diff test-data/354_fraction_counts.tab @ 0:f6f0f1e5e940 draft

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/repenrich commit 61e203df0be5ed877ff92b917c7cde6eeeab8310
author artbio
date Wed, 02 Aug 2017 05:17:29 -0400
parents
children 15e3e29f310e
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/354_fraction_counts.tab	Wed Aug 02 05:17:29 2017 -0400
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+LSU-rRNA_Dme	rRNA	rRNA	3659329
+FW3_DM	LINE	Jockey	831
+DMTOM1_LTR	LTR	Gypsy	1004
+R1_DM	LINE	R1	7343
+TAHRE	LINE	Jockey	4560
+G4_DM	LINE	Jockey	3668
+BS	LINE	Jockey	7296
+Stalker2_I-int	LTR	Gypsy	12252
+Stalker3_LTR	LTR	Gypsy	593
+TABOR_I-int	LTR	Gypsy	3947
+G7_DM	LINE	Jockey	162
+BEL_I-int	LTR	Pao	23757
+Gypsy6_I-int	LTR	Gypsy	7489
+ACCORD_I-int	LTR	Gypsy	2723
+DM412B_LTR	LTR	Gypsy	3078
+G2_DM	LINE	Jockey	1328
+SSU-rRNA_Hsa	rRNA	rRNA	318045
+TART_B1	LINE	Jockey	25248
+S2_DM	DNA	TcMar-Tc1	765
+LOOPER1_DM	DNA	PiggyBac	821
+HOBO	DNA	hAT-hobo	5031
+ARS406_DM	Unknown	Unknown	563
+G6_DM	LINE	Jockey	4827
+DOC2_DM	LINE	Jockey	4438
+Baggins1	LINE	LOA	5136
+NINJA_LTR	LTR	Pao	491
+TRANSIB2	DNA	CMC-Transib	3197
+Gypsy5_LTR	LTR	Gypsy	651
+MDG3_LTR	LTR	Gypsy	1037
+Gypsy12A_LTR	LTR	Gypsy	3059
+Gypsy_LTR	LTR	Gypsy	1306
+TIRANT_LTR	LTR	Gypsy	1371
+I_DM	LINE	I	7987
+DIVER2_I-int	LTR	Pao	6679
+P-1_DY	DNA	P	8
+Invader2_I-int	LTR	Gypsy	6823
+DOC6_DM	LINE	Jockey	1259
+BURDOCK_LTR	LTR	Gypsy	287
+SSU-rRNA_Dme	rRNA	rRNA	7113
+MAX_LTR	LTR	Pao	1017
+STALKER4_LTR	LTR	Gypsy	1292
+XDMR_DM	Unknown	Unknown	3317
+BARI_DM	DNA	TcMar-Tc1	990
+Transib-N1_DM	DNA	CMC-Transib	308
+Gypsy5_I-int	LTR	Gypsy	2448
+XDMR	Unknown	Unknown	1249
+ACCORD2_LTR	LTR	Gypsy	235
+POGON1	DNA	TcMar-Pogo	331
+BS4_DM	LINE	Jockey	34
+ALA_DM	Unknown	Unknown	5
+Gypsy1-I_DM	LTR	Gypsy	8160
+ACCORD_LTR	LTR	Gypsy	295
+BURDOCK_I-int	LTR	Gypsy	3119
+ZAM_I-int	LTR	Gypsy	5129
+Invader5_I-int	LTR	Gypsy	416
+G3_DM	LINE	Jockey	797
+ROOA_I-int	LTR	Pao	4985
+Gypsy1-LTR_DM	LTR	Gypsy	1042
+DM1731_I-int	LTR	Copia	5180
+ROO_I-int	LTR	Pao	31793
