view test-data/chrY_single_fraction_counts.tab @ 7:61e0404f0d76 draft

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/repenrich2 commit 067aa46ea7482d640369b95d5b3dabec5793396b
author artbio
date Tue, 23 Apr 2024 21:44:44 +0000
parents 388a47ca4199
children 567549a49eb2
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A-rich	Low_complexity	Low_complexity	4.72
ACCORD2_I-int	LTR	Gypsy	4.72
ACCORD2_LTR	LTR	Gypsy	4.72
ACCORD_I-int	LTR	Gypsy	4.72
BARI1	DNA	TcMar-Tc1	4.72
BATUMI_LTR	LTR	Pao	4.72
BS	LINE	Jockey	4.72
BS2	LINE	Jockey	33.72
BURDOCK_I-int	LTR	Gypsy	4.72
Baggins1	LINE	LOA	4.72
Bica_I-int	LTR	Gypsy	23.72
Bica_LTR	LTR	Gypsy	4.72
CIRCE	LTR	Gypsy	4.72
Chouto_I-int	LTR	Gypsy	4.72
Copia1-I_DM	LTR	Copia	4.72
Copia_I-int	LTR	Copia	12656.72
Copia_LTR	LTR	Copia	138.72
DIVER2_I-int	LTR	Pao	5.72
DIVER2_LTR	LTR	Pao	4.72
DM1731_I-int	LTR	Copia	7.72
DM1731_LTR	LTR	Copia	4.72
DM176_I-int	LTR	Gypsy	4.72
DM412	LTR	Gypsy	4.72
DM412B_LTR	LTR	Gypsy	4.72
DMCR1A	LINE	CR1	6.72
DMLTR5	LTR	Gypsy	4.72
DMRT1A	LINE	R1	4.72
DMRT1B	LINE	R1	39.72
DMRT1C	LINE	R1	4.72
DNAREP1_DM	RC	Helitron	4.72
DOC2_DM	LINE	Jockey	4.72
DOC3_DM	LINE	Jockey	4.72
FB4_DM	DNA	TcMar-Tc1	19.72
FROGGER_I-int	LTR	Copia	4.72
FW2_DM	LINE	Jockey	4.72
G3_DM	LINE	Jockey	4.72
G5A_DM	LINE	Jockey	4.72
G5_DM	LINE	Jockey	4.72
G6_DM	LINE	Jockey	4.72
GA-rich	Low_complexity	Low_complexity	4.72
GTWIN_I-int	LTR	Gypsy	4.72
G_DM	LINE	Jockey	4.72
Gypsy11_I-int	LTR	Gypsy	4.72
Gypsy11_LTR	LTR	Gypsy	4.72
Gypsy12_LTR	LTR	Gypsy	4.72
Gypsy2-I_DM	LTR	Gypsy	5.72
Gypsy2-LTR_DM	LTR	Gypsy	4.72
Gypsy3_LTR	LTR	Gypsy	4.72
Gypsy4_I-int	LTR	Gypsy	4.72
Gypsy5_I-int	LTR	Gypsy	4.72
Gypsy6A_LTR	LTR	Gypsy	4.72
Gypsy6_I-int	LTR	Gypsy	16.72
Gypsy8_I-int	LTR	Gypsy	4.72
Gypsy8_LTR	LTR	Gypsy	4.72
Gypsy9_I-int	LTR	Gypsy	4.72
Gypsy_I-int	LTR	Gypsy	19.72
Gypsy_LTR	LTR	Gypsy	4.72
HELENA_RT	LINE	Jockey	4.72
HETA	LINE	Jockey	16.72
HMSBEAGLE_I-int	LTR	Gypsy	5.72
IDEFIX_I-int	LTR	Gypsy	4.72
IDEFIX_LTR	LTR	Gypsy	4.72
Invader1_I-int	LTR	Gypsy	4.72
Invader1_LTR	LTR	Gypsy	4.72
Invader2_I-int	LTR	Gypsy	4.72
Invader4_I-int	LTR	Gypsy	4.72
Invader4_LTR	LTR	Gypsy	4.72
Invader5_I-int	LTR	Gypsy	4.72
Invader5_LTR	LTR	Gypsy	4.72
Invader6_I-int	LTR	Gypsy	4.72
Invader6_LTR	LTR	Gypsy	4.72
MAX_I-int	LTR	Pao	31.72
MAX_LTR	LTR	Pao	5.72
MDG1_I-int	LTR	Gypsy	4.72
MDG1_LTR	LTR	Gypsy	4.72
MDG3_I-int	LTR	Gypsy	74.72
MDG3_LTR	LTR	Gypsy	4.72
MICROPIA_I-int	LTR	Gypsy	4.72
