (A)n           Simple_repeat            1   31    (0) 121094
  580  14.4 20.5  5.4  chrY       380246  381261 (3286091) +  Gypsy12_LTR    LTR/Gypsy               10 1213 (1123) 121095
  491   9.3 10.0  3.8  chrY       381265  381832 (3285520) +  Gypsy12_LTR    LTR/Gypsy             1735 2336    (0) 121095
   13  25.0  0.0  4.4  chrY       382008  382054 (3285298) +  A-rich         Low_complexity           1   45    (0) 121096
  913  34.3  6.2  3.9  chrY       382146  384419 (3282933) +  GTWIN_I-int    LTR/Gypsy             2319 4643 (1778) 121097
    1  17.9  0.0  0.0  chrY       385015  385042 (3282310) +  NOMAD_I-int    LTR/Gypsy             5960 5987  (585) 121098
    2  34.1  9.1  0.0  chrY       385247  385334 (3282018) +  Gypsy9_I-int   LTR/Gypsy             3828 3923  (754) 121099
   96   5.6  0.8  0.0  chrY       386287  386411 (3280941) C  DMCR1A         LINE/CR1             (146) 4324   4199 121100
  893   4.8  2.5  0.0  chrY       386407  387171 (3280181) C  DMCR1A         LINE/CR1             (551) 3919   3136 121100
  667   5.1  1.5  0.3  chrY       387188  387778 (3279574) C  DMCR1A         LINE/CR1            (1521) 2949   2352 121100
  502  33.5 13.4  4.2  chrY       387906  389134 (3278218) C  QUASIMODO_I-int LTR/Gypsy           (4305) 1755    418 121101
   21  23.3  0.0  0.0  chrY       389226  389270 (3278082) +  (T)n           Simple_repeat            1   45    (0) 121102
   64  23.6 20.8  0.6  chrY       389721  389869 (3277483) C  MAX_I-int      LTR/Pao              (915) 6999   6821 121103
  102  14.2 18.7  0.0  chrY       389882  390015 (3277337) C  MAX_I-int      LTR/Pao             (1206) 6708   6550 121103
  200  15.1 10.0  0.8  chrY       390026  390266 (3277086) C  MAX_I-int      LTR/Pao             (1657) 6257   5995 121103
   27  18.8  8.7  0.0  chrY       390301  390369 (3276983) C  MAX_I-int      LTR/Pao             (4484) 3430   3356 121103
  136  15.2 10.7  3.3  chrY       390398  390594 (3276758) C  MAX_I-int      LTR/Pao             (5210) 2704   2494 121103
  307  16.0  5.5  0.0  chrY       390865  391226 (3276126) +  FW2_DM         LINE/Jockey           1174 1555 (2406) 121104
  195  13.1  0.6  3.8  chrY       391235  391477 (3275875) +  FW2_DM         LINE/Jockey           3085 3295  (666) 121105
  375  33.2  5.5 14.0  chrY       391480  392275 (3275077) +  Copia_I-int    LTR/Copia              905 1641 (2952) 121106
  165  20.2  1.5  1.5  chrY       392276  392481 (3274871) +  Copia_I-int    LTR/Copia             2053 2258 (2335) 121106
   67  30.9 10.2  5.6  chrY       392954  393090 (3274262) +  Copia_I-int    LTR/Copia             1095 1237 (3356) 121107
  398   4.7  4.0  0.2  chrY       393093  393494 (3273858) +  DIVER2_I-int   LTR/Pao                688 1104 (3043) 121108
  116  39.8 16.2  2.2  chrY       394125  394525 (3272827) +  DIVER2_I-int   LTR/Pao               1907 2362 (1785) 121108
   60  45.0  2.5  2.2  chrY       395223  395538 (3271814) +  DIVER2_I-int   LTR/Pao               2658 2974 (1173) 121108
  112   5.8 31.4  0.0  chrY       395529  395684 (3271668) +  DMCR1A         LINE/CR1              1078 1282 (3188) 121109
