Mercurial > repos > artbio > repenrich2
diff test-data/356_fraction_counts.tab @ 0:4905a332a094 draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/repenrich2 commit 73721d980c1f422dc880d80f61e44d270992e537
| author | artbio |
|---|---|
| date | Sat, 20 Apr 2024 11:56:53 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/356_fraction_counts.tab Sat Apr 20 11:56:53 2024 +0000 @@ -0,0 +1,210 @@ +5S_DM RNA RNA 6331 +ACCORD_I-int LTR Gypsy 4103 +ACCORD_LTR LTR Gypsy 790 +ACCORD2_I-int LTR Gypsy 2286 +ACCORD2_LTR LTR Gypsy 213 +ALA_DM Unknown Unknown 9 +ARS406_DM Unknown Unknown 755 +Baggins1 LINE LOA 5500 +BARI_DM DNA TcMar-Tc1 1117 +BARI1 DNA TcMar-Tc1 370 +BATUMI_I-int LTR Pao 4723 +BATUMI_LTR LTR Pao 348 +BEL_I-int LTR Pao 29338 +BEL_LTR LTR Pao 927 +Bica_I-int LTR Gypsy 1561 +Bica_LTR LTR Gypsy 123 +BLASTOPIA_I-int LTR Gypsy 13780 +BLASTOPIA_LTR LTR Gypsy 1038 +BLOOD_I-int LTR Gypsy 27362 +BLOOD_LTR LTR Gypsy 1269 +BS LINE Jockey 5200 +BS2 LINE Jockey 5214 +BS3_DM LINE Jockey 851 +BS4_DM LINE Jockey 8 +BURDOCK_I-int LTR Gypsy 5190 +BURDOCK_LTR LTR Gypsy 543 +Chimpo_I-int LTR Gypsy 1366 +Chimpo_LTR LTR Gypsy 107 +Chouto_I-int LTR Gypsy 1231 +Chouto_LTR LTR Gypsy 162 +CIRCE LTR Gypsy 3676 +Copia_I-int LTR Copia 50888 +Copia_LTR LTR Copia 2612 +Copia1-I_DM LTR Copia 4100 +Copia1-LTR_DM LTR Copia 600 +Copia2_I-int LTR Copia 3614 +Copia2_LTR_DM LTR Copia 747 +DIVER_I-int LTR Pao 24742 +DIVER_LTR LTR Pao 547 +DIVER2_I-int LTR Pao 6446 +DIVER2_LTR LTR Pao 648 +DM1731_I-int LTR Copia 18829 +DM1731_LTR LTR Copia 1274 +DM176_I-int LTR Gypsy 4726 +DM176_LTR LTR Gypsy 560 +DM297_I-int LTR Gypsy 82387 +DM297_LTR LTR Gypsy 6128 +DM412 LTR Gypsy 43689 +DM412B_LTR LTR Gypsy 5607 +DMCR1A LINE CR1 17489 +DMLTR5 LTR Gypsy 189 +DMRP1 Unknown Unknown 295 +DMRPR Unknown Unknown 221 +DMRT1A LINE R1 3797 +DMRT1B LINE R1 9003 +DMRT1C LINE R1 1907 +DMTOM1_LTR LTR Gypsy 1403 +DNAREP1_DM RC Helitron 76851 +DOC LINE Jockey 29082 +DOC2_DM LINE Jockey 4511 +DOC3_DM LINE Jockey 11067 +DOC4_DM LINE Jockey 1030 +DOC5_DM LINE Jockey 1793 +DOC6_DM LINE Jockey 1718 +FB4_DM DNA TcMar-Tc1 7840 +FROGGER_I-int LTR Copia 1075 +FROGGER_LTR LTR Copia 85 +FTZ_DM Unknown Unknown 0 +FUSHI_DM Unknown Unknown 0 +FW2_DM LINE Jockey 17723 +FW3_DM LINE Jockey 647 +G_DM LINE Jockey 10948 +G2_DM LINE Jockey 1235 +G3_DM LINE Jockey 480 +G4_DM LINE Jockey 2223 +G5_DM LINE Jockey 2714 +G5A_DM LINE Jockey 1578 +G6_DM LINE Jockey 2874 +G7_DM LINE Jockey 1949 +GTWIN_I-int LTR Gypsy 7568 +GTWIN_LTR LTR Gypsy 2533 +Gypsy_I-int LTR Gypsy 24082 +Gypsy_LTR LTR Gypsy 3771 +Gypsy1-I_DM LTR Gypsy 36962 +Gypsy1-LTR_DM LTR Gypsy 1432 +Gypsy10_I-int LTR Gypsy 2236 +Gypsy10_LTR LTR Gypsy 363 +Gypsy11_I-int LTR Gypsy 487 +Gypsy11_LTR LTR Gypsy 159 +Gypsy12_I-int LTR Gypsy 5002 +Gypsy12_LTR LTR Gypsy 7572 +Gypsy12A_LTR LTR Gypsy 2436 +Gypsy2_I-int LTR Gypsy 4226 +Gypsy2_LTR LTR Gypsy 869 +Gypsy2-I_DM LTR Gypsy 7374 +Gypsy2-LTR_DM LTR Gypsy 1155 +Gypsy3_I-int LTR Gypsy 5766 +Gypsy3_LTR LTR Gypsy 681 +Gypsy4_I-int LTR Gypsy 