view test-data/eboVir3.gtf @ 9:e00a79cf5f8c draft default tip

"planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit fdb6ccd340e366ef386d69ff344036a83e479b2f"
author artbio
date Tue, 03 Mar 2020 07:28:39 -0500
parents 835a2f3372b5
children
line wrap: on
line source

KM034562v1	eboVir3_ncbiGene	start_codon	470	472	0.000000	+	.	gene_id "NP"; transcript_id "NP"; 
KM034562v1	eboVir3_ncbiGene	CDS	470	2686	0.000000	+	0	gene_id "NP"; transcript_id "NP"; 
KM034562v1	eboVir3_ncbiGene	stop_codon	2687	2689	0.000000	+	.	gene_id "NP"; transcript_id "NP"; 
KM034562v1	eboVir3_ncbiGene	exon	56	3026	0.000000	+	.	gene_id "NP"; transcript_id "NP"; 
KM034562v1	eboVir3_ncbiGene	start_codon	3129	3131	0.000000	+	.	gene_id "VP35"; transcript_id "VP35"; 
KM034562v1	eboVir3_ncbiGene	CDS	3129	4148	0.000000	+	0	gene_id "VP35"; transcript_id "VP35"; 
KM034562v1	eboVir3_ncbiGene	stop_codon	4149	4151	0.000000	+	.	gene_id "VP35"; transcript_id "VP35"; 
KM034562v1	eboVir3_ncbiGene	exon	3032	4407	0.000000	+	.	gene_id "VP35"; transcript_id "VP35"; 
KM034562v1	eboVir3_ncbiGene	start_codon	4479	4481	0.000000	+	.	gene_id "VP40"; transcript_id "VP40"; 
KM034562v1	eboVir3_ncbiGene	CDS	4479	5456	0.000000	+	0	gene_id "VP40"; transcript_id "VP40"; 
KM034562v1	eboVir3_ncbiGene	stop_codon	5457	5459	0.000000	+	.	gene_id "VP40"; transcript_id "VP40"; 
KM034562v1	eboVir3_ncbiGene	exon	4390	5894	0.000000	+	.	gene_id "VP40"; transcript_id "VP40"; 
KM034562v1	eboVir3_ncbiGene	start_codon	6039	6041	0.000000	+	.	gene_id "GP"; transcript_id "GP"; 
KM034562v1	eboVir3_ncbiGene	CDS	6039	6920	0.000000	+	0	gene_id "GP"; transcript_id "GP"; 
KM034562v1	eboVir3_ncbiGene	exon	5900	6920	0.000000	+	.	gene_id "GP"; transcript_id "GP"; 
KM034562v1	eboVir3_ncbiGene	CDS	6923	8065	0.000000	+	0	gene_id "GP"; transcript_id "GP"; 
KM034562v1	eboVir3_ncbiGene	stop_codon	8066	8068	0.000000	+	.	gene_id "GP"; transcript_id "GP"; 
KM034562v1	eboVir3_ncbiGene	exon	6923	8305	0.000000	+	.	gene_id "GP"; transcript_id "GP"; 
KM034562v1	eboVir3_ncbiGene	start_codon	6039	6041	0.000000	+	.	gene_id "sGP"; transcript_id "sGP"; 
KM034562v1	eboVir3_ncbiGene	CDS	6039	7130	0.000000	+	0	gene_id "sGP"; transcript_id "sGP"; 
KM034562v1	eboVir3_ncbiGene	stop_codon	7131	7133	0.000000	+	.	gene_id "sGP"; transcript_id "sGP"; 
KM034562v1	eboVir3_ncbiGene	exon	5900	8305	0.000000	+	.	gene_id "sGP"; transcript_id "sGP"; 
KM034562v1	eboVir3_ncbiGene	start_codon	6039	6041	0.000000	+	.	gene_id "ssGP"; transcript_id "ssGP"; 
KM034562v1	eboVir3_ncbiGene	CDS	6039	6922	0.000000	+	0	gene_id "ssGP"; transcript_id "ssGP"; 
KM034562v1	eboVir3_ncbiGene	exon	5900	6922	0.000000	+	.	gene_id "ssGP"; transcript_id "ssGP"; 
KM034562v1	eboVir3_ncbiGene	CDS	6924	6930	0.000000	+	1	gene_id "ssGP"; transcript_id "ssGP"; 
KM034562v1	eboVir3_ncbiGene	stop_codon	6931	6933	0.000000	+	.	gene_id "ssGP"; transcript_id "ssGP"; 
KM034562v1	eboVir3_ncbiGene	exon	6924	8305	0.000000	+	.	gene_id "ssGP"; transcript_id "ssGP"; 
KM034562v1	eboVir3_ncbiGene	start_codon	8509	8511	0.000000	+	.	gene_id "VP30"; transcript_id "VP30"; 
KM034562v1	eboVir3_ncbiGene	CDS	8509	9372	0.000000	+	0	gene_id "VP30"; transcript_id "VP30"; 
KM034562v1	eboVir3_ncbiGene	stop_codon	9373	9375	0.000000	+	.	gene_id "VP30"; transcript_id "VP30"; 
KM034562v1	eboVir3_ncbiGene	exon	8288	9740	0.000000	+	.	gene_id "VP30"; transcript_id "VP30"; 
KM034562v1	eboVir3_ncbiGene	start_codon	10345	10347	0.000000	+	.	gene_id "VP24"; transcript_id "VP24"; 
KM034562v1	eboVir3_ncbiGene	CDS	10345	11097	0.000000	+	0	gene_id "VP24"; transcript_id "VP24"; 
KM034562v1	eboVir3_ncbiGene	stop_codon	11098	11100	0.000000	+	.	gene_id "VP24"; transcript_id "VP24"; 
KM034562v1	eboVir3_ncbiGene	exon	9885	11518	0.000000	+	.	gene_id "VP24"; transcript_id "VP24"; 
KM034562v1	eboVir3_ncbiGene	start_codon	11581	11583	0.000000	+	.	gene_id "L"; transcript_id "L"; 
KM034562v1	eboVir3_ncbiGene	CDS	11581	18216	0.000000	+	0	gene_id "L"; transcript_id "L"; 
KM034562v1	eboVir3_ncbiGene	stop_codon	18217	18219	0.000000	+	.	gene_id "L"; transcript_id "L"; 
KM034562v1	eboVir3_ncbiGene	exon	11501	18282	0.000000	+	.	gene_id "L"; transcript_id "L";