view process_radtags_rename.sh @ 0:af879fc0d734 draft

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author avowinkel
date Fri, 26 Jun 2015 16:48:45 -0400
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children 228d0cbc14f9
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#!/bin/bash

EXT=$1

mv output/process_radtags.log output/Report.log
mv output/*.discards output/Discards.${EXT}.discards
mkdir splits
mv output/sample_* splits
#ls -lah output splits
for i in splits/*.fq; do mv "$i" "${i/.fq}".${EXT}; done