Mercurial > repos > artbio > rsem
comparison macros.xml @ 4:1823c8e07d96 draft
planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit a3df058f7bb29ae3d42b85d6e911b68679150c9f
| author | artbio |
|---|---|
| date | Fri, 01 Jun 2018 03:00:34 -0400 |
| parents | 26ead8419b63 |
| children | 835a2f3372b5 |
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| 3:26ead8419b63 | 4:1823c8e07d96 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <macros> | 2 <macros> |
| 3 <token name="@WRAPPER_VERSION@">0.5.4</token> | 3 <token name="@WRAPPER_VERSION@">0.6.1</token> |
| 4 <xml name="rsem_options"> | 4 <xml name="rsem_options"> |
| 5 <param name="seedlength" type="integer" value="25" optional="true" label="Seed length used by the read aligner" help="Providing the correct value for this parameter is important for RSEM's accuracy if the data are single-end reads. RSEM uses this value for Bowtie's seed length parameter. The minimum value is 25. (Default:25)"> | 5 <param name="seedlength" type="integer" value="25" optional="true" label="Seed length used by the read aligner" help="Providing the correct value for this parameter is important for RSEM's accuracy if the data are single-end reads. RSEM uses this value for Bowtie's seed length parameter. The minimum value is 25. (Default:25)"> |
| 6 </param> | 6 </param> |
| 7 <param name="forward_prob" type="select" label="Is the library strand specific?"> | 7 <param name="forward_prob" type="select" label="Is the library strand specific?"> |
| 8 <option value="0.5" selected="true">No</option> | 8 <option value="0.5" selected="true">No</option> |