Mercurial > repos > artbio > rsem

comparison rsem-bwt2.xml @ 7:585c6120dca0 draft

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planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit 8e5c580d93b413f4a0b2ef41218a38f4d27f1e42
author artbio
date Thu, 30 Aug 2018 12:34:13 -0400
parents 45a30e216fec
children f6fc9b92d629
comparison
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6:45a30e216fec 7:585c6120dca0
22 #elif $job.polya.polya_use == 'subset': 22 #elif $job.polya.polya_use == 'subset':
23 --no-polyA-subset $job.polya.no_polya_subset 23 --no-polyA-subset $job.polya.no_polya_subset
24 #if $job.polya.polya_length: 24 #if $job.polya.polya_length:
25 --polyA-length $job.polya.polya_length 25 --polyA-length $job.polya.polya_length
26 #end if 26 #end if
27 #elif $job.polya.polya_use == 'none':
28 --no-polyA
29 #end if 27 #end if
30 $job.ntog 28 $job.ntog
31 #if $job.transcript_to_gene_map: 29 #if $job.transcript_to_gene_map:
32 --transcript-to-gene-map $job.transcript_to_gene_map 30 --transcript-to-gene-map $job.transcript_to_gene_map
33 #end if 31 #end if