MICROPIA_LTR	LTR	Gypsy	4.72
Mariner2_DM	DNA	TcMar-Tc1	4.72
NINJA_I-int	LTR	Pao	4.72
NOMAD_I-int	LTR	Gypsy	4.72
PROTOP_A	DNA	P	22.72
PROTOP_B	DNA	P	4.72
QUASIMODO2-I_DM	LTR	Gypsy	23.72
QUASIMODO2-LTR_DM	LTR	Gypsy	4.72
QUASIMODO_I-int	LTR	Gypsy	7.72
QUASIMODO_LTR	LTR	Gypsy	5.72
R1_DM	LINE	R1	4.72
ROOA_I-int	LTR	Pao	4.72
ROOA_LTR	LTR	Pao	4.72
ROVER-I_DM	LTR	Gypsy	192.72
ROVER-LTR_DM	LTR	Gypsy	5.72
S2_DM	DNA	TcMar-Tc1	4.72
STALKER4_I-int	LTR	Gypsy	32.72
STALKER4_LTR	LTR	Gypsy	4.72
S_DM	DNA	TcMar-Tc1	29.72
Stalker2_I-int	LTR	Gypsy	36.72
Stalker2_LTR	LTR	Gypsy	6.72
TART-A	LINE	Jockey	6.72
TART_B1	LINE	Jockey	14.72
TC1-2_DM	DNA	TcMar-Tc1	4.72
TC1_DM	DNA	TcMar-Tc1	4.72
TLD2	LTR	Gypsy	4.72
TRANSIB1	DNA	CMC-Transib	4.72
TRANSIB2	DNA	CMC-Transib	16.72
ZAM_I-int	LTR	Gypsy	4.72
_AACACA_n	Simple_repeat	Simple_repeat	4.72
_AAT_n	Simple_repeat	Simple_repeat	4.72
_ACAATAG_n	Simple_repeat	Simple_repeat	4.72
_ACC_n	Simple_repeat	Simple_repeat	4.72
_AGAGAAG_n	Simple_repeat	Simple_repeat	4.72
_AGAGA_n	Simple_repeat	Simple_repeat	4.72
_ATAAT_n	Simple_repeat	Simple_repeat	4.72
_ATATATT_n	Simple_repeat	Simple_repeat	4.72
_ATATTAT_n	Simple_repeat	Simple_repeat	4.72
_ATTTTT_n	Simple_repeat	Simple_repeat	4.72
_ATT_n	Simple_repeat	Simple_repeat	4.72
_AT_n	Simple_repeat	Simple_repeat	4.72
_A_n	Simple_repeat	Simple_repeat	4.72
_CATA_n	Simple_repeat	Simple_repeat	4.72
_CTTTT_n	Simple_repeat	Simple_repeat	4.72
_GAGAA_n	Simple_repeat	Simple_repeat	4.72
_GCCTTT_n	Simple_repeat	Simple_repeat	4.72
_TAATAT_n	Simple_repeat	Simple_repeat	4.72
_TAATA_n	Simple_repeat	Simple_repeat	4.72
_TATAAAA_n	Simple_repeat	Simple_repeat	4.72
_TATAA_n	Simple_repeat	Simple_repeat	4.72
_TATCATG_n	Simple_repeat	Simple_repeat	4.72
_TA_n	Simple_repeat	Simple_repeat	4.72
_TGTTG_n	Simple_repeat	Simple_repeat	4.72
_TTATATA_n	Simple_repeat	Simple_repeat	4.72
_TTATAT_n	Simple_repeat	Simple_repeat	4.72
_TTATA_n	Simple_repeat	Simple_repeat	4.72
_TTA_n	Simple_repeat	Simple_repeat	4.72
_TTCTT_n	Simple_repeat	Simple_repeat	4.72
_TTC_n	Simple_repeat	Simple_repeat	4.72
_TTTAT_n	Simple_repeat	Simple_repeat	4.72
_TTTA_n	Simple_repeat	Simple_repeat	4.72
_TTTC_n	Simple_repeat	Simple_repeat	4.72
_TTTGA_n	Simple_repeat	Simple_repeat	4.72
_TTTTAG_n	Simple_repeat	Simple_repeat	4.72
_TTTTCTT_n	Simple_repeat	Simple_repeat	4.72
_TTTTC_n	Simple_repeat	Simple_repeat	4.72
_T_n	Simple_repeat	Simple_repeat	4.72