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diff test-data/input-se-inline.fastqsanger @ 0:af879fc0d734 draft

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author avowinkel
date Fri, 26 Jun 2015 16:48:45 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/input-se-inline.fastqsanger	Fri Jun 26 16:48:45 2015 -0400
@@ -0,0 +1,44 @@
+@HWI-ST397:425:C563WACXX:1:1101:3568:2226 1:N:0:
+CCACTCATGCATAGAGAGTGCTGACATAGAGCAACAGATTTTAAGTTCCTTATTACTTTGCTAAGCCTAGTGGCATTGTTGGAATTTCAGCACTAGAATGG
++
+@@@DDBD;DDACFH@GDD3A?<@@AFIGCEH@3CDCFIIGIIEBHFIGGHG9FC@FHIIHEEFIFFHHGG=CCEGCHBECHFEEED;C@DCCCC:CCCCCA
+@HWI-ST397:425:C563WACXX:1:1101:3702:2227 1:N:0:
+TAGCAGTGCATTGCACAATTGTAGCTTAGGGTTGCTTATGTGATAGTTCTATTATGATGATATGATCTTGGTATGTAATTATGCAAGATCGGAAGAGCGGT
++
+@CCFFFFFHHHHHJJJJJJJJHJJJJJJIJJFHIIIJIJIBFDHEHIIGJGIJFIIGIJIJJJJIJJJJJJHIIJJHGJJJJJJJJHHHHHFFFDEEEDDB
+@HWI-ST397:425:C563WACXX:1:1101:3652:2228 1:N:0:
+ACTGCGATTGCATTCCCAAAATCAAAAGAGTGGGATCATGCAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGTCTTCTGCT
++
+@B@FDFFFHHHHHJJIJIIJJJJJJJJIGG:EGGGJJJCGEHIJIGGGIIIGAEEGIAHHFHG@DDBE:@CEDBDBDBDD><BCBDDCDDDD9@<BCCCCD
+@HWI-ST397:425:C563WACXX:1:1101:3631:2229 1:N:0:
+CCTTGCCATTTGCATTGCTGAGTGTTTCAGTTTTTTATGCAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGTCTTCTGCTT
++
+CCCFFFFFHHHHGJJJJJJJIJFEEJJJJJIIIIJJIIJJJJIJJJJJGGGHJFJJ5AEHHJHHHFFFFFFDDDDDBDB@BDDDBDDDDDD>BDDAC@CCC
+@HWI-ST397:425:C563WACXX:1:1101:3672:2229 1:N:0:
+GCAAGCCATTGCATGACTACTTAACGGGGGGATTCACCGCAAATACTACCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATCCACCGTGCA
++
+@@@FFFFFHHGHHJIJJJJJJJIJIJIJJJDBBDDDDDDDDDDDDDDDDDDDCCDCDDDEEEEDDDDBD>BDDDDCCCDDDEDDDDDDDCCDDDCDDDDDD
+@HWI-ST397:425:C563WACXX:1:1101:3742:2234 1:N:0:
+GCAAGCCATTGCATGAATTTTTCCTCTTGCAATGTATGAATTTTTTCCAGCAATGCAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGT
++
+CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJHJJJHIIJJJJJJJJJIJJJJJJJJJJJJIJJJJIJJJJDHF@DDECEEDDDDDDDDDDDDB@BBDDDDDD
+@HWI-ST397:425:C563WACXX:1:1101:3538:2245 1:N:0:
+GGAAGACATTGCATGTCCTTTTGATGAGATTGATGTAAATGAAGTTAGGGATGCAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTAT
++
+CCCFFFFFHHHHHJJHIJJJJJJIJJJJIJJJIJJGGGJJJIIJIIEIJJIGIHIJJJJJJJIJJJJJJJBHFFFEFFDDEEDDDDDBD:?BBDDDDDDDC
+@HWI-ST397:425:C563WACXX:1:1101:3974:2048 1:N:0:
+NACGTGCCTTGCATTGTTTGGTTTGATCCATTAAAAATAGAATGCAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGTCTTC
++
+#1=DDDDFHHHHFJJJHIJIJFGHIIIJJJJIIIIJJEIIIJGIGIJJIGDGIGIGGHGII;AAEHEFFFFECECCBDBB?<B35>DDB??ACDDB0<AB:
+@HWI-ST397:425:C563WACXX:1:1101:3920:2053 1:N:0:
+NAAGTGTGCATCAACTATCTCAAACACAATTTGTATCCAAAACCATCATTCTAACATGCAAGGATCAATATATGACATCTCATTACTCACAGCCGACCATG
++
+#1=DDFDFHHHHHJJJJJJJJIJJJJJJJJJJJGIIJJIIJJJJJJJIJJIJJJJIJJJJJJJGIJJJJJJJJJIHJJHHHHHHFFFFFFEEDDDDDDDDD
+@HWI-ST397:425:C563WACXX:1:1101:3945:2061 1:Y:0:
+NCTTGGTGCATCAAAAACTCCGGGATCCTCGGGGCAAATGAAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGTCTTCTGCT
++
+#08@9@@@@@@??########################################################################################
+@HWI-ST397:425:C563WACXX:1:1101:3801:2062 1:N:0:
+NACTGGTGCATGTATTAGTTATGTAGGATTTAGTAATGCAGGGTTTAATTATGCAAGTATTAGTTATGCAAGATCGGAAGAGCGGTTCAGCAGGAATGCCG
++
+#1:DDDFFHHHFFIIIEGCEEFHEEHGGFEHIICFHHGHEHGG1CFGGEHIGDHIIIBEHIIIGGHIIIIIIGGGFHIGFFHEDC=ABCCCCBB?B@CCC@