 2025   5.0  5.1  0.1  chrY       395685  397342 (3270010) C  Gypsy2-I_DM    LTR/Gypsy           (2773) 3772   2033 121110
  324   5.1  1.4  0.0  chrY       397352  397643 (3269709) C  Gypsy2-I_DM    LTR/Gypsy           (4908) 1637   1342 121110
  372   5.5 26.8  0.2  chrY       397649  398148 (3269204) C  Gypsy2-I_DM    LTR/Gypsy           (5320) 1225    593 121110
  265  10.4 14.1  0.0  chrY       398149  398418 (3268934) C  Gypsy2-LTR_DM  LTR/Gypsy             (30)  308      1 121110
  266   4.3  1.6  1.2  chrY       398426  398683 (3268669) +  DMCR1A         LINE/CR1              1624 1882 (2588) 121109
  435   6.1  0.0  0.0  chrY       398672  399064 (3268288) C  DMCR1A         LINE/CR1             (942) 3528   3136 121111
  667   5.1  1.5  0.3  chrY       399081  399671 (3267681) C  DMCR1A         LINE/CR1            (1521) 2949   2352 121111
  507  32.9 14.3  4.6  chrY       399799  401040 (3266312) C  QUASIMODO_I-int LTR/Gypsy           (4305) 1755    399 121112
   67  23.3 20.5  0.6  chrY       401617  401767 (3265585) C  MAX_I-int      LTR/Pao              (915) 6999   6819 121113
  102  14.2 18.7  0.0  chrY       401778  401911 (3265441) C  MAX_I-int      LTR/Pao             (1206) 6708   6550 121113
  207  15.7  8.6  0.8  chrY       401922  402165 (3265187) C  MAX_I-int      LTR/Pao             (1657) 6257   5995 121113
   85  17.8  4.6  0.7  chrY       402203  402332 (3265020) C  MAX_I-int      LTR/Pao             (4247) 3667   3533 121113
   19  25.3  0.0  0.0  chrY       402935  403012 (3264340) +  DOC2_DM        LINE/Jockey            220  368 (4425) 121114
  133  10.9  0.0  1.8  chrY       403088  403255 (3264097) +  FW2_DM         LINE/Jockey              1  165 (3796) 121115
  871  16.8 20.5  0.1  chrY       403258  404430 (3262922) +  FW2_DM         LINE/Jockey            363 1775 (2186) 121115
  499   3.0  0.0  0.2  chrY       404453  404855 (3262497) C  STALKER4_LTR   LTR/Gypsy              (0)  402      1 121116
 1977   1.1  0.2  0.0  chrY       404856  406710 (3260642) C  STALKER4_I-int LTR/Gypsy              (0) 6530   4673 121116
 3376   0.7  1.9  0.6  chrY       406709  409560 (3257792) C  STALKER4_I-int LTR/Gypsy           (2911) 3619    732 121116
  105  25.6 18.2  8.2  chrY       409563  409886 (3257466) C  STALKER4_I-int LTR/Gypsy           (7042)  354      1 121116
   27   0.0  0.0  0.0  chrY       409887  409919 (3257433) C  STALKER4_I-int LTR/Gypsy           (6497)   33      1 121116
  494   3.5  0.0  0.2  chrY       409920  410322 (3257030) C  STALKER4_LTR   LTR/Gypsy              (0)  402      1 121116
   33   8.8  0.0  0.0  chrY       410323  410379 (3256973) +  FW2_DM         LINE/Jockey           1775 1831 (2130) 121117
  542  16.3 18.7  2.2  chrY       410372  411023 (3256329) +  FW2_DM         LINE/Jockey           2966 3722  (239) 121117
  278  12.0  8.6  6.4  chrY       411268  411614 (3255738) +  Gypsy6A_LTR    LTR/Gypsy                1  396    (2) 121118
   14  18.0  0.0  3.0  chrY       411638  411671 (3255681) +  (ACC)n         Simple_repeat            1   33    (0) 121119
