Mercurial > repos > artbio > tarfast5
changeset 5:03034755a509 draft default tip
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/tarfast5 commit 617026dab446713793b40d5556aac16180e68eea"
| author | artbio |
|---|---|
| date | Wed, 26 May 2021 23:13:58 +0000 |
| parents | 56b8caf469f3 |
| children | |
| files | tarfast5.xml test-data/F1_filename_mapping.txt test-data/F2_filename_mapping.txt |
| diffstat | 3 files changed, 5 insertions(+), 24 deletions(-) [+] |
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--- a/tarfast5.xml Sat May 22 12:35:41 2021 +0000 +++ b/tarfast5.xml Wed May 26 23:13:58 2021 +0000 @@ -1,4 +1,4 @@ -<tool id="tarfast5" name="tarfast5" version="0.6.0"> +<tool id="tarfast5" name="tarfast5" version="0.6.1"> <description></description> <requirements> <requirement type="package" version="2.6">pigz</requirement> @@ -53,12 +53,12 @@ **What it does** -Creates a tar.gz archive of fast5 (h5) sequences files +Creates a fast5.tar or fast5.tar.gz archive of fast5 (h5) sequences files .. class:: warningmark -This tools follows a "map-reduce" procedure: multiple inputs, that can be arranged as a data collection, -are compressed into a single tar.gz archive. +This tools follows a "map-reduce" procedure: multiple inputs arranged as a +data collection are compressed into a single tar.gz archive. @@ -69,15 +69,6 @@ </help> <citations> - <citation type="doi">10.1093/bioinformatics/btp352</citation> - <citation type="bibtex">@Book{, - title = {Lattice: Multivariate Data Visualization with R}, - author = {Deepayan Sarkar}, - publisher = {Springer}, - address = {New York}, - year = {2008}, - note = {ISBN 978-0-387-75968-5}, - url = {http://lmdvr.r-forge.r-project.org}, - }</citation> + <citation type="doi">10.11578/dc.20180330.1</citation> </citations> </tool>
--- a/test-data/F1_filename_mapping.txt Sat May 22 12:35:41 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,5 +0,0 @@ -02184968-3def-4785-bd81-0bff70a57da4 batch0.fast5 -0335884d-20f0-4b7f-8f1c-ef57cd739ce6 batch0.fast5 -03bd0764-2e1f-4d60-841b-9519ea9d39cb batch0.fast5 -07b9016b-e5db-449f-b161-79f17eae34df batch0.fast5 -02343944-ac7b-41ac-85b9-dd0b040bfd6c batch0.fast5
--- a/test-data/F2_filename_mapping.txt Sat May 22 12:35:41 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,5 +0,0 @@ -03bd0764-2e1f-4d60-841b-9519ea9d39cb batch0.fast5 -02343944-ac7b-41ac-85b9-dd0b040bfd6c batch0.fast5 -02184968-3def-4785-bd81-0bff70a57da4 batch0.fast5 -07b9016b-e5db-449f-b161-79f17eae34df batch0.fast5 -0335884d-20f0-4b7f-8f1c-ef57cd739ce6 batch0.fast5