Mercurial > repos > artbio > sambamba
diff test-data/c1215_fixmate_region-filtered.sam @ 2:7ad3484aa5db draft
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sambamba commit ea1ce99d707fcf2d64f6f2cd96fdd1754f344df1"
| author | artbio |
|---|---|
| date | Thu, 30 Dec 2021 02:06:08 +0000 |
| parents | 6195f15d4541 |
| children |
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--- a/test-data/c1215_fixmate_region-filtered.sam Mon May 25 17:10:17 2020 -0400 +++ b/test-data/c1215_fixmate_region-filtered.sam Thu Dec 30 02:06:08 2021 +0000 @@ -1,5 +1,5 @@ @HD VN:1.3 SO:coordinate -@PG ID:sambamba CL:view -h -t 1 -f sam -o /tmp/tmpfvgji5f3/files/2/1/d/dataset_21dea8eb-5b79-402e-9a05-26eaacdbcb22.dat input.bam AL096846:1000-5000 VN:1.0 +@PG ID:sambamba CL:view -h -t 1 -f sam -o /tmp/tmp1mtgiw55/files/7/e/8/dataset_7e81fe9d-8d41-427b-b591-ac666118bdc0.dat input.bam AL096846:1000-5000 VN:1.0 AL096846_966_1145_3fe 163 AL096846 966 60 35M = 1111 180 TAGTTTCATACTAATAAAGACGATTGTTTACTTTA <<<<<<99<<;<<<<<<<<<<<;<<<<<<<:<<:: XT:A:U NM:i:0 X0:i:1 X1:i:0 XM:i:0 XO:i:0 XG:i:0 MD:Z:35 AL096846_966_1131_e80 163 AL096846 966 60 35M = 1097 166 TAGTTTCATACTAATAAAGACGATTGTTTACTTTA <<<<<;<<<<<<<<<<3<<<<<<<<<;7;<;::5. XT:A:U NM:i:0 X0:i:1 X1:i:0 XM:i:0 XO:i:0 XG:i:0 MD:Z:35 AL096846_861_1000_1bf6 83 AL096846 966 60 35M = 861 -140 TATTTTCATACTAATAAAGACGATTGTTTACTTTA 84&:&<<<<<<:7<<<<<<<<<<<<<<<<<<<<<< XT:A:U NM:i:1 X0:i:1 X1:i:0 XM:i:1 XO:i:0 XG:i:0 MD:Z:2G32