    2  26.8 29.2  7.3  chrY       411704  411816 (3255536) +  Gypsy6_I-int   LTR/Gypsy              405  540 (5595) 121120
  291  27.3 10.8  0.5  chrY       412041  412412 (3254940) +  Gypsy6_I-int   LTR/Gypsy              910 1319 (5693) 121120
  941  16.5  4.2  2.9  chrY       412427  413473 (3253879) +  Gypsy6_I-int   LTR/Gypsy             1432 2491 (4521) 121120
  570   9.7  2.9  0.4  chrY       413471  414018 (3253334) +  Gypsy6_I-int   LTR/Gypsy             4604 5165 (1847) 121120
  385  19.2  6.8  1.5  chrY       414066  414504 (3252848) +  Copia_I-int    LTR/Copia              154  615 (3978) 121121
  217   1.7  0.0  0.0  chrY       414516  414747 (3252605) C  STALKER4_I-int LTR/Gypsy           (1626) 4904   4673 121122
 3550   2.9  2.2  1.8  chrY       414746  418034 (3249318) C  STALKER4_I-int LTR/Gypsy           (2911) 3619    163 121122
   26   0.0  0.0  0.0  chrY       418214  418253 (3249099) C  STALKER4_I-int LTR/Gypsy           (6490)   40      1 121122
  494   3.5  0.0  0.2  chrY       418254  418656 (3248696) C  STALKER4_LTR   LTR/Gypsy              (0)  402      1 121122
   33   8.8  0.0  0.0  chrY       418657  418713 (3248639) +  FW2_DM         LINE/Jockey           1775 1831 (2130) 121123
  542  16.3 18.7  2.2  chrY       418706  419357 (3247995) +  FW2_DM         LINE/Jockey           2966 3722  (239) 121123
  278  12.0  8.6  6.4  chrY       419602  419948 (3247404) +  Gypsy6A_LTR    LTR/Gypsy                1  396    (2) 121124
   14  18.0  0.0  3.0  chrY       419972  420005 (3247347) +  (ACC)n         Simple_repeat            1   33    (0) 121125
  289  27.6 10.8  0.5  chrY       420378  420749 (3246603) +  Gypsy6_I-int   LTR/Gypsy              910 1319 (5693) 121126
  960  16.7  3.3  2.9  chrY       420764  421819 (3245533) +  Gypsy6_I-int   LTR/Gypsy             1432 2491 (4521) 121126
  570   9.7  2.9  0.4  chrY       421817  422364 (3244988) +  Gypsy6_I-int   LTR/Gypsy             4604 5165 (1847) 121126
 1532  24.8  6.0  7.1  chrY       422412  424538 (3242814) +  Copia_I-int    LTR/Copia              154 2258 (2335) 121127
   86  30.3  8.2  1.4  chrY       424775  424968 (3242384) +  Copia_I-int    LTR/Copia             2720 2926 (1667) 121127
   14  34.8  1.4  1.4  chrY       424971  425040 (3242312) +  Copia_I-int    LTR/Copia             3297 3366 (1227) 121127
   33  38.6  1.3 13.7  chrY       425012  425314 (3242038) C  ACCORD2_I-int  LTR/Gypsy           (6419)  793    524 121128
  189  23.7 11.5  0.0  chrY       425395  425698 (3241654) +  Copia_I-int    LTR/Copia             3357 3695  (898) 121127
   26   0.0  0.0  0.0  chrY       425699  425723 (3241629) +  (T)n           Simple_repeat            1   25    (0) 121129
 2129  10.4  0.7  1.0  chrY       425724  429139 (3238213) C  DMRT1B         LINE/R1               (12) 5171   1693 121130
  103  19.4  5.2  0.0  chrY       429121  429254 (3238098) +  Copia_I-int    LTR/Copia             3684 3824  (769) 121127
  150  30.4  4.9 22.8  chrY       429255  429722 (3237630) +  Copia_I-int    LTR/Copia             4194 4593    (0) 121127
   24  30.0  8.3  0.0  chrY       430057  430116 (3237236) +  Copia_I-int    LTR/Copia             1173 1237 (3356) 121131
