Mercurial > repos > artbio > rsem
diff test-data/gene_abundances.tab @ 0:e5e836936d60 draft
planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit d84a0359354698a4b29df12ab581c2618bffcf80
| author | artbio |
|---|---|
| date | Sat, 31 Mar 2018 21:30:07 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/gene_abundances.tab Sat Mar 31 21:30:07 2018 -0400 @@ -0,0 +1,55 @@ +gene_id transcript_id(s) length effective_length expected_count TPM FPKM +ENSG00000185097 ENST00000332831 995.00 895.00 0.00 0.00 0.00 +ENSG00000186092 ENST00000335137 918.00 818.00 0.00 0.00 0.00 +ENSG00000198744 ENST00000416718 547.00 447.00 141.00 97872.44 142409.58 +ENSG00000222623 ENST00000410691 104.00 4.00 0.00 0.00 0.00 +ENSG00000223181 ENST00000411249 104.00 4.00 0.00 0.00 0.00 +ENSG00000223659 ENST00000452176 802.00 702.00 0.00 0.00 0.00 +ENSG00000223972 ENST00000450305,ENST00000456328,ENST00000515242,ENST00000518655 1356.25 1256.25 0.00 0.00 0.00 +ENSG00000224813 ENST00000445840 180.00 80.00 0.00 0.00 0.00 +ENSG00000224956 ENST00000506640 1236.00 1136.00 3.89 1062.90 1546.57 +ENSG00000225630 ENST00000457540 1044.00 944.00 176.00 57848.16 84172.12 +ENSG00000225972 ENST00000416931 372.00 272.00 31.00 35362.39 51454.15 +ENSG00000227232 ENST00000423562,ENST00000438504,ENST00000488147,ENST00000538476,ENST00000541675 1783.00 1683.00 9.00 1659.23 2414.27 +ENSG00000228327 ENST00000428504 1317.00 1217.00 12.67 3231.25 4701.63 +ENSG00000228463 ENST00000335577,ENST00000424587,ENST00000442116,ENST00000448958 1272.21 1172.21 117.13 31002.37 45110.08 +ENSG00000229344 ENST00000427426 682.00 582.00 232.00 123684.09 179966.89 +ENSG00000229376 ENST00000440782 2455.00 2355.00 0.00 0.00 0.00 +ENSG00000229905 ENST00000422528 456.00 356.00 0.00 0.00 0.00 +ENSG00000230021 ENST00000414688,ENST00000419394,ENST00000440200,ENST00000441245,ENST00000447954,ENST00000448605 619.75 519.75 53.90 32178.52 46821.45 +ENSG00000230092 ENST00000447500,ENST00000590817 523.00 423.00 0.00 0.00 0.00 +ENSG00000231709 ENST00000417636 842.00 742.00 0.00 0.00 0.00 +ENSG00000233653 ENST00000432723 2477.00 2377.00 1.79 233.34 339.53 +ENSG00000233750 ENST00000442987 3812.00 3712.00 25.68 2146.64 3123.48 +ENSG00000235146 ENST00000423796,ENST00000450696 504.50 404.50 0.00 0.00 0.00 +ENSG00000235249 ENST00000426406 995.00 895.00 0.00 0.00 0.00 +ENSG00000235373 ENST00000416385 4860.00 4760.00 151.37 9867.04 14357.06 +ENSG00000236601 ENST00000412666,ENST00000450983 516.50 416.50 0.00 0.00 0.00 +ENSG00000236679 ENST00000458203 385.00 285.00 18.53 20178.14 29360.26 +ENSG00000236743 ENST00000441866 676.00 576.00 0.00 0.00 0.00 +ENSG00000237094 ENST00000419160,ENST00000423728,ENST00000425496,ENST00000431321,ENST00000431812,ENST00000432964,ENST00000440038,ENST00000440163,ENST00000453935,ENST00000455207,ENST00000455464,ENST00000599771,ENST00000601486,ENST00000601814 628.34 528.34 68.86 40436.87 58837.78 +ENSG00000237491 ENST00000358533,ENST00000412115,ENST00000429505,ENST00000434264,ENST00000443772,ENST00000457084,ENST00000585745,ENST00000585768,ENST00000585826,ENST00000586288,ENST00000586928,ENST00000587126,ENST00000587530,ENST00000588951,ENST00000589531,ENST00000589899,ENST00000590848,ENST00000591440,ENST00000591702,ENST00000592547,ENST00000593022 394.00 294.00 3.00 3167.34 4608.65 +ENSG00000237613 ENST00000417324,ENST00000461467 590.00 490.00 10.00 6332.06 9213.49 +ENSG00000237683 ENST00000423372 2661.00 2561.00 1.65 199.62 290.46 +ENSG00000237973 ENST00000414273 1543.00 1443.00 483.00 103855.53 151115.29 +ENSG00000238009 ENST00000453576,ENST00000466430,ENST00000471248,ENST00000477740 673.11 573.11 95.23 51558.41 75020.21 +ENSG00000239664 ENST00000357876,ENST00000440196 498.00 398.00 44.40 34610.15 50359.60 +ENSG00000239906 ENST00000493797 323.00 223.00 0.00 0.00 0.00 +ENSG00000239945 ENST00000495576 1319.00 1219.00 6.35 1615.74 2350.99 +ENSG00000240361 ENST00000492842 940.00 840.00 0.00 0.00 0.00 +ENSG00000240409 ENST00000467115 207.00 107.00 44.00 127590.33 185650.66 +ENSG00000240453 ENST00000435300 402.00 302.00 0.00 0.00 0.00 +ENSG00000240618 ENST00000417659 295.00 195.00 0.00 0.00 0.00 +ENSG00000241599 ENST00000496488 457.00 357.00 0.00 0.00 0.00 +ENSG00000241670 ENST00000424429,ENST00000450734 363.00 263.00 1.65 1943.07 2827.26 +ENSG00000241860 ENST00000466557,ENST00000484859,ENST00000490997,ENST00000491962 2018.10 1918.10 176.90 28615.01 41636.35 +ENSG00000243485 ENST00000469289,ENST00000473358,ENST00000607096 461.67 361.67 0.00 0.00 0.00 +ENSG00000248527 ENST00000514057 681.00 581.00 304.00 162347.76 236224.57 +ENSG00000250575 ENST00000514436 1239.00 1139.00 0.00 0.00 0.00 +ENSG00000256186 ENST00000540477 90.00 0.00 0.00 0.00 0.00 +ENSG00000268020 ENST00000594647,ENST00000606857 483.00 383.00 0.00 0.00 0.00 +ENSG00000268663 ENST00000438434 424.00 324.00 0.00 0.00 0.00 +ENSG00000268903 ENST00000494149 755.00 655.00 0.00 0.00 0.00 +ENSG00000269732 ENST00000437905 363.00 263.00 0.00 0.00 0.00 +ENSG00000269831 ENST00000599533 129.00 29.00 2.00 21401.59 31140.45 +ENSG00000269981 ENST00000595919 284.00 184.00 0.00 0.00 0.00