view test-data/354_fraction_counts.tab @ 1:51b4590a972d draft

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/repenrich commit 98f4b00d71cbc2dd15fc633a6cc3246235308e46
author artbio
date Mon, 18 Sep 2017 17:22:07 -0400
parents f6f0f1e5e940
children 15e3e29f310e
line wrap: on
line source

LSU-rRNA_Dme	rRNA	rRNA	3659329
FW3_DM	LINE	Jockey	831
DMTOM1_LTR	LTR	Gypsy	1004
R1_DM	LINE	R1	7343
TAHRE	LINE	Jockey	4560
G4_DM	LINE	Jockey	3668
BS	LINE	Jockey	7296
Stalker2_I-int	LTR	Gypsy	12252
Stalker3_LTR	LTR	Gypsy	593
TABOR_I-int	LTR	Gypsy	3947
G7_DM	LINE	Jockey	162
BEL_I-int	LTR	Pao	23757
Gypsy6_I-int	LTR	Gypsy	7489
ACCORD_I-int	LTR	Gypsy	2723
DM412B_LTR	LTR	Gypsy	3078
G2_DM	LINE	Jockey	1328
SSU-rRNA_Hsa	rRNA	rRNA	318045
TART_B1	LINE	Jockey	25248
S2_DM	DNA	TcMar-Tc1	765
LOOPER1_DM	DNA	PiggyBac	821
HOBO	DNA	hAT-hobo	5031
ARS406_DM	Unknown	Unknown	563
G6_DM	LINE	Jockey	4827
DOC2_DM	LINE	Jockey	4438
Baggins1	LINE	LOA	5136
NINJA_LTR	LTR	Pao	491
TRANSIB2	DNA	CMC-Transib	3197
Gypsy5_LTR	LTR	Gypsy	651
MDG3_LTR	LTR	Gypsy	1037
Gypsy12A_LTR	LTR	Gypsy	3059
Gypsy_LTR	LTR	Gypsy	1306
TIRANT_LTR	LTR	Gypsy	1371
I_DM	LINE	I	7987
DIVER2_I-int	LTR	Pao	6679
P-1_DY	DNA	P	8
Invader2_I-int	LTR	Gypsy	6823
DOC6_DM	LINE	Jockey	1259
BURDOCK_LTR	LTR	Gypsy	287
SSU-rRNA_Dme	rRNA	rRNA	7113
MAX_LTR	LTR	Pao	1017
STALKER4_LTR	LTR	Gypsy	1292
XDMR_DM	Unknown	Unknown	3317
BARI_DM	DNA	TcMar-Tc1	990
Transib-N1_DM	DNA	CMC-Transib	308
Gypsy5_I-int	LTR	Gypsy	2448
XDMR	Unknown	Unknown	1249
ACCORD2_LTR	LTR	Gypsy	235
POGON1	DNA	TcMar-Pogo	331
BS4_DM	LINE	Jockey	34
ALA_DM	Unknown	Unknown	5
Gypsy1-I_DM	LTR	Gypsy	8160
ACCORD_LTR	LTR	Gypsy	295
BURDOCK_I-int	LTR	Gypsy	3119
ZAM_I-int	LTR	Gypsy	5129
Invader5_I-int	LTR	Gypsy	416
G3_DM	LINE	Jockey	797
ROOA_I-int	LTR	Pao	4985
Gypsy1-LTR_DM	LTR	Gypsy	1042
DM1731_I-int	LTR	Copia	5180
ROO_I-int	LTR	Pao	31793
DM412	LTR	Gypsy	24086
PROTOP	DNA	P	4942
TART-A	LINE	Jockey	3697
ROO_LTR	LTR	Pao	1639
DIVER_LTR	LTR	Pao	469
Gypsy3_I-int	LTR	Gypsy	3399
BATUMI_LTR	LTR	Pao	554
IDEFIX_LTR	LTR	Gypsy	2191
G5_DM	LINE	Jockey	2601
HETA	LINE	Jockey	23025
Gypsy11_I-int	LTR	Gypsy	671
R1-2_DM	LINE	R1	267
Gypsy11_LTR	LTR	Gypsy	134
HELENA_RT	LINE	Jockey	653
FTZ_DM	Unknown	Unknown	0
MICROPIA_I-int	LTR	Gypsy	10149
Invader4_I-int	LTR	Gypsy	1439
PLACW_DM	DNA	P	149
BLOOD_LTR	LTR	Gypsy	748
R2_DM	LINE	R2	15327
Copia1-I_DM	LTR	Copia	3588
Gypsy4_I-int	LTR	Gypsy	12113
Chouto_LTR	LTR	Gypsy	299
BATUMI_I-int	LTR	Pao	6395
DNAREP1_DM	RC	Helitron	67821
DMRT1B	LINE	R1	9706
DMRT1C	LINE	R1	2530
TLD2	LTR	Gypsy	65
DMRT1A	LINE	R1	4456
DM1731_LTR	LTR	Copia	577
LSU-rRNA_Cel	rRNA	rRNA	520168
Copia_LTR	LTR	Copia	1408
Gypsy6_LTR	LTR	Gypsy	428
Gypsy12_I-int	LTR	Gypsy	9778
BLASTOPIA_LTR	LTR	Gypsy	550
Bica_LTR	LTR	Gypsy	140
Gypsy8_LTR	LTR	Gypsy	1311
NINJA_I-int	LTR	Pao	5274
PROTOP_B	DNA	P	8690
PROTOP_A	DNA	P	3533
Invader3_LTR	LTR	Gypsy	657
Chimpo_LTR	LTR	Gypsy	94