 1858  16.8  5.5  2.3  chrY       430119  433192 (3234160) +  DIVER2_I-int   LTR/Pao                688 5269 (2645) 121132
  536   5.4  0.1  0.3  chrY       433191  433693 (3233659) +  DIVER2_I-int   LTR/Pao               2932 3411  (736) 121132
  221  11.8  3.1  0.0  chrY       433667  433920 (3233432) +  DIVER2_I-int   LTR/Pao               3573 3834  (313) 121132
  354   5.1  9.7  1.9  chrY       433927  434266 (3233086) +  DIVER2_LTR     LTR/Pao                 20  385    (0) 121133
  722   5.2  2.7  0.0  chrY       434385  435023 (3232329) +  DMCR1A         LINE/CR1              2873 3528  (942) 121134
  264   4.7  1.5  1.5  chrY       435012  435270 (3232082) C  DMCR1A         LINE/CR1            (2588) 1882   1624 121135
  208  21.9  0.4  2.0  chrY       435272  435522 (3231830) +  DMLTR5         LTR/Gypsy                1  247   (19) 121136
   82   1.2  0.0  0.0  chrY       435524  435604 (3231748) C  MICROPIA_LTR   LTR/Gypsy            (365)  111     31 121137
 3032  17.8  0.6  3.6  chrY       435601  439696 (3227656) C  MICROPIA_I-int LTR/Gypsy            (383) 4603      1 121138
  593   1.3  0.0  6.9  chrY       439697  440205 (3227147) C  MICROPIA_LTR   LTR/Gypsy              (0)  476      1 121138
  607   0.8  0.2  7.0  chrY       440213  440744 (3226608) +  QUASIMODO2-LTR_DM LTR/Gypsy                1  498    (0) 121139
  376   0.7  0.3  0.3  chrY       440745  441042 (3226310) +  QUASIMODO2-I_DM LTR/Gypsy                1  298 (5202) 121139
   25  13.0  8.2  1.5  chrY       441045  441105 (3226247) +  (TA)n          Simple_repeat            1   65    (0) 121140
  722   5.2  2.7  0.0  chrY       441123  441761 (3225591) +  DMCR1A         LINE/CR1              2873 3528  (942) 121141
  201   4.9 15.9  1.5  chrY       441750  441976 (3225376) C  DMCR1A         LINE/CR1            (2588) 1882   1624 121142
  207  22.4  0.4  2.0  chrY       441978  442228 (3225124) +  DMLTR5         LTR/Gypsy                1  247   (19) 121143
   82   1.2  0.0  0.0  chrY       442230  442310 (3225042) C  MICROPIA_LTR   LTR/Gypsy            (365)  111     31 121144
 3032  17.8  0.6  3.6  chrY       442307  446402 (3220950) C  MICROPIA_I-int LTR/Gypsy            (341) 4135      1 121145
  593   1.3  0.0  6.9  chrY       446403  446911 (3220441) C  MICROPIA_LTR   LTR/Gypsy              (0)  476      1 121145
  610   0.6  0.2  7.0  chrY       446919  447450 (3219902) +  QUASIMODO2-LTR_DM LTR/Gypsy                1  498    (0) 121146
 6290   2.0  0.2  0.7  chrY       447451  453427 (3213925) +  QUASIMODO2-I_DM LTR/Gypsy                1 5500    (0) 121146
    8  29.6  0.0  2.3  chrY       453546  453590 (3213762) +  Copia_I-int    LTR/Copia             4469 4512   (81) 121147
   13  17.2  4.9  2.4  chrY       453941  453981 (3213371) +  (TTATA)n       Simple_repeat            1   42    (0) 121148
  227   4.4 30.4  0.0  chrY       453983  454302 (3213050) +  DMCR1A         LINE/CR1              1585 2001 (2469) 121149
  758   5.3 16.4  0.0  chrY       454303  455016 (3212336) +  DMCR1A         LINE/CR1              2698 3528  (942) 121149
