Mercurial > repos > artbio > repenrich2
diff test-data/354_fraction_counts.tab @ 0:4905a332a094 draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/repenrich2 commit 73721d980c1f422dc880d80f61e44d270992e537
| author | artbio |
|---|---|
| date | Sat, 20 Apr 2024 11:56:53 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/354_fraction_counts.tab Sat Apr 20 11:56:53 2024 +0000 @@ -0,0 +1,210 @@ +5S_DM RNA RNA 6317 +ACCORD_I-int LTR Gypsy 2723 +ACCORD_LTR LTR Gypsy 295 +ACCORD2_I-int LTR Gypsy 2934 +ACCORD2_LTR LTR Gypsy 235 +ALA_DM Unknown Unknown 5 +ARS406_DM Unknown Unknown 563 +Baggins1 LINE LOA 5136 +BARI_DM DNA TcMar-Tc1 990 +BARI1 DNA TcMar-Tc1 395 +BATUMI_I-int LTR Pao 6395 +BATUMI_LTR LTR Pao 554 +BEL_I-int LTR Pao 23757 +BEL_LTR LTR Pao 875 +Bica_I-int LTR Gypsy 1852 +Bica_LTR LTR Gypsy 140 +BLASTOPIA_I-int LTR Gypsy 10309 +BLASTOPIA_LTR LTR Gypsy 550 +BLOOD_I-int LTR Gypsy 22330 +BLOOD_LTR LTR Gypsy 748 +BS LINE Jockey 7296 +BS2 LINE Jockey 5595 +BS3_DM LINE Jockey 1252 +BS4_DM LINE Jockey 34 +BURDOCK_I-int LTR Gypsy 3119 +BURDOCK_LTR LTR Gypsy 287 +Chimpo_I-int LTR Gypsy 1288 +Chimpo_LTR LTR Gypsy 94 +Chouto_I-int LTR Gypsy 1690 +Chouto_LTR LTR Gypsy 299 +CIRCE LTR Gypsy 3767 +Copia_I-int LTR Copia 27612 +Copia_LTR LTR Copia 1408 +Copia1-I_DM LTR Copia 3588 +Copia1-LTR_DM LTR Copia 771 +Copia2_I-int LTR Copia 4218 +Copia2_LTR_DM LTR Copia 891 +DIVER_I-int LTR Pao 13178 +DIVER_LTR LTR Pao 469 +DIVER2_I-int LTR Pao 6679 +DIVER2_LTR LTR Pao 793 +DM1731_I-int LTR Copia 5180 +DM1731_LTR LTR Copia 577 +DM176_I-int LTR Gypsy 3627 +DM176_LTR LTR Gypsy 899 +DM297_I-int LTR Gypsy 11837 +DM297_LTR LTR Gypsy 1489 +DM412 LTR Gypsy 24086 +DM412B_LTR LTR Gypsy 3078 +DMCR1A LINE CR1 20380 +DMLTR5 LTR Gypsy 161 +DMRP1 Unknown Unknown 262 +DMRPR Unknown Unknown 128 +DMRT1A LINE R1 4456 +DMRT1B LINE R1 9706 +DMRT1C LINE R1 2530 +DMTOM1_LTR LTR Gypsy 1004 +DNAREP1_DM RC Helitron 67821 +DOC LINE Jockey 17883 +DOC2_DM LINE Jockey 4438 +DOC3_DM LINE Jockey 11941 +DOC4_DM LINE Jockey 813 +DOC5_DM LINE Jockey 3037 +DOC6_DM LINE Jockey 1259 +FB4_DM DNA TcMar-Tc1 7149 +FROGGER_I-int LTR Copia 1611 +FROGGER_LTR LTR Copia 41 +FTZ_DM Unknown Unknown 0 +FUSHI_DM Unknown Unknown 0 +FW2_DM LINE Jockey 14234 +FW3_DM LINE Jockey 831 +G_DM LINE Jockey 8905 +G2_DM LINE Jockey 1328 +G3_DM LINE Jockey 797 +G4_DM LINE Jockey 3668 +G5_DM LINE Jockey 2601 +G5A_DM LINE Jockey 1804 +G6_DM LINE Jockey 4827 +G7_DM LINE Jockey 162 +GTWIN_I-int LTR Gypsy 5448 +GTWIN_LTR LTR Gypsy 598 +Gypsy_I-int LTR Gypsy 6822 +Gypsy_LTR LTR Gypsy 1306 +Gypsy1-I_DM LTR Gypsy 8160 +Gypsy1-LTR_DM LTR Gypsy 1042 +Gypsy10_I-int LTR Gypsy 2258 +Gypsy10_LTR LTR Gypsy 314 +Gypsy11_I-int LTR Gypsy 671 +Gypsy11_LTR LTR Gypsy 134 +Gypsy12_I-int LTR Gypsy 9778 +Gypsy12_LTR LTR Gypsy 6292 +Gypsy12A_LTR LTR Gypsy 3059 +Gypsy2_I-int LTR Gypsy 3190 +Gypsy2_LTR LTR Gypsy 479 +Gypsy2-I_DM LTR Gypsy 4606 +Gypsy2-LTR_DM LTR Gypsy 966 +Gypsy3_I-int LTR Gypsy 3399 +Gypsy3_LTR LTR Gypsy 566 +Gypsy4_I-int LTR Gypsy 12113 +Gypsy4_LTR LTR Gypsy 274 +Gypsy5_I-int LTR Gypsy 2448 +Gypsy5_LTR LTR Gypsy 651 +Gypsy6_I-int LTR Gypsy 7489 +Gypsy6_LTR LTR Gypsy 428 +Gypsy6A_LTR LTR Gypsy 617 +Gypsy7_I-int LTR Gypsy 1256 +Gypsy7_LTR LTR Gypsy 112 +Gypsy8_I-int LTR Gypsy 4809 +Gypsy8_LTR LTR Gypsy 1311 +Gypsy9_I-int LTR Gypsy 504 +Gypsy9_LTR LTR Gypsy 51 +HELENA_RT LINE Jockey 653 +Helitron1_DM RC Helitron 3 +HETA LINE Jockey 23025 +HMSBEAGLE_I-int LTR Gypsy 7239 +HOBO DNA hAT-hobo 5031 +I_DM LINE I 7987 +IDEFIX_I-int LTR Gypsy 6193 +IDEFIX_LTR LTR Gypsy 2191 +Invader1_I-int LTR Gypsy 1832 +Invader1_LTR LTR Gypsy 3346 +Invader2_I-int LTR Gypsy 6823 +Invader2_LTR LTR Gypsy 492 +Invader3_I-int LTR Gypsy 4667 +Invader3_LTR LTR Gypsy 657 +Invader4_I-int LTR Gypsy 1439 +Invader4_LTR LTR Gypsy 1420 +Invader5_I-int LTR Gypsy 416 +Invader5_LTR LTR Gypsy 69 +Invader6_I-int LTR Gypsy 6931 +Invader6_LTR LTR Gypsy 649 +IVK_DM LINE I 3349 +Jockey2 LINE Jockey 1770 +LINEJ1_DM LINE Jockey 7025 +LmeSINE1c SINE tRNA-Deu-L2 599 +LOOPER1_DM DNA PiggyBac 821 +LSU-rRNA_Cel rRNA rRNA 520168 +LSU-rRNA_Dme rRNA rRNA 3659329 +LSU-rRNA_Hsa rRNA rRNA 5 +M4DM DNA CMC-Transib 1727 +Mariner2_DM DNA TcMar-Tc1 2011 +MAX_I-int LTR Pao 12395 +MAX_LTR LTR Pao 1017 +MDG1_I-int LTR Gypsy 16315 +MDG1_LTR LTR Gypsy 690 +MDG3_I-int LTR Gypsy 5392 +MDG3_LTR LTR Gypsy 1037 +MICROPIA_I-int LTR Gypsy 10149 +MICROPIA_LTR LTR Gypsy 797 +MINOS DNA TcMar-Tc1 173 +MuDR-1_DEl DNA MULE-NOF 6 +NINJA_I-int LTR Pao 5274 +NINJA_LTR LTR Pao 491 +NOF_FB DNA MULE-NOF 1272 +NOMAD_I-int LTR Gypsy 16469 +NOMAD_LTR LTR Gypsy 619 +NTS_DM Other Other 65954 +P-1_DY DNA P 8 +PLACW_DM DNA P 149 +POGO DNA TcMar-Pogo 2427 +POGON1 DNA TcMar-Pogo 331 +PROTOP DNA P 4942 +PROTOP_A DNA P 3533 +PROTOP_B DNA P 8690 +QUASIMODO_I-int LTR Gypsy 14906 +QUASIMODO_LTR LTR Gypsy 1332 +QUASIMODO2-I_DM LTR Gypsy 2717 +QUASIMODO2-LTR_DM LTR Gypsy 313 +R1_DM LINE R1 7343 +R1-2_DM LINE R1 267 +R2_DM LINE R2 15327 +ROO_I-int LTR Pao 31793 +ROO_LTR LTR Pao 1639 +ROOA_I-int LTR Pao 4985 +ROOA_LTR LTR Pao 400 +ROVER-I_DM LTR Gypsy 6513 +ROVER-LTR_DM LTR Gypsy 564 +S_DM DNA TcMar-Tc1 3612 +S2_DM DNA TcMar-Tc1 765 +SSU-rRNA_Cel rRNA rRNA 3463 +SSU-rRNA_Dme rRNA rRNA 7113 +SSU-rRNA_Hsa rRNA rRNA 318045 +Stalker2_I-int LTR Gypsy 12252 +Stalker2_LTR LTR Gypsy 726 +Stalker3_LTR LTR Gypsy 593 +STALKER4_I-int LTR Gypsy 6207 +STALKER4_LTR LTR Gypsy 1292 +TABOR_I-int LTR Gypsy 3947 +TABOR_LTR LTR Gypsy 384 +TAHRE LINE Jockey 4560 +TART_B1 LINE Jockey 25248 +TART-A LINE Jockey 3697 +TC1_DM DNA TcMar-Tc1 1840 +TC1-2_DM DNA TcMar-Tc1 3807 +TIRANT_I-int LTR Gypsy 10917 +TIRANT_LTR LTR Gypsy 1371 +TLD2 LTR Gypsy 65 +TOM_I-int LTR Gypsy 2563 +Transib-N1_DM DNA CMC-Transib 308 +TRANSIB1 DNA CMC-Transib 2082 +TRANSIB2 DNA CMC-Transib 3197 +TRANSIB3 DNA CMC-Transib 1184 +TRANSIB4 DNA CMC-Transib 635 +Transib5 DNA CMC-Transib 1123 +TRANSPAC_I-int LTR Gypsy 9674 +TRANSPAC_LTR LTR Gypsy 538 +XDMR Unknown Unknown 1249 +XDMR_DM Unknown Unknown 3317 +ZAM_I-int LTR Gypsy 5129 +ZAM_LTR LTR Gypsy 259