Mercurial > repos > artbio > repenrich2
diff test-data/353_fraction_counts.tab @ 0:4905a332a094 draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/repenrich2 commit 73721d980c1f422dc880d80f61e44d270992e537
| author | artbio |
|---|---|
| date | Sat, 20 Apr 2024 11:56:53 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/353_fraction_counts.tab Sat Apr 20 11:56:53 2024 +0000 @@ -0,0 +1,210 @@ +5S_DM RNA RNA 10392 +ACCORD_I-int LTR Gypsy 2165 +ACCORD_LTR LTR Gypsy 220 +ACCORD2_I-int LTR Gypsy 2458 +ACCORD2_LTR LTR Gypsy 192 +ALA_DM Unknown Unknown 6 +ARS406_DM Unknown Unknown 719 +Baggins1 LINE LOA 3893 +BARI_DM DNA TcMar-Tc1 902 +BARI1 DNA TcMar-Tc1 322 +BATUMI_I-int LTR Pao 4789 +BATUMI_LTR LTR Pao 403 +BEL_I-int LTR Pao 21860 +BEL_LTR LTR Pao 858 +Bica_I-int LTR Gypsy 1390 +Bica_LTR LTR Gypsy 125 +BLASTOPIA_I-int LTR Gypsy 9540 +BLASTOPIA_LTR LTR Gypsy 478 +BLOOD_I-int LTR Gypsy 17222 +BLOOD_LTR LTR Gypsy 746 +BS LINE Jockey 5001 +BS2 LINE Jockey 4991 +BS3_DM LINE Jockey 877 +BS4_DM LINE Jockey 21 +BURDOCK_I-int LTR Gypsy 3332 +BURDOCK_LTR LTR Gypsy 370 +Chimpo_I-int LTR Gypsy 1060 +Chimpo_LTR LTR Gypsy 120 +Chouto_I-int LTR Gypsy 1304 +Chouto_LTR LTR Gypsy 281 +CIRCE LTR Gypsy 3323 +Copia_I-int LTR Copia 26733 +Copia_LTR LTR Copia 1129 +Copia1-I_DM LTR Copia 3518 +Copia1-LTR_DM LTR Copia 566 +Copia2_I-int LTR Copia 3455 +Copia2_LTR_DM LTR Copia 486 +DIVER_I-int LTR Pao 15627 +DIVER_LTR LTR Pao 429 +DIVER2_I-int LTR Pao 5627 +DIVER2_LTR LTR Pao 535 +DM1731_I-int LTR Copia 4881 +DM1731_LTR LTR Copia 440 +DM176_I-int LTR Gypsy 2813 +DM176_LTR LTR Gypsy 872 +DM297_I-int LTR Gypsy 11530 +DM297_LTR LTR Gypsy 1478 +DM412 LTR Gypsy 23566 +DM412B_LTR LTR Gypsy 2910 +DMCR1A LINE CR1 17957 +DMLTR5 LTR Gypsy 160 +DMRP1 Unknown Unknown 227 +DMRPR Unknown Unknown 187 +DMRT1A LINE R1 3540 +DMRT1B LINE R1 7119 +DMRT1C LINE R1 2087 +DMTOM1_LTR LTR Gypsy 1012 +DNAREP1_DM RC Helitron 63954 +DOC LINE Jockey 16414 +DOC2_DM LINE Jockey 4538 +DOC3_DM LINE Jockey 10659 +DOC4_DM LINE Jockey 830 +DOC5_DM LINE Jockey 2183 +DOC6_DM LINE Jockey 1240 +FB4_DM DNA TcMar-Tc1 6939 +FROGGER_I-int LTR Copia 1361 +FROGGER_LTR LTR Copia 54 +FTZ_DM Unknown Unknown 0 +FUSHI_DM Unknown Unknown 0 +FW2_DM LINE Jockey 13847 +FW3_DM LINE Jockey 913 +G_DM LINE Jockey 8035 +G2_DM LINE Jockey 1132 +G3_DM LINE Jockey 556 +G4_DM LINE Jockey 3407 +G5_DM LINE Jockey 2551 +G5A_DM LINE Jockey 1595 +G6_DM LINE Jockey 3473 +G7_DM LINE Jockey 98 +GTWIN_I-int LTR Gypsy 5054 +GTWIN_LTR LTR Gypsy 467 +Gypsy_I-int LTR Gypsy 5634 +Gypsy_LTR LTR Gypsy 917 +Gypsy1-I_DM LTR Gypsy 6297 +Gypsy1-LTR_DM LTR Gypsy 795 +Gypsy10_I-int LTR Gypsy 1930 +Gypsy10_LTR LTR Gypsy 368 +Gypsy11_I-int LTR Gypsy 560 +Gypsy11_LTR LTR Gypsy 149 +Gypsy12_I-int LTR Gypsy 9627 +Gypsy12_LTR LTR Gypsy 5934 +Gypsy12A_LTR LTR Gypsy 2242 +Gypsy2_I-int LTR Gypsy 3453 +Gypsy2_LTR LTR Gypsy 485 +Gypsy2-I_DM LTR Gypsy 3896 +Gypsy2-LTR_DM LTR Gypsy 690 +Gypsy3_I-int LTR Gypsy 2753 +Gypsy3_LTR LTR Gypsy 447 +Gypsy4_I-int LTR Gypsy 10056 +Gypsy4_LTR LTR Gypsy 194 +Gypsy5_I-int LTR Gypsy 2186 +Gypsy5_LTR LTR Gypsy 451 +Gypsy6_I-int LTR Gypsy 6746 +Gypsy6_LTR LTR Gypsy 484 +Gypsy6A_LTR LTR Gypsy 573 +Gypsy7_I-int LTR Gypsy 1009 +Gypsy7_LTR LTR Gypsy 87 +Gypsy8_I-int LTR Gypsy 4083 +Gypsy8_LTR LTR Gypsy 1241 +Gypsy9_I-int LTR Gypsy 474 +Gypsy9_LTR LTR Gypsy 42 +HELENA_RT LINE Jockey 627 +Helitron1_DM RC Helitron 6 +HETA LINE Jockey 24397 +HMSBEAGLE_I-int LTR Gypsy 5908 +HOBO DNA hAT-hobo 4404 +I_DM LINE I 7013 +IDEFIX_I-int LTR Gypsy 5547 +IDEFIX_LTR LTR Gypsy 1844 +Invader1_I-int LTR Gypsy 1672 +Invader1_LTR LTR Gypsy 1931 +Invader2_I-int LTR Gypsy 5510 +Invader2_LTR LTR Gypsy 472 +Invader3_I-int LTR Gypsy 3722 +Invader3_LTR LTR Gypsy 608 +Invader4_I-int LTR Gypsy 1219 +Invader4_LTR LTR Gypsy 1228 +Invader5_I-int LTR Gypsy 335 +Invader5_LTR LTR Gypsy 64 +Invader6_I-int LTR Gypsy 6701 +Invader6_LTR LTR Gypsy 588 +IVK_DM LINE I 2921 +Jockey2 LINE Jockey 1588 +LINEJ1_DM LINE Jockey 6329 +LmeSINE1c SINE tRNA-Deu-L2 1414 +LOOPER1_DM DNA PiggyBac 589 +LSU-rRNA_Cel rRNA rRNA 326925 +LSU-rRNA_Dme rRNA rRNA 3078755 +LSU-rRNA_Hsa rRNA rRNA 0 +M4DM DNA CMC-Transib 1650 +Mariner2_DM DNA TcMar-Tc1 1591 +MAX_I-int LTR Pao 9201 +MAX_LTR LTR Pao 753 +MDG1_I-int LTR Gypsy 13740 +MDG1_LTR LTR Gypsy 582 +MDG3_I-int LTR Gypsy 4971 +MDG3_LTR LTR Gypsy 848 +MICROPIA_I-int LTR Gypsy 10355 +MICROPIA_LTR LTR Gypsy 863 +MINOS DNA TcMar-Tc1 226 +MuDR-1_DEl DNA MULE-NOF 9 +NINJA_I-int LTR Pao 4503 +NINJA_LTR LTR Pao 406 +NOF_FB DNA MULE-NOF 960 +NOMAD_I-int LTR Gypsy 11594 +NOMAD_LTR LTR Gypsy 822 +NTS_DM Other Other 36205 +P-1_DY DNA P 2 +PLACW_DM DNA P 127 +POGO DNA TcMar-Pogo 2492 +POGON1 DNA TcMar-Pogo 403 +PROTOP DNA P 4353 +PROTOP_A DNA P 3384 +PROTOP_B DNA P 8285 +QUASIMODO_I-int LTR Gypsy 13018 +QUASIMODO_LTR LTR Gypsy 1174 +QUASIMODO2-I_DM LTR Gypsy 2225 +QUASIMODO2-LTR_DM LTR Gypsy 200 +R1_DM LINE R1 5407 +R1-2_DM LINE R1 177 +R2_DM LINE R2 8407 +ROO_I-int LTR Pao 28034 +ROO_LTR LTR Pao 1851 +ROOA_I-int LTR Pao 4589 +ROOA_LTR LTR Pao 483 +ROVER-I_DM LTR Gypsy 5589 +ROVER-LTR_DM LTR Gypsy 415 +S_DM DNA TcMar-Tc1 3476 +S2_DM DNA TcMar-Tc1 733 +SSU-rRNA_Cel rRNA rRNA 2183 +SSU-rRNA_Dme rRNA rRNA 4153 +SSU-rRNA_Hsa rRNA rRNA 172100 +Stalker2_I-int LTR Gypsy 12474 +Stalker2_LTR LTR Gypsy 672 +Stalker3_LTR LTR Gypsy 439 +STALKER4_I-int LTR Gypsy 5741 +STALKER4_LTR LTR Gypsy 1210 +TABOR_I-int LTR Gypsy 3081 +TABOR_LTR LTR Gypsy 273 +TAHRE LINE Jockey 3914 +TART_B1 LINE Jockey 21513 +TART-A LINE Jockey 3408 +TC1_DM DNA TcMar-Tc1 1960 +TC1-2_DM DNA TcMar-Tc1 3948 +TIRANT_I-int LTR Gypsy 8559 +TIRANT_LTR LTR Gypsy 1279 +TLD2 LTR Gypsy 17 +TOM_I-int LTR Gypsy 2311 +Transib-N1_DM DNA CMC-Transib 371 +TRANSIB1 DNA CMC-Transib 2116 +TRANSIB2 DNA CMC-Transib 3076 +TRANSIB3 DNA CMC-Transib 1132 +TRANSIB4 DNA CMC-Transib 571 +Transib5 DNA CMC-Transib 965 +TRANSPAC_I-int LTR Gypsy 14982 +TRANSPAC_LTR LTR Gypsy 555 +XDMR Unknown Unknown 1440 +XDMR_DM Unknown Unknown 4328 +ZAM_I-int LTR Gypsy 4426 +ZAM_LTR LTR Gypsy 225