+DM412	LTR	Gypsy	24086
+PROTOP	DNA	P	4942
+TART-A	LINE	Jockey	3697
+ROO_LTR	LTR	Pao	1639
+DIVER_LTR	LTR	Pao	469
+Gypsy3_I-int	LTR	Gypsy	3399
+BATUMI_LTR	LTR	Pao	554
+IDEFIX_LTR	LTR	Gypsy	2191
+G5_DM	LINE	Jockey	2601
+HETA	LINE	Jockey	23025
+Gypsy11_I-int	LTR	Gypsy	671
+R1-2_DM	LINE	R1	267
+Gypsy11_LTR	LTR	Gypsy	134
+HELENA_RT	LINE	Jockey	653
+FTZ_DM	Unknown	Unknown	0
+MICROPIA_I-int	LTR	Gypsy	10149
+Invader4_I-int	LTR	Gypsy	1439
+PLACW_DM	DNA	P	149
+BLOOD_LTR	LTR	Gypsy	748
+R2_DM	LINE	R2	15327
+Copia1-I_DM	LTR	Copia	3588
+Gypsy4_I-int	LTR	Gypsy	12113
+Chouto_LTR	LTR	Gypsy	299
+BATUMI_I-int	LTR	Pao	6395
+DNAREP1_DM	RC	Helitron	67821
+DMRT1B	LINE	R1	9706
+DMRT1C	LINE	R1	2530
+TLD2	LTR	Gypsy	65
+DMRT1A	LINE	R1	4456
+DM1731_LTR	LTR	Copia	577
+LSU-rRNA_Cel	rRNA	rRNA	520168
+Copia_LTR	LTR	Copia	1408
+Gypsy6_LTR	LTR	Gypsy	428
+Gypsy12_I-int	LTR	Gypsy	9778
+BLASTOPIA_LTR	LTR	Gypsy	550
+Bica_LTR	LTR	Gypsy	140
+Gypsy8_LTR	LTR	Gypsy	1311
+NINJA_I-int	LTR	Pao	5274
+PROTOP_B	DNA	P	8690
+PROTOP_A	DNA	P	3533
+Invader3_LTR	LTR	Gypsy	657
+Chimpo_LTR	LTR	Gypsy	94
+Invader2_LTR	LTR	Gypsy	492
+BLASTOPIA_I-int	LTR	Gypsy	10309
+FROGGER_LTR	LTR	Copia	41
+NOMAD_I-int	LTR	Gypsy	16469
+QUASIMODO_LTR	LTR	Gypsy	1332
+TABOR_LTR	LTR	Gypsy	384
+Stalker2_LTR	LTR	Gypsy	726
+MICROPIA_LTR	LTR	Gypsy	797
+Gypsy9_I-int	LTR	Gypsy	504
+STALKER4_I-int	LTR	Gypsy	6207
+TRANSIB1	DNA	CMC-Transib	2082
+DOC	LINE	Jockey	17883
+TRANSIB3	DNA	CMC-Transib	1184
+Copia_I-int	LTR	Copia	27612
+TRANSIB4	DNA	CMC-Transib	635
+Gypsy10_LTR	LTR	Gypsy	314
+Invader3_I-int	LTR	Gypsy	4667
+Invader1_I-int	LTR	Gypsy	1832
+BS3_DM	LINE	Jockey	1252
+Gypsy2-LTR_DM	LTR	Gypsy	966
+LSU-rRNA_Hsa	rRNA	rRNA	5
+NOMAD_LTR	LTR	Gypsy	619
+Helitron1_DM	RC	Helitron	3
+LINEJ1_DM	LINE	Jockey	7025
+Invader4_LTR	LTR	Gypsy	1420
+MDG3_I-int	LTR	Gypsy	5392
+LmeSINE1c	SINE	tRNA-Deu-L2	599
+ROVER-LTR_DM	LTR	Gypsy	564
+S_DM	DNA	TcMar-Tc1	3612
+Invader6_I-int	LTR	Gypsy	6931
+ROVER-I_DM	LTR	Gypsy	6513
+QUASIMODO_I-int	LTR	Gypsy	14906
+Chouto_I-int	LTR	Gypsy	1690