13114 +Gypsy4_LTR LTR Gypsy 390 +Gypsy5_I-int LTR Gypsy 2834 +Gypsy5_LTR LTR Gypsy 502 +Gypsy6_I-int LTR Gypsy 11381 +Gypsy6_LTR LTR Gypsy 1423 +Gypsy6A_LTR LTR Gypsy 793 +Gypsy7_I-int LTR Gypsy 1162 +Gypsy7_LTR LTR Gypsy 80 +Gypsy8_I-int LTR Gypsy 4176 +Gypsy8_LTR LTR Gypsy 1467 +Gypsy9_I-int LTR Gypsy 429 +Gypsy9_LTR LTR Gypsy 62 +HELENA_RT LINE Jockey 934 +Helitron1_DM RC Helitron 0 +HETA LINE Jockey 22459 +HMSBEAGLE_I-int LTR Gypsy 7863 +HOBO DNA hAT-hobo 4375 +I_DM LINE I 11479 +IDEFIX_I-int LTR Gypsy 7222 +IDEFIX_LTR LTR Gypsy 2538 +Invader1_I-int LTR Gypsy 2993 +Invader1_LTR LTR Gypsy 2525 +Invader2_I-int LTR Gypsy 5970 +Invader2_LTR LTR Gypsy 417 +Invader3_I-int LTR Gypsy 4411 +Invader3_LTR LTR Gypsy 506 +Invader4_I-int LTR Gypsy 1888 +Invader4_LTR LTR Gypsy 1624 +Invader5_I-int LTR Gypsy 191 +Invader5_LTR LTR Gypsy 47 +Invader6_I-int LTR Gypsy 6566 +Invader6_LTR LTR Gypsy 312 +IVK_DM LINE I 3025 +Jockey2 LINE Jockey 1823 +LINEJ1_DM LINE Jockey 24891 +LmeSINE1c SINE tRNA-Deu-L2 627 +LOOPER1_DM DNA PiggyBac 220 +LSU-rRNA_Cel rRNA rRNA 363697 +LSU-rRNA_Dme rRNA rRNA 5583038 +LSU-rRNA_Hsa rRNA rRNA 15 +M4DM DNA CMC-Transib 1880 +Mariner2_DM DNA TcMar-Tc1 1096 +MAX_I-int LTR Pao 8914 +MAX_LTR LTR Pao 958 +MDG1_I-int LTR Gypsy 16306 +MDG1_LTR LTR Gypsy 650 +MDG3_I-int LTR Gypsy 7857 +MDG3_LTR LTR Gypsy 926 +MICROPIA_I-int LTR Gypsy 6941 +MICROPIA_LTR LTR Gypsy 460 +MINOS DNA TcMar-Tc1 273 +MuDR-1_DEl DNA MULE-NOF 32 +NINJA_I-int LTR Pao 3676 +NINJA_LTR LTR Pao 297 +NOF_FB DNA MULE-NOF 228 +NOMAD_I-int LTR Gypsy 11614 +NOMAD_LTR LTR Gypsy 757 +NTS_DM Other Other 56043 +P-1_DY DNA P 13 +PLACW_DM DNA P 277 +POGO DNA TcMar-Pogo 2909 +POGON1 DNA TcMar-Pogo 641 +PROTOP DNA P 4775 +PROTOP_A DNA P 4465 +PROTOP_B DNA P 9371 +QUASIMODO_I-int LTR Gypsy 17910 +QUASIMODO_LTR LTR Gypsy 1625 +QUASIMODO2-I_DM LTR Gypsy 3977 +QUASIMODO2-LTR_DM LTR Gypsy 298 +R1_DM LINE R1 15424 +R1-2_DM LINE R1 184 +R2_DM LINE R2 54042 +ROO_I-int LTR Pao 34023 +ROO_LTR LTR Pao 2219 +ROOA_I-int LTR Pao 4103 +ROOA_LTR LTR Pao 435 +ROVER-I_DM LTR Gypsy 6947 +ROVER-LTR_DM LTR Gypsy 415 +S_DM DNA TcMar-Tc1 4974 +S2_DM DNA TcMar-Tc1 716 +SSU-rRNA_Cel rRNA rRNA 3855 +SSU-rRNA_Dme rRNA rRNA 9958 +SSU-rRNA_Hsa rRNA rRNA 563673 +Stalker2_I-int LTR Gypsy 10966 +Stalker2_LTR LTR Gypsy 790 +Stalker3_LTR LTR Gypsy 543 +STALKER4_I-int LTR Gypsy 7287 +STALKER4_LTR LTR Gypsy 2040 +TABOR_I-int LTR Gypsy 5504 +TABOR_LTR LTR Gypsy 443 +TAHRE LINE Jockey 3806 +TART_B1 LINE Jockey 13382 +TART-A LINE Jockey 5092 +TC1_DM DNA TcMar-Tc1 2618 +TC1-2_DM DNA TcMar-Tc1 4438 +TIRANT_I-int LTR Gypsy 23165 +TIRANT_LTR LTR Gypsy 3225 +TLD2 LTR Gypsy 33 +TOM_I-int LTR Gypsy 6929 +Transib-N1_DM DNA CMC-Transib 366 +TRANSIB1 DNA CMC-Transib 1229 +TRANSIB2 DNA CMC-Transib 3357 +TRANSIB3 DNA CMC-Transib 1802 +TRANSIB4 DNA CMC-Transib 364 +Transib5 DNA CMC-Transib 973 +TRANSPAC_I-int LTR Gypsy 28474 +TRANSPAC_LTR LTR Gypsy 1457 +XDMR Unknown Unknown 1771 +XDMR_DM Unknown Unknown 4049 +ZAM_I-int LTR Gypsy 6896 +ZAM_LTR LTR Gypsy 377