Mercurial > repos > artbio > wisecondorx

diff test-data/predict_statistics.txt @ 0:bf0ebc9921f2 draft default tip

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/wisecondorx commit b391b0f3348bd86a5c276dc4d3ff9dc98890c115
author artbio
date Sun, 15 Dec 2024 16:37:13 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/predict_statistics.txt	Sun Dec 15 16:37:13 2024 +0000
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+chr	ratio.mean	ratio.median	zscore
+1	0.003256724685060297	0.009032538940713365	1.1604576995182534
+2	0.007728111371764734	0.00879518825265517	3.6168182974192224
+3	0.0057970691646083835	0.007918358867360545	2.2102487208570447
+4	0.0005794303608920617	-0.0038693714215764057	0.3050780556626696
+5	-0.013750074657332427	-0.00306199917667051	-5.00766851062217
+6	0.00293681601872286	-0.0016253998352964258	0.9407744372804929
+7	-0.0066155513952186815	-0.007596035725320216	-1.3291500169147508
+8	-0.009253570570903735	-0.01001300559828008	-2.3586673175031008
+9	-0.004174118616434959	-0.0024356973032108246	-0.7243064497148664
+10	-0.005266146751525984	0.0028177250094220192	-1.0963168057162755
+11	-0.0010682214397647377	-0.012687471128064745	-0.25403103304752794
+12	-0.006720586939014568	-0.007785953193232591	-1.7313975674091997
+13	0.009139617144346813	0.002351198145606662	2.7174009747784944
+14	0.004617644740226149	0.0035058727944338825	1.4966978929197126
+15	0.0021565565774295426	-0.005083704704282363	0.5800013406347537
+16	0.0009244703405124733	0.007301717962691849	0.20870556732386122
+17	0.01982791519920036	0.006869817773389827	3.1146698354398854
+18	0.020898589066626748	0.009665993221586318	2.845910113450034
+19	-0.000657740980105667	0.0016192329112033454	-0.08006761423301532
+20	0.003446546608787667	0.002058925822068644	0.5033887759993748
+21	-0.005290652555760193	-0.011028957124213846	-0.5341417465937656
+22	-0.017713587100928845	-0.0327155577009055	-1.6790692284983704
+X	-0.013378674115274611	-0.015072799437654107	-2.6107602961602137
+Gender based on --yfrac (or manually overridden by --gender): F
+Number of reads: 2081160
+Standard deviation of the ratios per chromosome: 0.00932
+Median segment variance per bin (doi: 10.1093/nar/gky1263): 0.0008
+Copy number profile abnormality (CPA) score (doi: 10.1186/s13073-020-00735-4): 2.32398