Invader2_LTR	LTR	Gypsy	492
BLASTOPIA_I-int	LTR	Gypsy	10309
FROGGER_LTR	LTR	Copia	41
NOMAD_I-int	LTR	Gypsy	16469
QUASIMODO_LTR	LTR	Gypsy	1332
TABOR_LTR	LTR	Gypsy	384
Stalker2_LTR	LTR	Gypsy	726
MICROPIA_LTR	LTR	Gypsy	797
Gypsy9_I-int	LTR	Gypsy	504
STALKER4_I-int	LTR	Gypsy	6207
TRANSIB1	DNA	CMC-Transib	2082
DOC	LINE	Jockey	17883
TRANSIB3	DNA	CMC-Transib	1184
Copia_I-int	LTR	Copia	27612
TRANSIB4	DNA	CMC-Transib	635
Gypsy10_LTR	LTR	Gypsy	314
Invader3_I-int	LTR	Gypsy	4667
Invader1_I-int	LTR	Gypsy	1832
BS3_DM	LINE	Jockey	1252
Gypsy2-LTR_DM	LTR	Gypsy	966
LSU-rRNA_Hsa	rRNA	rRNA	5
NOMAD_LTR	LTR	Gypsy	619
Helitron1_DM	RC	Helitron	3
LINEJ1_DM	LINE	Jockey	7025
Invader4_LTR	LTR	Gypsy	1420
MDG3_I-int	LTR	Gypsy	5392
LmeSINE1c	SINE	tRNA-Deu-L2	599
ROVER-LTR_DM	LTR	Gypsy	564
S_DM	DNA	TcMar-Tc1	3612
Invader6_I-int	LTR	Gypsy	6931
ROVER-I_DM	LTR	Gypsy	6513
QUASIMODO_I-int	LTR	Gypsy	14906
Chouto_I-int	LTR	Gypsy	1690
NTS_DM	Other	Other	65954
Gypsy3_LTR	LTR	Gypsy	566
SSU-rRNA_Cel	rRNA	rRNA	3463
MINOS	DNA	TcMar-Tc1	173
DOC4_DM	LINE	Jockey	813
ZAM_LTR	LTR	Gypsy	259
QUASIMODO2-LTR_DM	LTR	Gypsy	313
Gypsy2-I_DM	LTR	Gypsy	4606
TRANSPAC_I-int	LTR	Gypsy	9674
Bica_I-int	LTR	Gypsy	1852
BS2	LINE	Jockey	5595
BLOOD_I-int	LTR	Gypsy	22330
DMCR1A	LINE	CR1	20380
QUASIMODO2-I_DM	LTR	Gypsy	2717
HMSBEAGLE_I-int	LTR	Gypsy	7239
DMLTR5	LTR	Gypsy	161
Gypsy7_LTR	LTR	Gypsy	112
G5A_DM	LINE	Jockey	1804
MDG1_I-int	LTR	Gypsy	16315
Gypsy2_I-int	LTR	Gypsy	3190
BARI1	DNA	TcMar-Tc1	395
Invader5_LTR	LTR	Gypsy	69
DM176_LTR	LTR	Gypsy	899
DOC3_DM	LINE	Jockey	11941
Copia1-LTR_DM	LTR	Copia	771
TOM_I-int	LTR	Gypsy	2563
NOF_FB	DNA	MULE-NOF	1272
Chimpo_I-int	LTR	Gypsy	1288
DIVER_I-int	LTR	Pao	13178
TIRANT_I-int	LTR	Gypsy	10917
Gypsy2_LTR	LTR	Gypsy	479
FB4_DM	DNA	TcMar-Tc1	7149
GTWIN_LTR	LTR	Gypsy	598
Invader6_LTR	LTR	Gypsy	649
Gypsy8_I-int	LTR	Gypsy	4809
G_DM	LINE	Jockey	8905
TRANSPAC_LTR	LTR	Gypsy	538
FUSHI_DM	Unknown	Unknown	0
Transib5	DNA	CMC-Transib	1123
MuDR-1_DEl	DNA	MULE-NOF	6
Mariner2_DM	DNA	TcMar-Tc1	2011
DOC5_DM	LINE	Jockey	3037
TC1_DM	DNA	TcMar-Tc1	1840
Gypsy9_LTR	LTR	Gypsy	51
DMRP1	Unknown	Unknown	262
Gypsy10_I-int	LTR	Gypsy	2258
Gypsy4_LTR	LTR	Gypsy	274
DM297_LTR	LTR	Gypsy	1489
ACCORD2_I-int	LTR	Gypsy	2934
Invader1_LTR	LTR	Gypsy	3346
BEL_LTR	LTR	Pao	875
IVK_DM	LINE	I	3349
M4DM	DNA	CMC-Transib	1727
FW2_DM	LINE	Jockey	14234
Copia2_I-int	LTR	Copia	4218
MDG1_LTR	LTR	Gypsy	690
Gypsy12_LTR	LTR	Gypsy	6292
Gypsy7_I-int	LTR	Gypsy	1256
FROGGER_I-int	LTR	Copia	1611
Gypsy_I-int	LTR	Gypsy	6822
5S_DM	RNA	RNA	6317
GTWIN_I-int	LTR	Gypsy	5448
CIRCE	LTR	Gypsy	3767
DIVER2_LTR	LTR	Pao	793
POGO	DNA	TcMar-Pogo	2427
Gypsy6A_LTR	LTR	Gypsy	617
MAX_I-int	LTR	Pao	12395
ROOA_LTR	LTR	Pao	400
DM176_I-int	LTR	Gypsy	3627
Copia2_LTR_DM	LTR	Copia	891
DM297_I-int	LTR	Gypsy	11837
IDEFIX_I-int	LTR	Gypsy	6193
Jockey2	LINE	Jockey	1770
TC1-2_DM	DNA	TcMar-Tc1	3807
DMRPR	Unknown	Unknown	128