  267   4.3  1.6  1.2  chrY       455005  455262 (3212090) C  DMCR1A         LINE/CR1            (2588) 1882   1624 121150
  287  10.8  6.9  0.7  chrY       455270  455559 (3211793) +  Gypsy2-LTR_DM  LTR/Gypsy                1  308   (30) 121151
  452   4.3 18.4  0.0  chrY       455560  456093 (3211259) +  Gypsy2-I_DM    LTR/Gypsy              593 1224 (5321) 121151
  313   2.8  4.6  0.0  chrY       456100  456382 (3210970) +  Gypsy2-I_DM    LTR/Gypsy             1342 1637 (4908) 121151
 1924   5.1  6.9  0.1  chrY       456386  457992 (3209360) +  Gypsy2-I_DM    LTR/Gypsy             2026 3742 (2803) 121151
  242   6.2 10.4  0.0  chrY       457992  458232 (3209120) +  Gypsy2-I_DM    LTR/Gypsy             4000 4265 (2280) 121151
    9   8.8  0.0  0.0  chrY       458229  458262 (3209090) +  Gypsy2-I_DM    LTR/Gypsy             4575 4608 (1937) 121151
  248   7.3  6.8  0.0  chrY       458273  458520 (3208832) C  DMCR1A         LINE/CR1            (2889) 1581   1317 121150
   40  10.2  0.0  1.4  chrY       458514  458583 (3208769) C  DMCR1A         LINE/CR1            (3384) 1086   1018 121150
   23   4.3  2.1  0.0  chrY       458582  458628 (3208724) C  G3_DM          LINE/Jockey         (4557)   48      1 121152
   14   7.0  0.0 11.8  chrY       458837  458874 (3208478) +  A-rich         Low_complexity           1   34    (0) 121153
  381  33.4 14.3  0.1  chrY       458936  459554 (3207798) C  DIVER2_I-int   LTR/Pao              (247) 3900   3153 121154
   46  42.8  2.9  0.7  chrY       459570  459708 (3207644) C  DIVER2_I-int   LTR/Pao             (1142) 3005   2864 121154
 1620   5.0  7.8  0.2  chrY       459700  461062 (3206290) +  Gypsy2-I_DM    LTR/Gypsy             2306 3772 (2773) 121155
  112   5.8 31.4  0.0  chrY       461063  461218 (3206134) C  DMCR1A         LINE/CR1            (3188) 1282   1078 121156
   59  45.0  1.3  0.9  chrY       461209  461524 (3205828) C  DIVER2_I-int   LTR/Pao             (1173) 2974   2658 121154
    5  41.3  1.4  0.0  chrY       461931  462068 (3205284) C  DIVER2_I-int   LTR/Pao             (2588) 3055   2916 121157
  116  39.8 16.3  2.2  chrY       462213  462610 (3204742) C  DIVER2_I-int   LTR/Pao             (1788) 2359   1907 121157
  396   5.0  4.0  0.2  chrY       463249  463652 (3203700) C  DIVER2_I-int   LTR/Pao             (3041) 1106    688 121157
   67  30.9 10.2  5.6  chrY       463655  463791 (3203561) C  Copia_I-int    LTR/Copia           (3356) 1237   1095 121158
 1603  24.3  4.6  7.1  chrY       464264  466419 (3200933) C  Copia_I-int    LTR/Copia           (2335) 2258    154 121159
  568   9.9  2.9  0.4  chrY       466467  467014 (3200338) C  Gypsy6_I-int   LTR/Gypsy           (1847) 5165   4604 121160
  536  16.5  0.8  3.3  chrY       467012  467601 (3199751) C  Gypsy6_I-int   LTR/Gypsy           (4521) 2491   1916 121160
  680   3.5 23.8  0.0  chrY       467781  468427 (3198925) C  FB4_DM         DNA/TcMar-Tc1       (3288)  801      1 121161
   88   3.2  0.0  0.0  chrY       469272  469364 (3197988) C  G3_DM          LINE/Jockey         (4512)   93      1 121162
