Mercurial > repos > artbio > small_rna_signatures
diff overlapping_reads.py @ 11:8d3ca9652a5b draft
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/small_rna_signatures commit 8691f2575cacd71c971338658198a1324e5f9370"
author | artbio |
---|---|
date | Sat, 23 Oct 2021 22:55:19 +0000 |
parents | 07771982ef9b |
children | 124f404b0fe7 |
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--- a/overlapping_reads.py Tue Jan 07 06:59:56 2020 -0500 +++ b/overlapping_reads.py Sat Oct 23 22:55:19 2021 +0000 @@ -74,7 +74,7 @@ def query_positions(self, bam_object, overlap): all_query_positions = defaultdict(list) - for genomicKey in self.alignement_dic.keys(): + for genomicKey in list(self.alignement_dic): chrom, coord, pol = genomicKey if pol == 'F' and len(self.alignement_dic[(chrom, coord+overlap-1,