Mercurial > repos > artbio > sequence_format_converter
annotate test-data/sort.py @ 2:f1d59113125a draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sequence_format_converter commit e045004f4c0469cf069d76988afb31f51c33fd4e
author | artbio |
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date | Tue, 20 Feb 2018 12:13:40 -0500 |
parents | a8aacccd79a3 |
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a8aacccd79a3
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sequence_format_converter commit d6ef80f9db43eae4f58b33f58b5ef6f8209907db
artbio
parents:
diff
changeset
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1 import sys |
a8aacccd79a3
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sequence_format_converter commit d6ef80f9db43eae4f58b33f58b5ef6f8209907db
artbio
parents:
diff
changeset
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2 |
a8aacccd79a3
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sequence_format_converter commit d6ef80f9db43eae4f58b33f58b5ef6f8209907db
artbio
parents:
diff
changeset
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3 F = open(sys.argv[1], 'r') |
a8aacccd79a3
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sequence_format_converter commit d6ef80f9db43eae4f58b33f58b5ef6f8209907db
artbio
parents:
diff
changeset
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4 lines = F.readlines() |
a8aacccd79a3
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sequence_format_converter commit d6ef80f9db43eae4f58b33f58b5ef6f8209907db
artbio
parents:
diff
changeset
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5 lines = [line[:-1] for line in lines] |
a8aacccd79a3
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sequence_format_converter commit d6ef80f9db43eae4f58b33f58b5ef6f8209907db
artbio
parents:
diff
changeset
|
6 for line in sorted(lines): |
a8aacccd79a3
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sequence_format_converter commit d6ef80f9db43eae4f58b33f58b5ef6f8209907db
artbio
parents:
diff
changeset
|
7 print(line) |
a8aacccd79a3
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sequence_format_converter commit d6ef80f9db43eae4f58b33f58b5ef6f8209907db
artbio
parents:
diff
changeset
|
8 F.close() |