    7  13.2  2.0 10.6  chrY       469398  469448 (3197904) C  G3_DM          LINE/Jockey         (4552)   53      7 121163
   13  12.7  2.6  5.4  chrY       469450  469487 (3197865) +  A-rich         Low_complexity           1   37    (0) 121164
   39  14.6 20.7  0.0  chrY       469672  469753 (3197599) +  DMRT1A         LINE/R1                  4  102 (5081) 121165
   77   7.5  9.4  0.0  chrY       469751  469856 (3197496) +  DMRT1A         LINE/R1                261  376 (4807) 121165
  351   6.8  6.4  0.9  chrY       469855  470182 (3197170) +  DMRT1A         LINE/R1                483  828 (4355) 121165
 1554   7.8 26.0  0.1  chrY       470180  471777 (3195575) +  DMRT1A         LINE/R1               1078 3088 (2095) 121165
  377  24.7  8.0  1.1  chrY       471756  472270 (3195082) C  MICROPIA_I-int LTR/Gypsy           (1561) 2915   2366 121166
  178  18.6  0.0  0.0  chrY       472268  472493 (3194859) C  MICROPIA_I-int LTR/Gypsy           (2832) 1644   1419 121166
   12   9.7 29.0  9.9  chrY       472493  472561 (3194791) C  MICROPIA_I-int LTR/Gypsy           (4395)   81      1 121166
   37  37.4  1.6  9.0  chrY       472588  472837 (3194515) C  ACCORD2_I-int  LTR/Gypsy           (6456)  756    524 121167
  287   8.2  2.8  2.0  chrY       472842  473146 (3194206) C  STALKER4_LTR   LTR/Gypsy            (121)  281      1 121168
   67  13.0  2.6  9.8  chrY       473147  473299 (3194053) C  STALKER4_I-int LTR/Gypsy              (0) 6530   6388 121168
   31  12.1  1.5 13.3  chrY       473330  473396 (3193956) +  ROVER-LTR_DM   LTR/Gypsy              308  367    (0) 121169
   85   6.7 31.9  6.7  chrY       473397  473540 (3193812) +  ROVER-I_DM     LTR/Gypsy                1  178 (6406) 121169
  549   4.8  4.1  0.0  chrY       473671  474154 (3193198) +  DMCR1A         LINE/CR1              2561 3064 (1406) 121170
  105   4.8  4.6  3.0  chrY       474157  474286 (3193066) +  DMCR1A         LINE/CR1              3434 3565  (905) 121170
  638   6.5 16.6  0.7  chrY       474286  474949 (3192403) +  DMCR1A         LINE/CR1              3702 4470    (0) 121170
  661  15.9  7.0  1.9  chrY       474943  475710 (3191642) +  MICROPIA_I-int LTR/Gypsy             3142 3948  (528) 121171
  104  12.0  6.8  0.0  chrY       475721  475837 (3191515) +  MICROPIA_I-int LTR/Gypsy             4126 4250  (226) 121171
  318  17.3 14.7  4.3  chrY       475840  476261 (3191091) +  Gypsy_LTR      LTR/Gypsy                1  464   (18) 121172
  139  11.3 32.4  1.3  chrY       476281  476459 (3190893) +  MICROPIA_I-int LTR/Gypsy             4243 4476    (0) 121171
  277  14.2  8.6  8.6  chrY       476463  476846 (3190506) +  MICROPIA_LTR   LTR/Gypsy               93  476    (0) 121173
   63  24.3 20.9  2.4  chrY       476847  476928 (3190424) C  DNAREP1_DM     RC/Helitron          (478)  116     10 121174
   12  21.6  2.5  2.5  chrY       477485  477524 (3189828) +  A-rich         Low_complexity           1   40    (0) 121175
  401   7.1  0.3  3.0  chrY       478056  478432 (3188920) +  ROVER-LTR_DM   LTR/Gypsy                1  367    (0) 121176
  802   8.9  2.0  8.5  chrY       478432  479782 (3187570) +  ROVER-I_DM     LTR/Gypsy                1 1396 (5188) 121176