+NTS_DM	Other	Other	65954
+Gypsy3_LTR	LTR	Gypsy	566
+SSU-rRNA_Cel	rRNA	rRNA	3463
+MINOS	DNA	TcMar-Tc1	173
+DOC4_DM	LINE	Jockey	813
+ZAM_LTR	LTR	Gypsy	259
+QUASIMODO2-LTR_DM	LTR	Gypsy	313
+Gypsy2-I_DM	LTR	Gypsy	4606
+TRANSPAC_I-int	LTR	Gypsy	9674
+Bica_I-int	LTR	Gypsy	1852
+BS2	LINE	Jockey	5595
+BLOOD_I-int	LTR	Gypsy	22330
+DMCR1A	LINE	CR1	20380
+QUASIMODO2-I_DM	LTR	Gypsy	2717
+HMSBEAGLE_I-int	LTR	Gypsy	7239
+DMLTR5	LTR	Gypsy	161
+Gypsy7_LTR	LTR	Gypsy	112
+G5A_DM	LINE	Jockey	1804
+MDG1_I-int	LTR	Gypsy	16315
+Gypsy2_I-int	LTR	Gypsy	3190
+BARI1	DNA	TcMar-Tc1	395
+Invader5_LTR	LTR	Gypsy	69
+DM176_LTR	LTR	Gypsy	899
+DOC3_DM	LINE	Jockey	11941
+Copia1-LTR_DM	LTR	Copia	771
+TOM_I-int	LTR	Gypsy	2563
+NOF_FB	DNA	MULE-NOF	1272
+Chimpo_I-int	LTR	Gypsy	1288
+DIVER_I-int	LTR	Pao	13178
+TIRANT_I-int	LTR	Gypsy	10917
+Gypsy2_LTR	LTR	Gypsy	479
+FB4_DM	DNA	TcMar-Tc1	7149
+GTWIN_LTR	LTR	Gypsy	598
+Invader6_LTR	LTR	Gypsy	649
+Gypsy8_I-int	LTR	Gypsy	4809
+G_DM	LINE	Jockey	8905
+TRANSPAC_LTR	LTR	Gypsy	538
+FUSHI_DM	Unknown	Unknown	0
+Transib5	DNA	CMC-Transib	1123
+MuDR-1_DEl	DNA	MULE-NOF	6
+Mariner2_DM	DNA	TcMar-Tc1	2011
+DOC5_DM	LINE	Jockey	3037
+TC1_DM	DNA	TcMar-Tc1	1840
+Gypsy9_LTR	LTR	Gypsy	51
+DMRP1	Unknown	Unknown	262
+Gypsy10_I-int	LTR	Gypsy	2258
+Gypsy4_LTR	LTR	Gypsy	274
+DM297_LTR	LTR	Gypsy	1489
+ACCORD2_I-int	LTR	Gypsy	2934
+Invader1_LTR	LTR	Gypsy	3346
+BEL_LTR	LTR	Pao	875
+IVK_DM	LINE	I	3349
+M4DM	DNA	CMC-Transib	1727
+FW2_DM	LINE	Jockey	14234
+Copia2_I-int	LTR	Copia	4218
+MDG1_LTR	LTR	Gypsy	690
+Gypsy12_LTR	LTR	Gypsy	6292
+Gypsy7_I-int	LTR	Gypsy	1256
+FROGGER_I-int	LTR	Copia	1611
+Gypsy_I-int	LTR	Gypsy	6822
+5S_DM	RNA	RNA	6317
+GTWIN_I-int	LTR	Gypsy	5448
+CIRCE	LTR	Gypsy	3767
+DIVER2_LTR	LTR	Pao	793
+POGO	DNA	TcMar-Pogo	2427
+Gypsy6A_LTR	LTR	Gypsy	617
+MAX_I-int	LTR	Pao	12395
+ROOA_LTR	LTR	Pao	400
+DM176_I-int	LTR	Gypsy	3627
+Copia2_LTR_DM	LTR	Copia	891
+DM297_I-int	LTR	Gypsy	11837
+IDEFIX_I-int	LTR	Gypsy	6193
+Jockey2	LINE	Jockey	1770
+TC1-2_DM	DNA	TcMar-Tc1	3807
+DMRPR	Unknown	Unknown	128