 2679  12.1  0.9  0.0  chrY       479777  482273 (3185079) +  ROVER-I_DM     LTR/Gypsy             1776 4295 (2289) 121176
 1510  12.8  0.7  0.9  chrY       482275  485215 (3182137) +  ROVER-I_DM     LTR/Gypsy             3532 6584    (0) 121177
  431  23.1 18.6  1.4  chrY       485353  485488 (3181864) C  QUASIMODO_I-int LTR/Gypsy            (223) 5837   5661 121178
   30   4.8  2.2  2.2  chrY       485489  485533 (3181819) +  (TTA)n         Simple_repeat            1   45    (0) 121179
  431  23.1 18.6  1.4  chrY       485534  486301 (3181051) C  QUASIMODO_I-int LTR/Gypsy            (400) 5660   4781 121178
   95  21.6  5.9  0.5  chrY       486311  486496 (3180856) C  QUASIMODO_I-int LTR/Gypsy           (1447) 4613   4418 121178
    6  33.1 22.4  0.6  chrY       486491  486633 (3180719) C  QUASIMODO_I-int LTR/Gypsy           (1826) 4234   4061 121178
   40  38.1  0.0  0.0  chrY       486609  486742 (3180610) +  FROGGER_I-int  LTR/Copia              662  795 (1282) 121180
  178  38.9 19.0  1.4  chrY       486794  487481 (3179871) +  Copia1-I_DM    LTR/Copia             3239 4046   (78) 121181
  184  16.1 24.1  0.0  chrY       487537  487785 (3179567) C  DNAREP1_DM     RC/Helitron          (284)  310      2 121182
   14  18.6  8.2  0.0  chrY       487882  487930 (3179422) +  (TATAA)n       Simple_repeat            1   53    (0) 121183
   12  26.8  0.0  5.8  chrY       488005  488059 (3179293) +  A-rich         Low_complexity           1   52    (0) 121184
  403  13.4  9.2 10.3  chrY       492159  492758 (3174594) +  IDEFIX_LTR     LTR/Gypsy                1  594    (0) 121185
 1507  14.8 11.1  1.2  chrY       492969  494609 (3172743) C  IDEFIX_I-int   LTR/Gypsy           (3461) 2167    365 121186
  363   5.7  1.8  0.0  chrY       494610  494996 (3172356) C  TRANSIB1       DNA/CMC-Transib        (0) 3014   2621 121187
   90   4.8  1.9  0.0  chrY       495001  495103 (3172249) C  TRANSIB1       DNA/CMC-Transib      (504) 2510   2406 121187
  225  21.8  4.3  1.6  chrY       495086  495388 (3171964) C  IDEFIX_I-int   LTR/Gypsy           (5316)  312      2 121186
  206   9.6  0.4 10.3  chrY       495783  496037 (3171315) C  IDEFIX_LTR     LTR/Gypsy             (72)  522    291 121188
  841   5.9 15.4  0.0  chrY       496013  496839 (3170513) +  TRANSIB2       DNA/CMC-Transib        514 1467 (1377) 121189
  406   0.9  2.7  0.0  chrY       496853  497185 (3170167) C  DM1731_I-int   LTR/Copia            (760) 3216   2875 121190
  127  32.9 11.5  1.2  chrY       497647  498067 (3169285) C  BURDOCK_I-int  LTR/Gypsy           (4378) 1337    631 121191
   15   7.5  0.0  6.7  chrY       498420  498451 (3168901) +  (TTTC)n        Simple_repeat            1   30    (0) 121192
   50  14.7 47.4  0.0  chrY       498763  498857 (3168495) C  DNAREP1_DM     RC/Helitron          (454)  140      1 121193
  265   8.5 17.8  0.1  chrY       499374  499971 (3167381) C  IDEFIX_LTR     LTR/Gypsy              (0)  594     99 121194
  269   5.2 19.8  0.9  chrY       499964  500407 (3166945) +  DMCR1A         LINE/CR1               891 1418 (3052) 121195